BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028182
         (2119 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02971.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...  1089   0.0  
ref|XP_023755914.1| probable RNA-dependent RNA polymerase 1 [Lac...  1067   0.0  
gb|KVG80506.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...  1067   0.0  
ref|XP_021977450.1| probable RNA-dependent RNA polymerase 1 [Hel...  1061   0.0  
ref|XP_021977396.1| probable RNA-dependent RNA polymerase 1 [Hel...  1060   0.0  
gb|OTG18488.1| putative RNA-dependent RNA polymerase 1 [Helianth...  1060   0.0  
ref|XP_023735459.1| LOW QUALITY PROTEIN: probable RNA-dependent ...  1012   0.0  
ref|XP_021977395.1| probable RNA-dependent RNA polymerase 1 [Hel...  1004   0.0  
gb|OTG18486.1| putative RNA-dependent RNA polymerase, eukaryotic...  1004   0.0  
gb|OTG18548.1| putative RNA-dependent RNA polymerase, eukaryotic...  1004   0.0  
gb|PLY72463.1| hypothetical protein LSAT_2X70281 [Lactuca sativa]     907   0.0  
gb|KVG42498.1| RNA-dependent RNA polymerase, eukaryotic-type [Cy...   897   0.0  
gb|PIM98069.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...   877   0.0  
ref|XP_011075687.1| probable RNA-dependent RNA polymerase 1 [Ses...   867   0.0  
ref|XP_015895367.1| PREDICTED: RNA-dependent RNA polymerase 1 [Z...   858   0.0  
emb|CDP05596.1| unnamed protein product [Coffea canephora]            857   0.0  
gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [S...   847   0.0  
ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus...   847   0.0  
gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]         847   0.0  
ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus...   852   0.0  

>gb|KVI02971.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1167

 Score = 1089 bits (2816), Expect = 0.0
 Identities = 544/725 (75%), Positives = 616/725 (84%), Gaps = 19/725 (2%)
 Frame = -1

Query: 2119 TRAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            +RAYA+VQFTTRE+VDYI+DLAS +RLWYG+SYLK WE D D+VQKPRH+ALD+DG+TLH
Sbjct: 95   SRAYAKVQFTTRERVDYILDLASRKRLWYGSSYLKAWEVDTDIVQKPRHFALDMDGITLH 154

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVSK+ L VL  MRN+ VKFGFG R+LYF V+    SYKLQLSY+NIWQVQ HRPRG
Sbjct: 155  FGCQVSKETLQVLCKMRNSVVKFGFGLRRLYFNVSYPTISYKLQLSYDNIWQVQLHRPRG 214

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            L + FLVIQL+GAPRI +KVE+N+F++YRE PDDQWVRATDF+ S SIGQSSHLCLELS 
Sbjct: 215  LAASFLVIQLYGAPRISQKVEDNIFNYYREIPDDQWVRATDFSPSFSIGQSSHLCLELSH 274

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
             V++ NL  YFPYYEES+ PFNL  GHSFSQ  D  LVPIVGPARG  LPY I+FK+C+L
Sbjct: 275  GVEIPNLGRYFPYYEESNRPFNLVTGHSFSQNLD--LVPIVGPARGSNLPYKIIFKVCSL 332

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGPVLD+ F+ELLDP RR  D+ASI+YVL+KL Y KDC Y+PV+WIT+EYR+N+
Sbjct: 333  VQHGCIPGPVLDANFFELLDPARR--DIASIDYVLDKLLYQKDCIYDPVRWITQEYRRNN 390

Query: 1222 RLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDE 1043
            RLR P ISLD  AGLVYVRRVQITPSKVYFCGPE+NVSNRVLR+++ YID+FLRVSF+DE
Sbjct: 391  RLRTPTISLD--AGLVYVRRVQITPSKVYFCGPEVNVSNRVLRNFATYIDDFLRVSFLDE 448

Query: 1042 ELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAW 917
            ELEKLYSTDL PRA +++ ES+TGIY RIL IL+DG                     S W
Sbjct: 449  ELEKLYSTDLVPRATNRSEESRTGIYKRILSILRDGIVIGCKKFEFLAFSSSQLRDNSTW 508

Query: 916  MFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIV 737
            MFA++  + AA IREWMG F+ IKNVAKYAARLGQSFGSSKESLSVA YEVEKIPD+E+V
Sbjct: 509  MFASSNTLTAADIREWMGKFNSIKNVAKYAARLGQSFGSSKESLSVAPYEVEKIPDIEVV 568

Query: 736  RNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLR 557
            R GTKYVFSDGIGKIS  FA RVS KCGY FIPSAFQIRY GYKGVVA+DPTS  KLSLR
Sbjct: 569  RGGTKYVFSDGIGKISXEFASRVSJKCGYDFIPSAFQIRYGGYKGVVAIDPTSSKKLSLR 628

Query: 556  KSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILK 377
             SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLSTLGVRD+VFE+KQKEAVDLL+AIL 
Sbjct: 629  TSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLSTLGVRDHVFEKKQKEAVDLLNAILX 688

Query: 376  EPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFV 197
            EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEPFLSMMLQVFRA KLLE+RTK RIFV
Sbjct: 689  EPMKAEEALELMSPGENTNILKEMLACGYKPNAEPFLSMMLQVFRATKLLELRTKARIFV 748

Query: 196  PKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCL 17
            P+GRSMMGCLDETRTL YGEVFVQ+S + +R L DD SG  SN  + V GKVVVAKNPCL
Sbjct: 749  PRGRSMMGCLDETRTLAYGEVFVQFSCSRRRVLGDDFSGGSSNSCRIVTGKVVVAKNPCL 808

Query: 16   HPGDV 2
            HPGDV
Sbjct: 809  HPGDV 813


>ref|XP_023755914.1| probable RNA-dependent RNA polymerase 1 [Lactuca sativa]
 ref|XP_023755915.1| probable RNA-dependent RNA polymerase 1 [Lactuca sativa]
 gb|PLY91365.1| hypothetical protein LSAT_8X35321 [Lactuca sativa]
          Length = 1119

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 537/729 (73%), Positives = 616/729 (84%), Gaps = 23/729 (3%)
 Frame = -1

Query: 2119 TRAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            +R+YA+VQF TRE+V+YIIDLA+++RLW+G +YLK +  D D+ Q+P+ +A +++G T+H
Sbjct: 44   SRSYAKVQFKTRERVEYIIDLANNKRLWFGRTYLKAFINDHDIEQRPKQFAFEMEGATVH 103

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVSK+ L VL  M+N SVKFGFG R+LYF V+    SYKLQLSYENIWQVQ  R RG
Sbjct: 104  FGCQVSKETLHVLSKMKNVSVKFGFGLRRLYFVVSYPTTSYKLQLSYENIWQVQLRRSRG 163

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
              ++F+VIQL+GAPRI++KVE+N+ SFY E PDDQWVRATDFT S+SIGQSSHLCLEL  
Sbjct: 164  NNAKFIVIQLYGAPRIYQKVEDNIHSFYSEVPDDQWVRATDFTPSSSIGQSSHLCLELPL 223

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
             VDL NL  YFPYYE++H  F L  G SFS+  D  LVPIVGP R   LPYNIVFKIC L
Sbjct: 224  GVDLPNLAHYFPYYEDNHRQFQLVTGQSFSRNLD--LVPIVGPTR--YLPYNIVFKICTL 279

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGP+L++ FYELLDPQRR  D+ SIEYVLEKL+YLK+ CY+PV+WITEEY+ N+
Sbjct: 280  VQHGCIPGPLLNATFYELLDPQRR--DIGSIEYVLEKLFYLKESCYDPVRWITEEYKNNN 337

Query: 1222 RLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDE 1043
            RLR+PAISLD  +GLVYVRRVQITPSKVYFCGPE+NVSNRVLRHY+DYIDNF+RVSF+DE
Sbjct: 338  RLRSPAISLD--SGLVYVRRVQITPSKVYFCGPEVNVSNRVLRHYADYIDNFIRVSFLDE 395

Query: 1042 ELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAW 917
            ELEKLYSTDLSPRA +    +KT IYTRIL +LK+G                     SAW
Sbjct: 396  ELEKLYSTDLSPRANNLTGVNKTAIYTRILSVLKNGIVIGNKKFEFLAFSSSQLRDNSAW 455

Query: 916  MFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIV 737
            MFA+TGR+NAA IREWMGDFS IKNVAKYAARLGQSFGSSKESLSVAQ+EV KI DVE++
Sbjct: 456  MFASTGRINAADIREWMGDFSSIKNVAKYAARLGQSFGSSKESLSVAQHEVAKIADVEVI 515

Query: 736  RNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLR 557
            RNG +Y+FSDGIGKISA FA+RVSKKCGY FIPSAFQIRY GYKGVVAVDPTS MKLSLR
Sbjct: 516  RNGVRYIFSDGIGKISAEFAKRVSKKCGYDFIPSAFQIRYGGYKGVVAVDPTSTMKLSLR 575

Query: 556  KSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILK 377
             SM KF+SDNTKLD+LAISKYQPCYMNRQLITLLSTLGV+D+VFE+KQKE VDLLDA+L+
Sbjct: 576  NSMCKFESDNTKLDVLAISKYQPCYMNRQLITLLSTLGVKDHVFEKKQKEVVDLLDAVLR 635

Query: 376  EPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFV 197
            EP+KAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTRIFV
Sbjct: 636  EPMKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTRIFV 695

Query: 196  PKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHS----GMMSNELKTVRGKVVVAK 29
             KGR+MMGCLDETRTLEYGEVFV +SGAG+RPL+D+ S    G+   + K V GKVVVAK
Sbjct: 696  SKGRAMMGCLDETRTLEYGEVFVHFSGAGRRPLNDNGSSSSGGVGGYKSKIVVGKVVVAK 755

Query: 28   NPCLHPGDV 2
            NPCLHPGDV
Sbjct: 756  NPCLHPGDV 764


>gb|KVG80506.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 1137

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 536/725 (73%), Positives = 607/725 (83%), Gaps = 19/725 (2%)
 Frame = -1

Query: 2119 TRAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            +RAYA+VQFTTREKVDYI+DLA+ + LWYG+S+LK WE D D+VQKPR +ALD+DG+TLH
Sbjct: 78   SRAYAKVQFTTREKVDYILDLANRKGLWYGSSFLKAWEVDTDIVQKPRQFALDMDGITLH 137

