BLASTX nr result

ID: Chrysanthemum22_contig00028309 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028309
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97518.1| CMP/dCMP deaminase, zinc-binding [Cynara carduncu...    82   4e-15
ref|XP_023748203.1| tRNA(adenine(34)) deaminase, chloroplastic-l...    59   4e-07

>gb|KVH97518.1| CMP/dCMP deaminase, zinc-binding [Cynara cardunculus var. scolymus]
          Length = 1326

 Score = 81.6 bits (200), Expect = 4e-15
 Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 15/109 (13%)
 Frame = +2

Query: 158 LPRFSITPSFVSNRLRQSTLINFAPSRRFVNHGRRIREVCDGNSSRFSVTGFERNS-YER 334
           LPR  I PSF+ N LRQSTLI F+PS+R + HGRR R+ C+GNS+  S+T  +RN+ YE+
Sbjct: 66  LPR--IYPSFLCNGLRQSTLIQFSPSKRLIFHGRR-RQSCNGNSAFSSLTDSDRNNYYEK 122

Query: 335 LRK--------LGNSRYVCRVLEDE------SSESGDEFVDQVEVLLDL 439
           L+         L   RY C  LED+      S+E  D+ VD VE+LLDL
Sbjct: 123 LQSFKRGKQGGLRKGRYGCWALEDKRKEQFFSNEIDDDHVDDVEILLDL 171


>ref|XP_023748203.1| tRNA(adenine(34)) deaminase, chloroplastic-like [Lactuca sativa]
          Length = 1192

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
 Frame = +2

Query: 137 LVYYNNHLPRFSITPSFVSNRLRQSTLINFAPSRRFVNHGRRIREVCD--GNSSRFSVTG 310
           L+Y  N LPR  I P ++ N LRQSTLI F+PS+R   HG R R+ C+    S   S+T 
Sbjct: 62  LIY--NRLPR--INPRYLCNGLRQSTLIQFSPSKRLTFHGSR-RQSCNTTSGSGFSSLTD 116

Query: 311 FERN-------SYERLRKLGNSRYVCRVLEDE------SSESGDEFVDQVEVLLDL 439
            +R        S++  RKLG  R  C  +ED+      S+   D+ ++ VE+LLDL
Sbjct: 117 SDRKYYYEKLYSFKEKRKLGKGR--CLGIEDKKKTQSFSNAIEDDCLNDVEILLDL 170


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