BLASTX nr result

ID: Chrysanthemum22_contig00028307 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028307
         (901 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]     107   4e-24

>gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]
          Length = 216

 Score =  107 bits (266), Expect = 4e-24
 Identities = 72/166 (43%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
 Frame = -3

Query: 647 SVNDDEHVPLPKKRKVCXXXXXXXXXXXXXXXXXXTAFTYPLKPVCHIHYLYLPVVQNKE 468
           SVN+ + VPLP+KRK C                  TAFTYPLKPVC+I ++ +P+   K 
Sbjct: 47  SVNN-QRVPLPRKRKACFFLSYFSFLILYLAFLLVTAFTYPLKPVCNISHI-IPLDGAKT 104

Query: 467 TTYMTNLSLEFHFINRNKLIPISYDS-LNITIYYLPSPNEIIYFANSIAPGFSQPTGNSN 291
                NL LEF  INRN LI +SYDS LNI++YY+ S N + YFA + APGF Q      
Sbjct: 105 ENESFNLVLEF--INRNPLISVSYDSFLNISVYYISSSN-VSYFAETTAPGFDQQNLKQT 161

Query: 290 WRVIYVPAPALSSLLQLQGT-----LRVNLEFDARFHCRFLCKHIR 168
              +++PAP  S L ++Q T     L VNL+F   F C   CK  R
Sbjct: 162 EVTVHIPAPESSQLSEMQNTSNPIGLLVNLDFIVGFRC-ISCKEKR 206


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