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVSK+ L VL  MRN+ VKFGFG R+LYF V+    SY LQLSY+NIWQVQ HRPRG
Sbjct: 138  FGCQVSKETLQVLCKMRNSMVKFGFGLRRLYFNVSYPTTSYNLQLSYDNIWQVQLHRPRG 197

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            L + FLVIQL+GAPRIF+KVE+N  + YRE  DDQWVRATDF+ S SIGQSSHLCLELS 
Sbjct: 198  LAASFLVIQLYGAPRIFQKVEDNNLNDYREIRDDQWVRATDFSPSFSIGQSSHLCLELSH 257

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
             V++ NL  YFPYYEES+ PFNL  GHSFSQ  D  LVP VGPARG  LPY I+FK+C+L
Sbjct: 258  GVEIPNLXXYFPYYEESNXPFNLVTGHSFSQNLD--LVPTVGPARGSNLPYKIIFKVCSL 315

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGPVLD+ F+ELLDP RR  D+ASI+ VL+KL Y KDC Y+PV+WIT+EYR+N+
Sbjct: 316  VQHGCIPGPVLDANFFELLDPARR--DIASIDXVLDKLLYQKDCIYDPVRWITQEYRRNN 373

Query: 1222 RLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDE 1043
            RLR   ISLD  AGLVYVRRVQITPSKVYFCGPE+NVSNRVLR++  YID+FLRVSF+DE
Sbjct: 374  RLRXXTISLD--AGLVYVRRVQITPSKVYFCGPEVNVSNRVLRNFXTYIDDFLRVSFLDE 431

Query: 1042 ELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAW 917
            ELEKLYSTDL PRA +++ ES+TGIY RIL IL+DG                     SAW
Sbjct: 432  ELEKLYSTDLXPRATNRSEESRTGIYKRILSILRDGIVIGRKKFEFLAFSSSQLRDNSAW 491

Query: 916  MFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIV 737
            MFA++  + AA IREWMG F+ IKNVAKYAARLGQSFGSSKESL+VA YEVEKIPD+E+V
Sbjct: 492  MFASSNILTAADIREWMGKFNSIKNVAKYAARLGQSFGSSKESLNVAPYEVEKIPDIEVV 551

Query: 736  RNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLR 557
            R GTKYVFSDGIGKIS  FA  VS KCGY FIPSAFQIRY GYKGVVA+DPTS  KLSLR
Sbjct: 552  RGGTKYVFSDGIGKISLEFASSVSIKCGYDFIPSAFQIRYGGYKGVVAIDPTSSKKLSLR 611

Query: 556  KSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILK 377
             SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLSTLGVRD+VFE+KQKEAVDLL+AIL 
Sbjct: 612  TSMCKFDSDNTKLDVLAISKYQPCYMNRQJITLLSTLGVRDHVFEKKQKEAVDLLNAILS 671

Query: 376  EPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFV 197
            EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEPFLSMMLQVFRA KLLE+RTKTR FV
Sbjct: 672  EPMKAEEALELMSPGENTNILKEMLACGYKPNAEPFLSMMLQVFRATKLLELRTKTRXFV 731

Query: 196  PKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCL 17
            P+GR MMGCLDETRTLEYGEVFVQ+SG+ +R L DD SG  SN  + V GKVVVAKNPCL
Sbjct: 732  PRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGDDFSGGSSNSCRIVTGKVVVAKNPCL 791

Query: 16   HPGDV 2
            HPGDV
Sbjct: 792  HPGDV 796


>ref|XP_021977450.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1113

 Score = 1061 bits (2744), Expect = 0.0
 Identities = 532/724 (73%), Positives = 611/724 (84%), Gaps = 19/724 (2%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHF 1937
            RAYARVQFTT+ K + I+ LA+ R+LWYG SYLK WEKDMDLVQKPR +A +++GVTLHF
Sbjct: 45   RAYARVQFTTKAKAERILKLANSRQLWYGRSYLKAWEKDMDLVQKPRQFAYEMEGVTLHF 104

Query: 1936 GCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGL 1757
            GCQVSK+ L VL  M  ASVKFGFG RK+YFGV     SYKLQLSYENIWQVQ H PRG 
Sbjct: 105  GCQVSKEKLPVLCKMERASVKFGFGLRKIYFGVPWLDTSYKLQLSYENIWQVQLHCPRGA 164

Query: 1756 TSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSRD 1577
             + +LVIQL+GAPR+++KVE+N  +FY+E PDDQWVR+TDFT S +IGQSSHLC+E+  D
Sbjct: 165  PASYLVIQLYGAPRLYQKVEDNPHNFYKELPDDQWVRSTDFTPSYAIGQSSHLCIEIPHD 224

Query: 1576 VDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            V+  +L  YFPY+EES+ PFNL  G SFSQ SD  LVPIVGP     LP+ +VFKICALV
Sbjct: 225  VEPPDLDRYFPYFEESYHPFNLVPGRSFSQSSD--LVPIVGPLPWCYLPFKVVFKICALV 282

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            QHGCIPGPVLD+ FY LLDPQRR  D+ +IEYV+EKLY+ KDCCY+PV+ ITEEY KN +
Sbjct: 283  QHGCIPGPVLDANFYALLDPQRR--DIEAIEYVMEKLYFSKDCCYDPVRLITEEYLKNKK 340

Query: 1219 LRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEE 1040
            L++PAISLD   GLVYVRRVQITPSKVYFCGPE+NVSNRVLRHY++YIDNFLRVSF+DEE
Sbjct: 341  LKSPAISLD--TGLVYVRRVQITPSKVYFCGPEVNVSNRVLRHYAEYIDNFLRVSFLDEE 398

Query: 1039 LEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAWM 914
            LEKLYSTDL+P+ + +N ES+T IY RIL IL++G                     SAWM
Sbjct: 399  LEKLYSTDLAPK-VGRNGESRTAIYRRILSILRNGISIGGKKFEFLAFSSSQLRDNSAWM 457

Query: 913  FAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIVR 734
            FA+TGR+NAA+IR WMGDFS IKNVAKYAARLGQSFGSSKESLSVAQ+EVE+IPDVEIVR
Sbjct: 458  FASTGRLNAAAIRNWMGDFSSIKNVAKYAARLGQSFGSSKESLSVAQHEVEEIPDVEIVR 517

Query: 733  NGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 554
            +GT+YVFSDGIGKISA FA+RVS KCGY  IPSAFQ+RY GYKGVVAVDPTS MKLSLRK
Sbjct: 518  SGTRYVFSDGIGKISAEFAKRVSSKCGYDIIPSAFQVRYGGYKGVVAVDPTSYMKLSLRK 577

Query: 553  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 374
            SM KF+S NTKLDILA+SKYQPCYMNRQLITLLSTLG+ D++FE+KQ+EAV LLDAIL E
Sbjct: 578  SMCKFESTNTKLDILAVSKYQPCYMNRQLITLLSTLGIPDHIFEKKQREAVCLLDAILVE 637

Query: 373  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 194
            P+KA+EAL+LMSPGENTN+MK MLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTR+FVP
Sbjct: 638  PIKAEEALDLMSPGENTNVMKGMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTRVFVP 697

Query: 193  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCLH 14
             GRSMMGCLDETRTLEYGEVFV YS AG+RPL D++SG+ S + + VRG VVVAKNPCLH
Sbjct: 698  NGRSMMGCLDETRTLEYGEVFVHYSSAGRRPLGDEYSGIGSCKSRIVRGNVVVAKNPCLH 757

Query: 13   PGDV 2
            PGDV
Sbjct: 758  PGDV 761


>ref|XP_021977396.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1120

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 534/725 (73%), Positives = 616/725 (84%), Gaps = 20/725 (2%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWY-GTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            RAYARVQFTT++ ++ I++LA+ R+LWY G SYLK W++D+DLVQKPR +A +++G TLH
Sbjct: 46   RAYARVQFTTKDHMECILNLANSRQLWYDGRSYLKAWKRDIDLVQKPRQFAFEMEGATLH 105

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVSK  LSVL+ M NASVKFGFG RKLYFGV+E+  SY+LQLSYENIWQVQ H PRG
Sbjct: 106  FGCQVSKTSLSVLYEMGNASVKFGFGLRKLYFGVSEFMTSYQLQLSYENIWQVQLHCPRG 165

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            + +RFLVIQL+GAPRI++KVE+N +SF  E  DDQWVRATDFT S +IGQSSHLC+EL  
Sbjct: 166  VGARFLVIQLYGAPRIYQKVEDNPYSFNTELSDDQWVRATDFTPSFAIGQSSHLCIELPH 225

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
            DV+L +L  YFPYYEES+ PFNL  GH+FS+ +D  LVPIVGP +G  LP++IVFKICAL
Sbjct: 226  DVELPDLGCYFPYYEESNHPFNLVTGHNFSKNTD--LVPIVGPTQGYYLPFDIVFKICAL 283

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGPVL+  FY LLDPQRR  D+ SIEYV+EKLY+LK CCY+PV++I EEYR N 
Sbjct: 284  VQHGCIPGPVLNDDFYALLDPQRR--DIESIEYVMEKLYFLKVCCYDPVRFIIEEYRNNK 341

Query: 1222 RLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDE 1043
            +LR+P ISLD   GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVSFVDE
Sbjct: 342  KLRSPTISLD--TGLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVSFVDE 399

Query: 1042 ELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAW 917
            ELEKLYSTDLSPR + Q+  S+TGIY RIL IL++G                     SAW
Sbjct: 400  ELEKLYSTDLSPR-VGQSGVSRTGIYRRILSILRNGIVIGNKKFEFLAFSSSQLRDNSAW 458

Query: 916  MFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIV 737
            MFA+TGRVNAA IR WMGDF  IKNVAKYAARLGQ FGSSKESLSVA+YEVE+IPD++IV
Sbjct: 459  MFASTGRVNAAEIRNWMGDFRSIKNVAKYAARLGQCFGSSKESLSVARYEVEEIPDIKIV 518

Query: 736  RNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLR 557
            RNGT YVFSDGIGKISA  A+RVS+KCGY FIPSAFQIRYAGYKGVVAVDPTS MKLS R
Sbjct: 519  RNGTTYVFSDGIGKISAELAERVSRKCGYDFIPSAFQIRYAGYKGVVAVDPTSFMKLSSR 578

