BLASTX nr result

ID: Chrysanthemum22_contig00028280 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028280
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95270.1| G-protein beta WD-40 repeat-containing protein [C...    69   4e-11
ref|XP_021969236.1| WD repeat-containing protein 44-like [Helian...    67   3e-10
ref|XP_023745633.1| WD repeat-containing protein 44-like isoform...    65   1e-09
ref|XP_023745632.1| WD repeat-containing protein 44-like isoform...    65   1e-09

>gb|KVH95270.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 708

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 12/82 (14%)
 Frame = +1

Query: 1   DGDEDCVDDFVGEIREDSNVVLDGKIGDASLG-LSRQPSLSDWSSKGVDLV--------- 150
           D +E+  DDFV EIRED+ +V      D   G L RQPSL DWS+KG++LV         
Sbjct: 72  DPEEEYEDDFVDEIREDTMLVKS----DFQDGFLYRQPSLCDWSNKGMELVTSGSVKDHL 127

Query: 151 -VKTGDWDESGEE-VVKRSFDF 210
            VKTG+WDESGE+ ++KRSFDF
Sbjct: 128 VVKTGNWDESGEDMLMKRSFDF 149


>ref|XP_021969236.1| WD repeat-containing protein 44-like [Helianthus annuus]
 ref|XP_021969238.1| WD repeat-containing protein 44-like [Helianthus annuus]
 ref|XP_021969239.1| WD repeat-containing protein 44-like [Helianthus annuus]
 gb|OTG21992.1| putative dynein regulator LIS1 [Helianthus annuus]
          Length = 699

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = +1

Query: 1   DGDEDCVDDFVGEIREDSNVVLDGKIGDASLGLSRQPSLSDWSSKGVDLVVKTGDWDESG 180
           +G +   D F+ EIR+   VV    +      L RQPSL+DWSSK ++LV  + +WDESG
Sbjct: 76  EGYDPYEDGFIDEIRDSGEVVSRENLNTQDEVLCRQPSLTDWSSKTMELVTSSVNWDESG 135

Query: 181 EEV-VKRSFDFSAD 219
           E+V VK SFDF A+
Sbjct: 136 EDVLVKTSFDFGAE 149


>ref|XP_023745633.1| WD repeat-containing protein 44-like isoform X2 [Lactuca sativa]
 gb|PLY64866.1| hypothetical protein LSAT_3X12220 [Lactuca sativa]
          Length = 712

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +1

Query: 1   DGDEDCVDDFVGEIREDSNVVLDGKIGDASLGLSRQPSLSDWSSKGVDLV------VKTG 162
           +G+E+  +DF+ EI ED+ ++           L RQPSLS WS+  ++L+      VK G
Sbjct: 72  EGEEEYDNDFIDEINEDTVLISPQNSDFQDRILCRQPSLSIWSNIAMELIPSGLNRVKIG 131

Query: 163 DWDESGEEV-VKRSFDFSADG 222
           +WDESGE++ +KRSFDF  DG
Sbjct: 132 NWDESGEDILIKRSFDFHEDG 152


>ref|XP_023745632.1| WD repeat-containing protein 44-like isoform X1 [Lactuca sativa]
          Length = 719

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +1

Query: 1   DGDEDCVDDFVGEIREDSNVVLDGKIGDASLGLSRQPSLSDWSSKGVDLV------VKTG 162
           +G+E+  +DF+ EI ED+ ++           L RQPSLS WS+  ++L+      VK G
Sbjct: 79  EGEEEYDNDFIDEINEDTVLISPQNSDFQDRILCRQPSLSIWSNIAMELIPSGLNRVKIG 138

Query: 163 DWDESGEEV-VKRSFDFSADG 222
           +WDESGE++ +KRSFDF  DG
Sbjct: 139 NWDESGEDILIKRSFDFHEDG 159


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