Query: 556  KSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILK 377
            +SM KF+SDNTKLDILA+SKYQPCYMNRQ ITLLSTLG+ D++F+RKQ+EAV LLDAIL 
Sbjct: 579  ESMFKFESDNTKLDILAVSKYQPCYMNRQFITLLSTLGISDHIFQRKQREAVCLLDAILV 638

Query: 376  EPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFV 197
            +P+KA+EAL+LMSPGENTN+MK MLSCGYKPN+EPFLSMMLQVFRA KLLE+RTKTRIFV
Sbjct: 639  DPIKAEEALDLMSPGENTNVMKGMLSCGYKPNSEPFLSMMLQVFRATKLLELRTKTRIFV 698

Query: 196  PKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCL 17
            PKGR+MMGCLDETRTLEYG+VFVQYS AG+RPL D++SG+ S   + V G VVVAKNPCL
Sbjct: 699  PKGRAMMGCLDETRTLEYGQVFVQYSSAGRRPLGDEYSGIGSYRPRIVTGDVVVAKNPCL 758

Query: 16   HPGDV 2
            HPGDV
Sbjct: 759  HPGDV 763


>gb|OTG18488.1| putative RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1132

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 534/725 (73%), Positives = 616/725 (84%), Gaps = 20/725 (2%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWY-GTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            RAYARVQFTT++ ++ I++LA+ R+LWY G SYLK W++D+DLVQKPR +A +++G TLH
Sbjct: 58   RAYARVQFTTKDHMECILNLANSRQLWYDGRSYLKAWKRDIDLVQKPRQFAFEMEGATLH 117

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVSK  LSVL+ M NASVKFGFG RKLYFGV+E+  SY+LQLSYENIWQVQ H PRG
Sbjct: 118  FGCQVSKTSLSVLYEMGNASVKFGFGLRKLYFGVSEFMTSYQLQLSYENIWQVQLHCPRG 177

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            + +RFLVIQL+GAPRI++KVE+N +SF  E  DDQWVRATDFT S +IGQSSHLC+EL  
Sbjct: 178  VGARFLVIQLYGAPRIYQKVEDNPYSFNTELSDDQWVRATDFTPSFAIGQSSHLCIELPH 237

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
            DV+L +L  YFPYYEES+ PFNL  GH+FS+ +D  LVPIVGP +G  LP++IVFKICAL
Sbjct: 238  DVELPDLGCYFPYYEESNHPFNLVTGHNFSKNTD--LVPIVGPTQGYYLPFDIVFKICAL 295

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGPVL+  FY LLDPQRR  D+ SIEYV+EKLY+LK CCY+PV++I EEYR N 
Sbjct: 296  VQHGCIPGPVLNDDFYALLDPQRR--DIESIEYVMEKLYFLKVCCYDPVRFIIEEYRNNK 353

Query: 1222 RLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDE 1043
            +LR+P ISLD   GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVSFVDE
Sbjct: 354  KLRSPTISLD--TGLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVSFVDE 411

Query: 1042 ELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAW 917
            ELEKLYSTDLSPR + Q+  S+TGIY RIL IL++G                     SAW
Sbjct: 412  ELEKLYSTDLSPR-VGQSGVSRTGIYRRILSILRNGIVIGNKKFEFLAFSSSQLRDNSAW 470

Query: 916  MFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIV 737
            MFA+TGRVNAA IR WMGDF  IKNVAKYAARLGQ FGSSKESLSVA+YEVE+IPD++IV
Sbjct: 471  MFASTGRVNAAEIRNWMGDFRSIKNVAKYAARLGQCFGSSKESLSVARYEVEEIPDIKIV 530

Query: 736  RNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLR 557
            RNGT YVFSDGIGKISA  A+RVS+KCGY FIPSAFQIRYAGYKGVVAVDPTS MKLS R
Sbjct: 531  RNGTTYVFSDGIGKISAELAERVSRKCGYDFIPSAFQIRYAGYKGVVAVDPTSFMKLSSR 590

Query: 556  KSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILK 377
            +SM KF+SDNTKLDILA+SKYQPCYMNRQ ITLLSTLG+ D++F+RKQ+EAV LLDAIL 
Sbjct: 591  ESMFKFESDNTKLDILAVSKYQPCYMNRQFITLLSTLGISDHIFQRKQREAVCLLDAILV 650

Query: 376  EPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFV 197
            +P+KA+EAL+LMSPGENTN+MK MLSCGYKPN+EPFLSMMLQVFRA KLLE+RTKTRIFV
Sbjct: 651  DPIKAEEALDLMSPGENTNVMKGMLSCGYKPNSEPFLSMMLQVFRATKLLELRTKTRIFV 710

Query: 196  PKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCL 17
            PKGR+MMGCLDETRTLEYG+VFVQYS AG+RPL D++SG+ S   + V G VVVAKNPCL
Sbjct: 711  PKGRAMMGCLDETRTLEYGQVFVQYSSAGRRPLGDEYSGIGSYRPRIVTGDVVVAKNPCL 770

Query: 16   HPGDV 2
            HPGDV
Sbjct: 771  HPGDV 775


>ref|XP_023735459.1| LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase 1 [Lactuca
            sativa]
          Length = 1112

 Score = 1012 bits (2616), Expect = 0.0
 Identities = 513/729 (70%), Positives = 601/729 (82%), Gaps = 23/729 (3%)
 Frame = -1

Query: 2119 TRAYARVQFTTREKVDYIIDLASHRRL--WYGTSYLKVWEKDMDLVQKPRHYALDVDGVT 1946
            +R+YA+VQFTTRE+V+Y++DLA+H+RL  WY T YLK +  D D++Q+P+ +A +++  T
Sbjct: 44   SRSYAKVQFTTRERVEYVLDLANHKRLRFWYXT-YLKAYVMDRDIIQRPKQFAFEMEDAT 102

Query: 1945 LHFGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRP 1766
            L+FGCQVSK+ L VL  M+N SVKFGFG R+LYF ++     YKLQLSYENI QVQ HR 
Sbjct: 103  LYFGCQVSKENLYVLCMMQNTSVKFGFGLRRLYFVISYSTTCYKLQLSYENICQVQLHRS 162

Query: 1765 RGLTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLEL 1586
             G T++F+VIQL+GAPRIF+KVE ++ ++Y + PDDQW+RATDFT  +SIGQSSHLCLEL
Sbjct: 163  HGNTTKFVVIQLYGAPRIFQKVEEDIHNYYSDIPDDQWIRATDFTPYSSIGQSSHLCLEL 222

Query: 1585 SRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKIC 1409
               V+L NL  YFPYYEE++  F L  GHSFS+  D  LVPIVGP     LPYNIVFKIC
Sbjct: 223  PYGVELPNLSRYFPYYEENNRQFKLMKGHSFSKNLD--LVPIVGPT--FYLPYNIVFKIC 278

Query: 1408 ALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRK 1229
            ALVQHGCIPGP+LDS F+ELLDPQRR   + SIEYVLEKLYY+KDCCY+P++WI +EY+ 
Sbjct: 279  ALVQHGCIPGPLLDSSFFELLDPQRRH--IGSIEYVLEKLYYVKDCCYDPIRWIKDEYKN 336

Query: 1228 NSRLRA-PAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1052
            N+R+R+ PAISLD D  LVYVRR+QITPSKVYFCGPE+NVSNRVLRH++ YIDNF+RVSF
Sbjct: 337  NNRIRSSPAISLDSD--LVYVRRIQITPSKVYFCGPEVNVSNRVLRHFAQYIDNFIRVSF 394

Query: 1051 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------ 926
            +DEELEKLYSTDLSPRA +   +++TGIY RIL +LK+G                     
Sbjct: 395  LDEELEKLYSTDLSPRANNIFGKTRTGIYKRILSVLKNGIVIGNKKFEFLAFSSSQLRDN 454

Query: 925  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDV 746
            S WMFA+ GR+ AA IREWMGDFS IKNVAKYAARLGQS GSSKESLSVA +EV KIPDV
Sbjct: 455  SVWMFASNGRLKAADIREWMGDFSSIKNVAKYAARLGQSLGSSKESLSVAHHEVLKIPDV 514

Query: 745  EIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKL 566
             ++RNG KY+FSDGIGKISA FA+RVS KCGY FIPSAFQIRY GYKGVVAVDPTS +KL
Sbjct: 515  GVIRNGVKYIFSDGIGKISAEFAKRVSIKCGYDFIPSAFQIRYGGYKGVVAVDPTSSIKL 574

Query: 565  SLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDA 386
            SLR SM KF+S NTKLDILAISKYQPCYMNRQLITLLSTLGV+D+VFE+KQKE VDLLDA
Sbjct: 575  SLRNSMCKFESQNTKLDILAISKYQPCYMNRQLITLLSTLGVKDHVFEKKQKEVVDLLDA 634

Query: 385  ILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTR 206
            +L+EP+KAQEALELMSP ENTNIMKEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTR
Sbjct: 635  VLREPMKAQEALELMSPSENTNIMKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTR 694

Query: 205  IFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHS-GMMSNELKTVRGKVVVAK 29
            I+VPKGR+MMGCLDETRTLEYGEVFVQ+S AG+R +  D+      N+ + V GKVVVAK
Sbjct: 695  IYVPKGRTMMGCLDETRTLEYGEVFVQFSEAGRRTMHHDNDVNGGGNKCRVVVGKVVVAK 754

Query: 28   NPCLHPGDV 2
            NPCLHPGDV
Sbjct: 755  NPCLHPGDV 763


>ref|XP_021977395.1| probable RNA-dependent RNA polymerase 1 [Helianthus annuus]
          Length = 1118

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 505/724 (69%), Positives = 596/724 (82%), Gaps = 19/724 (2%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRL-WYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            RAYARVQF T + V+YI+ + ++R+L WY  SY    + D DLV+KPR YA +++  TLH
Sbjct: 45   RAYARVQFRTDDHVEYILPMVNNRKLLWYDKSYFMARKMDFDLVKKPRQYACEMECTTLH 104

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVS + LSVL  M+NASVKFG   RKLYFGV     SYKLQL+YENIWQVQ H PRG
Sbjct: 105  FGCQVSTESLSVLCKMKNASVKFGSELRKLYFGVPWSTTSYKLQLAYENIWQVQLHCPRG 164

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            + +RFLVIQL+GAPRI++KVE+N +++YRE  DDQWVRATDFT S +IGQSSHLC+E+  
Sbjct: 165  VAARFLVIQLYGAPRIYQKVEDNPYNYYREHSDDQWVRATDFTPSFAIGQSSHLCIEIPH 224

Query: 1579 DVDLNLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            +V+L     FP Y+ES+ PFNL  G+SFS+  D  LVP+VGP +G  LP+NIVFKICALV
Sbjct: 225  NVELPDLSSFPNYKESNHPFNLVTGYSFSKNMD--LVPMVGPTQGYNLPFNIVFKICALV 282

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            QHGCIPGPVLD  F+ LLDPQ+    + SIEYV++KLY LKDCCY+PV++IT+EY+ N +
Sbjct: 283  QHGCIPGPVLDDDFFALLDPQKHA--IESIEYVMKKLYLLKDCCYDPVRFITQEYQNNKK 340

Query: 1219 LRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEE 1040
            LR+PAISLDP  GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVSFVDEE
Sbjct: 341  LRSPAISLDP--GLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVSFVDEE 398

Query: 1039 LEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAWM 914
            LE +Y+T+LS + +  N E +TGIY RIL ILK+G                     SAWM
Sbjct: 399  LENVYATELSSK-VCVNGEKRTGIYRRILSILKNGIVIGDKKFEFLASSSSQLRDNSAWM 457

Query: 913  FAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIVR 734
            FA+TG +NAA IR WMGDFS I+NVAKYAARLGQSFGSSKES  VA+YEVE+IPD+E+VR
Sbjct: 458  FASTGSLNAAEIRNWMGDFSSIRNVAKYAARLGQSFGSSKESFCVARYEVEEIPDIEVVR 517

Query: 733  NGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 554
            NGTKYVFSDGIGKIS+  A+RVS+KCGY F+PSAFQIRYAGYKGVVAVDPTS +KLSLRK
Sbjct: 518  NGTKYVFSDGIGKISSELAERVSRKCGYNFVPSAFQIRYAGYKGVVAVDPTSFVKLSLRK 577

Query: 553  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 374
            SM KF+SDNTKLDIL ISKYQ CY+NRQ+ITLLSTLGV D+VFE+KQ++AV LLDAIL +
Sbjct: 578  SMCKFESDNTKLDILLISKYQACYLNRQIITLLSTLGVSDHVFEKKQRDAVCLLDAILAD 637

Query: 373  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 194
            P+KA+EAL+LMSPGENTN++KEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTRIFVP
Sbjct: 638  PMKAEEALDLMSPGENTNVIKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTRIFVP 697

Query: 193  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCLH 14
            KGR M+GCLDETRTLEYG+VFVQYS A + PL D++SG+ S + + V G VVVAKNPCLH
Sbjct: 698  KGRVMIGCLDETRTLEYGQVFVQYSSARRTPLGDEYSGLGSYKARIVSGDVVVAKNPCLH 757

Query: 13   PGDV 2
            PGDV
Sbjct: 758  PGDV 761


>gb|OTG18486.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1173

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 505/724 (69%), Positives = 596/724 (82%), Gaps = 19/724 (2%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRL-WYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            RAYARVQF T + V+YI+ + ++R+L WY  SY    + D DLV+KPR YA +++  TLH
Sbjct: 100  RAYARVQFRTDDHVEYILPMVNNRKLLWYDKSYFMARKMDFDLVKKPRQYACEMECTTLH 159

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQVS + LSVL  M+NASVKFG   RKLYFGV     SYKLQL+YENIWQVQ H PRG
Sbjct: 160  FGCQVSTESLSVLCKMKNASVKFGSELRKLYFGVPWSTTSYKLQLAYENIWQVQLHCPRG 219

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
            + +RFLVIQL+GAPRI++KVE+N +++YRE  DDQWVRATDFT S +IGQSSHLC+E+  
Sbjct: 220  VAARFLVIQLYGAPRIYQKVEDNPYNYYREHSDDQWVRATDFTPSFAIGQSSHLCIEIPH 279

Query: 1579 DVDLNLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            +V+L     FP Y+ES+ PFNL  G+SFS+  D  LVP+VGP +G  LP+NIVFKICALV
Sbjct: 280  NVELPDLSSFPNYKESNHPFNLVTGYSFSKNMD--LVPMVGPTQGYNLPFNIVFKICALV 337

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            QHGCIPGPVLD  F+ LLDPQ+    + SIEYV++KLY LKDCCY+PV++IT+EY+ N +
Sbjct: 338  QHGCIPGPVLDDDFFALLDPQKHA--IESIEYVMKKLYLLKDCCYDPVRFITQEYQNNKK 395

Query: 1219 LRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEE 1040
            LR+PAISLDP  GLVYVRRVQITPSKVYF GPE+NVSNRVLRHY+DYIDNFLRVSFVDEE
Sbjct: 396  LRSPAISLDP--GLVYVRRVQITPSKVYFWGPEVNVSNRVLRHYADYIDNFLRVSFVDEE 453

Query: 1039 LEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------SAWM 914
            LE +Y+T+LS + +  N E +TGIY RIL ILK+G                     SAWM
Sbjct: 454  LENVYATELSSK-VCVNGEKRTGIYRRILSILKNGIVIGDKKFEFLASSSSQLRDNSAWM 512

Query: 913  FAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVEIVR 734
            FA+TG +NAA IR WMGDFS I+NVAKYAARLGQSFGSSKES  VA+YEVE+IPD+E+VR
Sbjct: 513  FASTGSLNAAEIRNWMGDFSSIRNVAKYAARLGQSFGSSKESFCVARYEVEEIPDIEVVR 572

Query: 733  NGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRK 554
            NGTKYVFSDGIGKIS+  A+RVS+KCGY F+PSAFQIRYAGYKGVVAVDPTS +KLSLRK
Sbjct: 573  NGTKYVFSDGIGKISSELAERVSRKCGYNFVPSAFQIRYAGYKGVVAVDPTSFVKLSLRK 632

Query: 553  SMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAILKE 374
            SM KF+SDNTKLDIL ISKYQ CY+NRQ+ITLLSTLGV D+VFE+KQ++AV LLDAIL +
Sbjct: 633  SMCKFESDNTKLDILLISKYQACYLNRQIITLLSTLGVSDHVFEKKQRDAVCLLDAILAD 692

Query: 373  PLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVP 194
            P+KA+EAL+LMSPGENTN++KEMLSCGYKPNAEPFLSMMLQVFRA KLLE+RTKTRIFVP
Sbjct: 693  PMKAEEALDLMSPGENTNVIKEMLSCGYKPNAEPFLSMMLQVFRATKLLELRTKTRIFVP 752

Query: 193  KGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTVRGKVVVAKNPCLH 14
            KGR M+GCLDETRTLEYG+VFVQYS A + PL D++SG+ S + + V G VVVAKNPCLH
Sbjct: 753  KGRVMIGCLDETRTLEYGQVFVQYSSARRTPLGDEYSGLGSYKARIVSGDVVVAKNPCLH 812

Query: 13   PGDV 2
            PGDV
Sbjct: 813  PGDV 816


>gb|OTG18548.1| putative RNA-dependent RNA polymerase, eukaryotic-type [Helianthus
            annuus]
          Length = 1030

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 505/685 (73%), Positives = 579/685 (84%), Gaps = 19/685 (2%)
 Frame = -1

Query: 1999 MDLVQKPRHYALDVDGVTLHFGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGAS 1820
            MDLVQKPR +A +++GVTLHFGCQVSK+ L VL  M  ASVKFGFG RK+YFGV     S
Sbjct: 1    MDLVQKPRQFAYEMEGVTLHFGCQVSKEKLPVLCKMERASVKFGFGLRKIYFGVPWLDTS 60

Query: 1819 YKLQLSYENIWQVQFHRPRGLTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRAT 1640
            YKLQLSYENIWQVQ H PRG  + +LVIQL+GAPR+++KVE+N  +FY+E PDDQWVR+T
Sbjct: 61   YKLQLSYENIWQVQLHCPRGAPASYLVIQLYGAPRLYQKVEDNPHNFYKELPDDQWVRST 120

Query: 1639 DFTSSASIGQSSHLCLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPI 1463
            DFT S +IGQSSHLC+E+  DV+  +L  YFPY+EES+ PFNL  G SFSQ SD  LVPI
Sbjct: 121  DFTPSYAIGQSSHLCIEIPHDVEPPDLDRYFPYFEESYHPFNLVPGRSFSQSSD--LVPI 178

Query: 1462 VGPARGVCLPYNIVFKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYY 1283
            VGP     LP+ +VFKICALVQHGCIPGPVLD+ FY LLDPQRR  D+ +IEYV+EKLY+
Sbjct: 179  VGPLPWCYLPFKVVFKICALVQHGCIPGPVLDANFYALLDPQRR--DIEAIEYVMEKLYF 236

Query: 1282 LKDCCYEPVKWITEEYRKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNR 1103
             KDCCY+PV+ ITEEY KN +L++PAISLD   GLVYVRRVQITPSKVYFCGPE+NVSNR
Sbjct: 237  SKDCCYDPVRLITEEYLKNKKLKSPAISLD--TGLVYVRRVQITPSKVYFCGPEVNVSNR 294

Query: 1102 VLRHYSDYIDNFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX- 926
            VLRHY++YIDNFLRVSF+DEELEKLYSTDL+P+ + +N ES+T IY RIL IL++G    
Sbjct: 295  VLRHYAEYIDNFLRVSFLDEELEKLYSTDLAPK-VGRNGESRTAIYRRILSILRNGISIG 353

Query: 925  -----------------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSS 797
                             SAWMFA+TGR+NAA+IR WMGDFS IKNVAKYAARLGQSFGSS
Sbjct: 354  GKKFEFLAFSSSQLRDNSAWMFASTGRLNAAAIRNWMGDFSSIKNVAKYAARLGQSFGSS 413

Query: 796  KESLSVAQYEVEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRY 617
            KESLSVAQ+EVE+IPDVEIVR+GT+YVFSDGIGKISA FA+RVS KCGY  IPSAFQ+RY
Sbjct: 414  KESLSVAQHEVEEIPDVEIVRSGTRYVFSDGIGKISAEFAKRVSSKCGYDIIPSAFQVRY 473

Query: 616  AGYKGVVAVDPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVR 437
             GYKGVVAVDPTS MKLSLRKSM KF+S NTKLDILA+SKYQPCYMNRQLITLLSTLG+ 
Sbjct: 474  GGYKGVVAVDPTSYMKLSLRKSMCKFESTNTKLDILAVSKYQPCYMNRQLITLLSTLGIP 533

Query: 436  DYVFERKQKEAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMM 257
            D++FE+KQ+EAV LLDAIL EP+KA+EAL+LMSPGENTN+MK MLSCGYKPNAEPFLSMM
Sbjct: 534  DHIFEKKQREAVCLLDAILVEPIKAEEALDLMSPGENTNVMKGMLSCGYKPNAEPFLSMM 593

Query: 256  LQVFRAAKLLEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM 77
            LQVFRA KLLE+RTKTR+FVP GRSMMGCLDETRTLEYGEVFV YS AG+RPL D++SG+
Sbjct: 594  LQVFRATKLLELRTKTRVFVPNGRSMMGCLDETRTLEYGEVFVHYSSAGRRPLGDEYSGI 653

Query: 76   MSNELKTVRGKVVVAKNPCLHPGDV 2
             S + + VRG VVVAKNPCLHPGDV
Sbjct: 654  GSCKSRIVRGNVVVAKNPCLHPGDV 678


>gb|PLY72463.1| hypothetical protein LSAT_2X70281 [Lactuca sativa]
          Length = 991

 Score =  907 bits (2344), Expect = 0.0
 Identities = 462/639 (72%), Positives = 529/639 (82%), Gaps = 21/639 (3%)
 Frame = -1

Query: 1855 KLYFGVTEYGASYKLQLSYENIWQVQFHRPRGLTSRFLVIQLFGAPRIFKKVENNVFSFY 1676
            +LYF ++     YKLQLSYENI QVQ HR  G T++F+VIQL+GAPRIF+KVE ++ ++Y
Sbjct: 57   RLYFVISYSTTCYKLQLSYENICQVQLHRSHGNTTKFVVIQLYGAPRIFQKVEEDIHNYY 116

Query: 1675 REEPDDQWVRATDFTSSASIGQSSHLCLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHS 1499
             + PDDQW+RATDFT  +SIGQSSHLCLEL   V+L NL  YFPYYEE++  F L  GHS
Sbjct: 117  SDIPDDQWIRATDFTPYSSIGQSSHLCLELPYGVELPNLSRYFPYYEENNRQFKLMKGHS 176

Query: 1498 FSQRSDAKLVPIVGPARGVCLPYNIVFKICALVQHGCIPGPVLDSKFYELLDPQRRERDL 1319
            FS+  D  LVPIVGP     LPYNIVFKICALVQHGCIPGP+LDS F+ELLDPQRR   +
Sbjct: 177  FSKNLD--LVPIVGPT--FYLPYNIVFKICALVQHGCIPGPLLDSSFFELLDPQRRH--I 230

Query: 1318 ASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSRLRA-PAISLDPDAGLVYVRRVQITPSK 1142
             SIEYVLEKLYY+KDCCY+P++WI +EY+ N+R+R+ PAISLD D  LVYVRR+QITPSK
Sbjct: 231  GSIEYVLEKLYYVKDCCYDPIRWIKDEYKNNNRIRSSPAISLDSD--LVYVRRIQITPSK 288

Query: 1141 VYFCGPEINVSNRVLRHYSDYIDNFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYT 962
            VYFCGPE+NVSNRVLRH++ YIDNF+RVSF+DEELEKLYSTDLSPRA +   +++TGIY 
Sbjct: 289  VYFCGPEVNVSNRVLRHFAQYIDNFIRVSFLDEELEKLYSTDLSPRANNIFGKTRTGIYK 348

Query: 961  RILLILKDGXXX------------------SAWMFAATGRVNAASIREWMGDFSRIKNVA 836
            RIL +LK+G                     S WMFA+ GR+ AA IREWMGDFS IKNVA
Sbjct: 349  RILSVLKNGIVIGNKKFEFLAFSSSQLRDNSVWMFASNGRLKAADIREWMGDFSSIKNVA 408

Query: 835  KYAARLGQSFGSSKESLSVAQYEVEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKC 656
            KYAARLGQS GSSKESLSVA +EV KIPDV ++RNG KY+FSDGIGKISA FA+RVS KC
Sbjct: 409  KYAARLGQSLGSSKESLSVAHHEVLKIPDVGVIRNGVKYIFSDGIGKISAEFAKRVSIKC 468

Query: 655  GYGFIPSAFQIRYAGYKGVVAVDPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMN 476
            GY FIPSAFQIRY GYKGVVAVDPTS +KLSLR SM KF+S NTKLDILAISKYQPCYMN
Sbjct: 469  GYDFIPSAFQIRYGGYKGVVAVDPTSSIKLSLRNSMCKFESQNTKLDILAISKYQPCYMN 528

Query: 475  RQLITLLSTLGVRDYVFERKQKEAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSC 296
            RQLITLLSTLGV+D+VFE+KQKE VDLLDA+L+EP+KAQEALELMSP ENTNIMKEMLSC
Sbjct: 529  RQLITLLSTLGVKDHVFEKKQKEVVDLLDAVLREPMKAQEALELMSPSENTNIMKEMLSC 588

Query: 295  GYKPNAEPFLSMMLQVFRAAKLLEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSG 116
            GYKPNAEPFLSMMLQVFRA KLLE+RTKTRI+VPKGR+MMGCLDETRTLEYGEVFVQ+S 
Sbjct: 589  GYKPNAEPFLSMMLQVFRATKLLELRTKTRIYVPKGRTMMGCLDETRTLEYGEVFVQFSE 648

Query: 115  AGKRPLSDDHS-GMMSNELKTVRGKVVVAKNPCLHPGDV 2
            AG+R +  D+      N+ + V GKVVVAKNPCLHPGDV
Sbjct: 649  AGRRTMHHDNDVNGGGNKCRVVVGKVVVAKNPCLHPGDV 687


>gb|KVG42498.1| RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus
            var. scolymus]
          Length = 994

 Score =  897 bits (2318), Expect = 0.0
 Identities = 459/630 (72%), Positives = 520/630 (82%), Gaps = 29/630 (4%)
 Frame = -1

Query: 1804 SYENIWQVQ---FHRPR-------GLTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQ 1655
            SY   W++      +PR       G+T  F   QL+GAPRI +KVE+N+F++YRE PDDQ
Sbjct: 41   SYLKAWELDTDIVQKPRHFALDMDGITLHF-GCQLYGAPRISQKVEDNIFNYYREIPDDQ 99

Query: 1654 WVRATDFTSSASIGQSSHLCLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDA 1478
            WVRATDF+ S SIGQSSHLCLELS  V++ NL  YFPYYEES+ PFNL  GHSFSQ  D 
Sbjct: 100  WVRATDFSPSFSIGQSSHLCLELSHGVEIPNLGRYFPYYEESNRPFNLVTGHSFSQNLD- 158

Query: 1477 KLVPIVGPARGVCLPYNIVFKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVL 1298
             LVPIVGPARG  LPY I+FK+C+LVQHGCIPGPVLD+ F+ELLDP RR  D+ASI+YVL
Sbjct: 159  -LVPIVGPARGSNLPYKIIFKVCSLVQHGCIPGPVLDANFFELLDPARR--DIASIDYVL 215

Query: 1297 EKLYYLKDCCYEPVKWITEEYRKNSRLRAPAISLDPDAGLVYVRRVQITPSKVYFCGPEI 1118
            +KL Y KDC Y+PV+WIT+EYR+N+RLR P ISLD  AGLVYVRRVQITPSKVYFCGPE+
Sbjct: 216  DKLLYQKDCIYDPVRWITQEYRRNNRLRTPTISLD--AGLVYVRRVQITPSKVYFCGPEV 273

Query: 1117 NVSNRVLRHYSDYIDNFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKD 938
            NVSNRVLR+++ YID+FLRVSF+DEELEKLYSTDL+PRA +++ ES+TGIY RIL IL+D
Sbjct: 274  NVSNRVLRNFATYIDDFLRVSFLDEELEKLYSTDLAPRATNRSEESRTGIYKRILSILRD 333

Query: 937  GXXX------------------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQ 812
            G                     SAWMFA++  + AA IREWMG F+ IKNVAKYAARLGQ
Sbjct: 334  GIVIGRKKFEFLAFSSSQLRDNSAWMFASSNXLTAADIREWMGKFNSIKNVAKYAARLGQ 393

Query: 811  SFGSSKESLSVAQYEVEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSA 632
            SFGSSKESL VA YEVEKIPD+E+VR GTKYVFSDGIGKIS  FA  VS KCGY FIPSA
Sbjct: 394  SFGSSKESLXVAPYEVEKIPDIEVVRGGTKYVFSDGIGKISXEFASXVSJKCGYDFIPSA 453

Query: 631  FQIRYAGYKGVVAVDPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLS 452
            FQIRY GYKGVVA+DPTS  KLSLR SM KFDSDNTKLD+LAISKYQPCYMNRQ+ITLLS
Sbjct: 454  FQIRYGGYKGVVAIDPTSSKKLSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLS 513

Query: 451  TLGVRDYVFERKQKEAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEP 272
            TLGVRD+VFE+KQKEAVDLLDAIL+EP+KA+EALELMSPGENTNI+KEML+CGYKPNAEP
Sbjct: 514  TLGVRDHVFEKKQKEAVDLLDAILREPMKAEEALELMSPGENTNILKEMLACGYKPNAEP 573

Query: 271  FLSMMLQVFRAAKLLEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSD 92
            FLSMMLQVFRA KLLE+RTKTR FVP+GR MMGCLDETRTLEYGEVFVQ+SG+ +R L D
Sbjct: 574  FLSMMLQVFRATKLLELRTKTRXFVPRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGD 633

Query: 91   DHSGMMSNELKTVRGKVVVAKNPCLHPGDV 2
            D SG  SN  + V GKVVVAKNPCLHPGDV
Sbjct: 634  DFSGGSSNSCRIVTGKVVVAKNPCLHPGDV 663



 Score = 86.3 bits (212), Expect = 1e-13
 Identities = 35/47 (74%), Positives = 42/47 (89%)
 Frame = -1

Query: 2065 IDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHFGCQV 1925
            +DLAS +RLWYG SYLK WE D D+VQKPRH+ALD+DG+TLHFGCQ+
Sbjct: 28   LDLASRKRLWYGPSYLKAWELDTDIVQKPRHFALDMDGITLHFGCQL 74


>gb|PIM98069.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1113

 Score =  877 bits (2266), Expect = 0.0
 Identities = 453/730 (62%), Positives = 549/730 (75%), Gaps = 25/730 (3%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHF 1937
            R+YARVQF      D +IDLA+ RRL+YGTSYLK WE D D+VQ PR Y  +++ VTL+ 
Sbjct: 45   RSYARVQFANSRCADVVIDLAN-RRLYYGTSYLKAWESDTDIVQNPRAYVHEMEQVTLNL 103

Query: 1936 GCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGL 1757
            GCQ S++  SVL    + SVKFG G +K++F +      Y+LQLSYE+IWQ+  + PRGL
Sbjct: 104  GCQTSEEKFSVLWKATSVSVKFGLGMKKMHFFLCHNSVQYRLQLSYESIWQIVMYNPRGL 163

Query: 1756 TSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSRD 1577
            +++FLVIQLFGAPRI+KK+E+++ SF+RE PDDQWVR TDFT S  IGQSS LCL+L   
Sbjct: 164  SAKFLVIQLFGAPRIYKKLEDSIHSFFRETPDDQWVRTTDFTPSC-IGQSSGLCLQLPYG 222

Query: 1576 VDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            + L N RD F YY+E  +PF L     +S  S   LVPIV P RG  LPY I+FK+C+LV
Sbjct: 223  MRLPNFRDNFVYYKERETPFRLETAAPYSHNST--LVPIVHPPRGHELPYKIIFKVCSLV 280

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            Q GC+ GP LD+ F+ L++PQR   ++  IE+ LEKLYYLKDCCY+PV W+ E+Y+K   
Sbjct: 281  QSGCLSGPNLDANFFRLVNPQRY--NIRYIEHALEKLYYLKDCCYDPVPWLIEQYQKYRT 338

Query: 1219 LR----APAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1052
            L+    +PAISLD   GLVYV RVQ+TP +VYF GPE+NVSNRV R Y DYID+FLRVSF
Sbjct: 339  LKEQPKSPAISLDD--GLVYVHRVQVTPCRVYFSGPEVNVSNRVTRQYHDYIDHFLRVSF 396

Query: 1051 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------ 926
            VDEE EK+YSTDLSPRA + +   +T +Y RIL  L+ G                     
Sbjct: 397  VDEEWEKMYSTDLSPRAAAGDETRRTKLYERILSTLRQGIRIGNRKFDFLAFSSSQLRDN 456

Query: 925  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDV 746
            S WMFA T  +NA  IR WMGDF  I+NVAKYAARLGQSFGSS E+LSV  +EVE+IPDV
Sbjct: 457  SLWMFAPTHNLNADDIRRWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGSHEVERIPDV 516

Query: 745  EIVRNGTKYVFSDGIGKISAAFAQRVSKKCGYG-FIPSAFQIRYAGYKGVVAVDPTSDMK 569
            E VRNGT+YVFSDGIGKISA FA+RV+ KCG    +PSAFQIRY GYKGVVAVDP+S MK
Sbjct: 517  EAVRNGTRYVFSDGIGKISAEFARRVAVKCGCKRSVPSAFQIRYGGYKGVVAVDPSSSMK 576

Query: 568  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 389
            LSLR SMSK+ SDNTKLD+LA SKYQPC++NRQ+ITLLSTLGV D++FE+KQ+EAV  LD
Sbjct: 577  LSLRPSMSKYQSDNTKLDVLAWSKYQPCFLNRQIITLLSTLGVMDHIFEKKQREAVAQLD 636

Query: 388  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 209
             IL +P+KAQEAL+LMSPGENTNI+KEM++CGYKPN EPFLSMMLQ FRA+KLL++R K 
Sbjct: 637  DILVDPVKAQEALDLMSPGENTNILKEMMNCGYKPNEEPFLSMMLQTFRASKLLDLRVKA 696

Query: 208  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELK-TVRGKVVVA 32
            RIFVP+ R MMGCLDET TLEYG+VFVQ+SGAG+R   +D  G  S +    V+GKV VA
Sbjct: 697  RIFVPQARQMMGCLDETGTLEYGQVFVQFSGAGRRRFYEDSYGYGSADYNYIVKGKVTVA 756

Query: 31   KNPCLHPGDV 2
             NPCLHPGDV
Sbjct: 757  NNPCLHPGDV 766


>ref|XP_011075687.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
 ref|XP_011075688.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
 ref|XP_020548818.1| probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
          Length = 1115

 Score =  867 bits (2239), Expect = 0.0
 Identities = 444/732 (60%), Positives = 548/732 (74%), Gaps = 27/732 (3%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHF 1937
            RAYA+VQFT     + I +LAS  RL+YGTSYL+VWE D D+V  PR Y  +++ VTL+F
Sbjct: 45   RAYAKVQFTHSRYAEMIQNLAS-TRLYYGTSYLRVWESDSDIVHNPRTYVHEMEQVTLNF 103

Query: 1936 GCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGL 1757
            GCQ S++  SVL  + + SVKFG G +K++F +      YKLQLSYENIWQ+  + P G 
Sbjct: 104  GCQTSREKFSVLWKVASVSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQIVLYHPHGQ 163

Query: 1756 TSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSRD 1577
            T++ L+IQLFGAPRI+KKV  +++S++ E  DDQW+R TDFT S  IGQ+S LCLEL   
Sbjct: 164  TAKLLLIQLFGAPRIYKKVSESIYSYFSETQDDQWIRTTDFTPSC-IGQASGLCLELPYG 222

Query: 1576 VDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            + L N +D+F YY +S +PF+L  G  FS   D  LVPI+ P RG  LPY I+FK+C+LV
Sbjct: 223  MRLPNFQDHFVYYSKSENPFHLERGAPFSHNLD--LVPILHPPRGFELPYRILFKVCSLV 280

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            Q GC+PGP LD++F++L++PQR       +E+ LEKLYYLK+CCY+P  W+ E+Y K   
Sbjct: 281  QTGCLPGPKLDARFFQLVNPQRINTKY--VEHALEKLYYLKECCYDPTTWLMEQYEKYRT 338

Query: 1219 LR----APAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1052
             +    +P ISL    GLVYV RVQ+TP+KVYF GPE+NVSNRVLRHYSDYIDNFLRVSF
Sbjct: 339  AKEQPTSPVISLGD--GLVYVHRVQVTPTKVYFSGPEVNVSNRVLRHYSDYIDNFLRVSF 396

Query: 1051 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------ 926
            VDEE +K+YSTDLSPR  S +   KT +Y RIL  L++G                     
Sbjct: 397  VDEEWDKMYSTDLSPRVASADENGKTKLYERILKTLREGIRIGNKNFEFLAFSSSQLRDN 456

Query: 925  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDV 746
            S WMFA T  +NA  IR+WMGDF  I+NVAKYAARLGQSFGSS E+LSV Q+E+E+IPD+
Sbjct: 457  SLWMFAPTNNLNAHYIRQWMGDFRSIRNVAKYAARLGQSFGSSTETLSVGQHEIERIPDI 516

Query: 745  EIVRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVDPTSDMK 569
            E VR GTKY+FSDGIGKISA FA+RV+ +CG     PSAFQIRY GYKGVVAVDPTS +K
Sbjct: 517  EAVRGGTKYIFSDGIGKISAEFARRVAVRCGVKNSTPSAFQIRYGGYKGVVAVDPTSSVK 576

Query: 568  LSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLD 389
            LSLR SM K+ S+NTKLD+LA SKYQPC++NRQ+ITLLSTLGV+D+ FERKQ+EAV  LD
Sbjct: 577  LSLRSSMLKYQSENTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHAFERKQREAVAQLD 636

Query: 388  AILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKT 209
             IL +PL+AQEAL+LM+PGENTNI+KEML CGYKP+ EPFLSMMLQ FRA+KLL++R K 
Sbjct: 637  DILVDPLRAQEALDLMAPGENTNILKEMLKCGYKPDGEPFLSMMLQTFRASKLLDLRLKA 696

Query: 208  RIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDD---HSGMMSNELKTVRGKVV 38
            RIFVP+GR MMGCLDET TLEYGEVFVQ+SGA +R  +++    +  MS     V+GKVV
Sbjct: 697  RIFVPQGRQMMGCLDETGTLEYGEVFVQFSGALRRQFNEESIMFNDYMSEYNYIVKGKVV 756

Query: 37   VAKNPCLHPGDV 2
            VAKNPCLHPGDV
Sbjct: 757  VAKNPCLHPGDV 768


>ref|XP_015895367.1| PREDICTED: RNA-dependent RNA polymerase 1 [Ziziphus jujuba]
          Length = 1126

 Score =  858 bits (2218), Expect = 0.0
 Identities = 446/737 (60%), Positives = 544/737 (73%), Gaps = 32/737 (4%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHF 1937
            R YA VQFT+    ++II LA   RLWYGTSYL     D D+V KPR Y   ++ +TLHF
Sbjct: 45   RYYAIVQFTSTRDAEFIISLAG-ARLWYGTSYLTARSMDTDIVAKPRTYLHSLENITLHF 103

Query: 1936 GCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGL 1757
            GCQ+SK+  SVL    N SV FG G R+L+F        YKLQLSYENIWQ++ HRP G 
Sbjct: 104  GCQISKEKFSVLWKRENVSVDFGIGLRRLHFHFMYQYVEYKLQLSYENIWQIELHRPLGQ 163

Query: 1756 TSRFLVIQLFGAPRIFKK--------VENNVFSFYREEPDDQWVRATDFTSSASIGQSSH 1601
            T ++L+IQL+GAPRI++K         E+ +F+F+++ PDDQWVRATDFT S  IGQSS 
Sbjct: 164  TVKYLLIQLYGAPRIYEKDVPSSGDVYEDPIFNFFKDTPDDQWVRATDFTPSCRIGQSSA 223

Query: 1600 LCLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNI 1424
            LCLEL     L N ++ F YY+ES   F+L  G  FS   +  LVPIVGP   V LPY+I
Sbjct: 224  LCLELPSGPRLPNFKENFAYYKESEGRFSLETGFPFS--CNLYLVPIVGPPLDVHLPYDI 281

Query: 1423 VFKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWIT 1244
            +FKI AL+Q GC+ GP LD+ FY L+DP+R   ++A IE+ L+KLY LK+CCYEP  W+ 
Sbjct: 282  IFKINALLQQGCLTGPSLDAAFYRLVDPRRI--NVACIEHALDKLYNLKECCYEPSTWLN 339

Query: 1243 EEYRKNSRLRAPAIS--LDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDN 1070
            E+YRK  + + P  S  +  DAGLVYVRRVQITP KVYF GPEINVSNRVLRHY ++IDN
Sbjct: 340  EQYRKYFKSKRPPKSPMISLDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDN 399

Query: 1069 FLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------ 926
            FLRVSFVDEEL+K+YSTDLSPR    N+ +KTG+Y R+L +L+DG               
Sbjct: 400  FLRVSFVDEELDKMYSTDLSPR----NSATKTGLYKRVLSVLRDGIIIGNKKFEFLAFSS 455

Query: 925  ------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEV 764
                  S WMFA +  + AA IREWMGDF +I+NVAKYAARLGQSFGSS E+LSV+++EV
Sbjct: 456  SQLRDNSTWMFAPSDGITAADIREWMGDFRQIRNVAKYAARLGQSFGSSTETLSVSRHEV 515

Query: 763  EKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAVD 587
            EKIPD+E+V  G KY FSDGIGKIS+ FA++V+ KCG  G  PSAFQIRY GYKGVVAVD
Sbjct: 516  EKIPDIEVVYGGVKYAFSDGIGKISSEFARKVASKCGCNGVTPSAFQIRYGGYKGVVAVD 575

Query: 586  PTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKE 407
            PTS  KLSLRKSM K++SDN KLD+LA SK+QPC++NRQLI+LLSTLGV D VF +KQ +
Sbjct: 576  PTSSFKLSLRKSMCKYESDNIKLDVLAYSKFQPCFLNRQLISLLSTLGVEDQVFLKKQSK 635

Query: 406  AVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLL 227
            AV  LDAIL +PL+AQEAL+LMSPGENTN++KE+L CGYKP+ EP+LSMMLQ FRA+KLL
Sbjct: 636  AVQQLDAILTDPLRAQEALDLMSPGENTNVLKELLMCGYKPDTEPYLSMMLQTFRASKLL 695

Query: 226  EIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDH--SGMMSNELKTV 53
            E+RTK+RIF+P GR+MMGCLDETRTLEYG+VFVQ+SG+  R   D     G  + +   V
Sbjct: 696  ELRTKSRIFIPDGRAMMGCLDETRTLEYGQVFVQFSGSRYRQFGDSPMLGGNGTKQRFIV 755

Query: 52   RGKVVVAKNPCLHPGDV 2
             G VVVAKNPCLHPGDV
Sbjct: 756  TGSVVVAKNPCLHPGDV 772


>emb|CDP05596.1| unnamed protein product [Coffea canephora]
          Length = 1112

 Score =  857 bits (2214), Expect = 0.0
 Identities = 445/733 (60%), Positives = 554/733 (75%), Gaps = 28/733 (3%)
 Frame = -1

Query: 2116 RAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHF 1937
            RAYA+VQFT     +YI+ LA  +RL YG+SYL+ WE D+DLV + R +  +++ + LHF
Sbjct: 45   RAYAKVQFTNDRSAEYIMTLAK-KRLNYGSSYLRAWEMDVDLVPRARSFEHNMEQIVLHF 103

Query: 1936 GCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGL 1757
            GCQVSK   SVL  + N SV+FG G RK+YF +      YKL+LSYENIWQ+  HR R L
Sbjct: 104  GCQVSKNRFSVLRNVPNVSVRFGIGMRKMYFILRFRSCDYKLELSYENIWQIVLHR-RSL 162

Query: 1756 TSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSRD 1577
              +FL+IQLFGAPR+FKK+E + FS+++E PDDQWVR TDFTSS  IGQSS +CLEL R 
Sbjct: 163  APKFLLIQLFGAPRVFKKLEESTFSYFKETPDDQWVRTTDFTSSC-IGQSSGICLELPRG 221

Query: 1576 VDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICALV 1400
            + L NL DYF +++ES S F L  G  +S   +  L PI+ P +G+ LPY I+FK+C LV
Sbjct: 222  IQLPNLGDYFAWFKESDSQFFLETGSPYSY--NLVLAPILQPPQGLYLPYGILFKVCCLV 279

Query: 1399 QHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNSR 1220
            Q GC+PGP LD+ F+ L+DPQR +  +  IE+ LE LY LK+CCYEPV+W+ E+Y K  +
Sbjct: 280  QTGCLPGPSLDANFFRLVDPQRIK--IRYIEHALENLYMLKECCYEPVQWLKEQYDKYDK 337

Query: 1219 LR----APAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSF 1052
            LR    +P ++LD   GLVYVRRVQ+TP KVYFCGPE+NVSNRVLR++S+ +DNFLRVSF
Sbjct: 338  LRQLPKSPTLTLDD--GLVYVRRVQVTPCKVYFCGPEVNVSNRVLRNFSEDLDNFLRVSF 395

Query: 1051 VDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------ 926
            +DEE  K++STDLSPR I+ N   +T IY RIL  LK+G                     
Sbjct: 396  IDEEWNKMFSTDLSPR-IAANENGRTEIYERILSTLKNGMVIGDKKFEFLAFSSSQLRDN 454

Query: 925  SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDV 746
            S WMFA+   + AA IR WMGDFSRI+NVAKYAARLGQSF SS E+L+V ++E+E I D+
Sbjct: 455  SVWMFASRPGLTAADIRTWMGDFSRIRNVAKYAARLGQSFSSSTETLNVGRHEIEMISDI 514

Query: 745  EIVRNG----TKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTS 578
            E VR G    +KYVFSDGIGK+SA FA++V+ KCG  F PSAFQIRY G+KGVVAVDPTS
Sbjct: 515  E-VRGGYFGTSKYVFSDGIGKMSAQFARQVATKCGLSFTPSAFQIRYGGFKGVVAVDPTS 573

Query: 577  DMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVD 398
              KLSLR+SM K++SDNTKLD+LA SKYQPC++NRQLITLLSTLGV+D VFE+KQ+EAV 
Sbjct: 574  SKKLSLRQSMMKYESDNTKLDVLAWSKYQPCFLNRQLITLLSTLGVKDVVFEKKQREAVA 633

Query: 397  LLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIR 218
             LD IL +PL+A+EALELM+PGENTN++KEML CGYKP++EPFLSMMLQ FRA+KLL++R
Sbjct: 634  QLDTILTDPLRAREALELMAPGENTNVLKEMLKCGYKPDSEPFLSMMLQTFRASKLLDLR 693

Query: 217  TKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGMMSNELKTV-RGKV 41
            TKTRIF+P GRSM+GCLDETRTLEYG+VFVQ+S AG R   DD   +   E KT+ +G V
Sbjct: 694  TKTRIFIPDGRSMIGCLDETRTLEYGQVFVQFSSAGCRQFYDD--SISYYEHKTILKGTV 751

Query: 40   VVAKNPCLHPGDV 2
            VVAKNPCLHPGD+
Sbjct: 752  VVAKNPCLHPGDI 764


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase, partial [Solanum tuberosum]
          Length = 841

 Score =  847 bits (2187), Expect = 0.0
 Identities = 443/731 (60%), Positives = 548/731 (74%), Gaps = 25/731 (3%)
 Frame = -1

Query: 2119 TRAYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLH 1940
            +RA+A+VQF      D II+LAS +RL++G+SYLK WE   D+VQ  R Y   +DG+TL+
Sbjct: 44   SRAFAKVQFVDNISADKIINLAS-KRLYFGSSYLKAWEMKTDIVQL-RAYVDHMDGITLN 101

Query: 1939 FGCQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRG 1760
            FGCQ+S    +VL +    S+KFG G +K +F ++   A YKLQLSYENIWQV  HRP G
Sbjct: 102  FGCQISDDKFAVLGSTE-VSIKFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYG 160

Query: 1759 LTSRFLVIQLFGAPRIFKKVENNVFSFYREEPDDQWVRATDFTSSASIGQSSHLCLELSR 1580
              ++FL+IQLFGAPRI+K++EN+ +SF++E PDDQWVR TDF  S  IG SS LCL+  R
Sbjct: 161  QNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAPSW-IGLSSSLCLQFRR 219

Query: 1579 DVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIVFKICAL 1403
             V L N ++ F +Y E  +   L+ G +F     + LVP V P  G+ +PY I+FKI +L
Sbjct: 220  GVHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEGIAIPYKILFKISSL 279

Query: 1402 VQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITEEYRKNS 1223
            VQHGCIPGP L+  F+ L+DPQRR  ++A IE  LEKLYYLK+CCY+PV+W+TE+Y    
Sbjct: 280  VQHGCIPGPALNVYFFRLVDPQRR--NVACIEQALEKLYYLKECCYDPVRWLTEQYDGYL 337

Query: 1222 RLRAP--AISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYIDNFLRVSFV 1049
            + R P  + S+  D GLVYVRRV +TP KVYFCGPE+NVSNRVLR+YS+ IDNFLRVSFV
Sbjct: 338  KGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFV 397

Query: 1048 DEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX------------------S 923
            DEE EKLYSTDL P+A + N   +T IY RIL  L+ G                     S
Sbjct: 398  DEEWEKLYSTDLLPKASTGNG-IRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNS 456

Query: 922  AWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYEVEKIPDVE 743
             WMFA+   + A  IR WMGDFS+IKNVAKYAARLGQSFGSSKE+LSV ++E+E IPDV+
Sbjct: 457  VWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQSFGSSKETLSVLRHEIEVIPDVK 516

Query: 742  IVRNGTKYVFSDGIGKISAAFAQRVSKKCGYGFIPSAFQIRYAGYKGVVAVDPTSDMKLS 563
            +  +GT YVFSDGIGKISA FA+RV+ KCG  + PSAFQIRY GYKGVVAVDP S MKLS
Sbjct: 517  V--HGTSYVFSDGIGKISADFARRVASKCGLQYTPSAFQIRYGGYKGVVAVDPYSSMKLS 574

Query: 562  LRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQKEAVDLLDAI 383
            LRKSMSK++SDN KLD+L  SKYQPCY+NRQL+TLLSTLGV+D V E+KQKEAVD LDAI
Sbjct: 575  LRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAI 634

Query: 382  LKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKLLEIRTKTRI 203
            L + LKAQEALELMSPGENTNI+K ML+CGY P+AEPFLSMMLQ FRA+KLL++RT++RI
Sbjct: 635  LHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEPFLSMMLQTFRASKLLDLRTRSRI 694

Query: 202  FVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDD----HSGMMSNELKTVRGKVVV 35
            F+P GR+MMGCLDE+RTLEYG+VFVQ++GAG R  S+D    ++   +N    ++G VVV
Sbjct: 695  FIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSEDLHPFNNSRSTNCNFILKGNVVV 754

Query: 34   AKNPCLHPGDV 2
            AKNPCLHPGD+
Sbjct: 755  AKNPCLHPGDI 765


>ref|XP_023929293.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
          Length = 890

 Score =  847 bits (2187), Expect = 0.0
 Identities = 443/745 (59%), Positives = 546/745 (73%), Gaps = 41/745 (5%)
 Frame = -1

Query: 2113 AYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHFG 1934
            AYA +QFTT    + II  AS +RLWYG SYL   E + D+VQKPR +   ++ + LH G
Sbjct: 47   AYAIIQFTTTRYAELIISWAS-KRLWYGASYLTAREMERDIVQKPRTFLHSMENIKLHLG 105

Query: 1933 CQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGLT 1754
            CQ+S      L    N SVKFG G +KL F ++     YKL LSYENIWQ++ H P G +
Sbjct: 106  CQISNGKFVTLWKAVNVSVKFGAGLQKLQFFLSHNNVEYKLDLSYENIWQIELHHPPGQS 165

Query: 1753 SRFLVIQLFGAPRIFKKV--------ENNVFSFYREEPDDQWVRATDFTSSASIGQSSHL 1598
             ++L+IQL GAPRI++K         +N + +++ + PDDQW+RATDFT S  +GQSS L
Sbjct: 166  VKYLLIQLVGAPRIYEKAVRTSGNEFDNPILNYFMQIPDDQWIRATDFTPSCCVGQSSFL 225

Query: 1597 CLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIV 1421
            CLEL     L N ++ F +Y+ES   + L  G SFS   D  LVP+V P  GV LPY I+
Sbjct: 226  CLELPSGHQLPNFQENFAFYKESKEEYILELGSSFSSNLD--LVPVVSPPPGVALPYEIL 283

Query: 1420 FKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITE 1241
            FKI +LVQ+GC+ GP LD+ FY L+DP  R+  ++ IE  LEKL+++K+CCYEP KW++E
Sbjct: 284  FKINSLVQNGCLAGPTLDASFYRLIDP--RKIKISYIECALEKLFHIKECCYEPSKWLSE 341

Query: 1240 EYRKNSRL-----------RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLR 1094
            +YR  S             ++PAISLD  +GLVYV RVQITP KVYFCGPEINVSNRVLR
Sbjct: 342  QYRNYSEQYRNYITSRYPPKSPAISLD--SGLVYVHRVQITPCKVYFCGPEINVSNRVLR 399

Query: 1093 HYSDYIDNFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX---- 926
            HY + IDNFLRVSFVDEEL+K+YSTDLSPRA S N + +TGIY RIL IL++G       
Sbjct: 400  HYLEDIDNFLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKK 459

Query: 925  --------------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKES 788
                          S WMFA+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+
Sbjct: 460  FEFLAFSSSQLRENSLWMFASRKGLNAADIREWMGNFRQIKNVAKYAARLGQSFSSSTET 519

Query: 787  LSVAQYEVEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAG 611
            LSV ++EV+ IPD+EI   G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAG
Sbjct: 520  LSVGRHEVDIIPDIEIKYGGVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAG 579

Query: 610  YKGVVAVDPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDY 431
            YKGVVA+DPTS +KLSLRKSMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV DY
Sbjct: 580  YKGVVAIDPTSFVKLSLRKSMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVEDY 639

Query: 430  VFERKQKEAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQ 251
            VFE+KQ+EAV+ LDAIL +PL+AQEAL++MSPGENTN++KE+L CGY+P++EPFLSMMLQ
Sbjct: 640  VFEKKQREAVEQLDAILTDPLRAQEALDMMSPGENTNVLKEILMCGYRPDSEPFLSMMLQ 699

Query: 250  VFRAAKLLEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM-- 77
             FRA+KLLE+RTKTRIF+P GR+MMGCLDETRTLEYGEVFVQYS    R L +D S    
Sbjct: 700  TFRASKLLELRTKTRIFIPNGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRG 759

Query: 76   MSNELKTVRGKVVVAKNPCLHPGDV 2
              ++ K V GK+VVAKNPCLHPGDV
Sbjct: 760  SGSDQKVVVGKIVVAKNPCLHPGDV 784


>gb|POE89560.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 917

 Score =  847 bits (2187), Expect = 0.0
 Identities = 443/745 (59%), Positives = 546/745 (73%), Gaps = 41/745 (5%)
 Frame = -1

Query: 2113 AYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHFG 1934
            AYA +QFTT    + II  AS +RLWYG SYL   E + D+VQKPR +   ++ + LH G
Sbjct: 74   AYAIIQFTTTRYAELIISWAS-KRLWYGASYLTAREMERDIVQKPRTFLHSMENIKLHLG 132

Query: 1933 CQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGLT 1754
            CQ+S      L    N SVKFG G +KL F ++     YKL LSYENIWQ++ H P G +
Sbjct: 133  CQISNGKFVTLWKAVNVSVKFGAGLQKLQFFLSHNNVEYKLDLSYENIWQIELHHPPGQS 192

Query: 1753 SRFLVIQLFGAPRIFKKV--------ENNVFSFYREEPDDQWVRATDFTSSASIGQSSHL 1598
             ++L+IQL GAPRI++K         +N + +++ + PDDQW+RATDFT S  +GQSS L
Sbjct: 193  VKYLLIQLVGAPRIYEKAVRTSGNEFDNPILNYFMQIPDDQWIRATDFTPSCCVGQSSFL 252

Query: 1597 CLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIV 1421
            CLEL     L N ++ F +Y+ES   + L  G SFS   D  LVP+V P  GV LPY I+
Sbjct: 253  CLELPSGHQLPNFQENFAFYKESKEEYILELGSSFSSNLD--LVPVVSPPPGVALPYEIL 310

Query: 1420 FKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITE 1241
            FKI +LVQ+GC+ GP LD+ FY L+DP  R+  ++ IE  LEKL+++K+CCYEP KW++E
Sbjct: 311  FKINSLVQNGCLAGPTLDASFYRLIDP--RKIKISYIECALEKLFHIKECCYEPSKWLSE 368

Query: 1240 EYRKNSRL-----------RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLR 1094
            +YR  S             ++PAISLD  +GLVYV RVQITP KVYFCGPEINVSNRVLR
Sbjct: 369  QYRNYSEQYRNYITSRYPPKSPAISLD--SGLVYVHRVQITPCKVYFCGPEINVSNRVLR 426

Query: 1093 HYSDYIDNFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX---- 926
            HY + IDNFLRVSFVDEEL+K+YSTDLSPRA S N + +TGIY RIL IL++G       
Sbjct: 427  HYLEDIDNFLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGLVIGDKK 486

Query: 925  --------------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKES 788
                          S WMFA+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+
Sbjct: 487  FEFLAFSSSQLRENSLWMFASRKGLNAADIREWMGNFRQIKNVAKYAARLGQSFSSSTET 546

Query: 787  LSVAQYEVEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAG 611
            LSV ++EV+ IPD+EI   G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAG
Sbjct: 547  LSVGRHEVDIIPDIEIKYGGVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAG 606

Query: 610  YKGVVAVDPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDY 431
            YKGVVA+DPTS +KLSLRKSMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV DY
Sbjct: 607  YKGVVAIDPTSFVKLSLRKSMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVEDY 666

Query: 430  VFERKQKEAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQ 251
            VFE+KQ+EAV+ LDAIL +PL+AQEAL++MSPGENTN++KE+L CGY+P++EPFLSMMLQ
Sbjct: 667  VFEKKQREAVEQLDAILTDPLRAQEALDMMSPGENTNVLKEILMCGYRPDSEPFLSMMLQ 726

Query: 250  VFRAAKLLEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM-- 77
             FRA+KLLE+RTKTRIF+P GR+MMGCLDETRTLEYGEVFVQYS    R L +D S    
Sbjct: 727  TFRASKLLELRTKTRIFIPNGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRG 786

Query: 76   MSNELKTVRGKVVVAKNPCLHPGDV 2
              ++ K V GK+VVAKNPCLHPGDV
Sbjct: 787  SGSDQKVVVGKIVVAKNPCLHPGDV 811


>ref|XP_023927460.1| RNA-dependent RNA polymerase 1-like [Quercus suber]
 gb|POE91878.1| rna-dependent rna polymerase 1 [Quercus suber]
          Length = 1131

 Score =  852 bits (2200), Expect = 0.0
 Identities = 448/738 (60%), Positives = 551/738 (74%), Gaps = 34/738 (4%)
 Frame = -1

Query: 2113 AYARVQFTTREKVDYIIDLASHRRLWYGTSYLKVWEKDMDLVQKPRHYALDVDGVTLHFG 1934
            AYA +QFTT    + II LAS +RLWYGTSYL   E + D+V KPR +   ++ + LH G
Sbjct: 47   AYAIIQFTTTRCAELIISLAS-KRLWYGTSYLTAREMEHDIVPKPRTFLHSMENIELHLG 105

Query: 1933 CQVSKQVLSVLHTMRNASVKFGFGARKLYFGVTEYGASYKLQLSYENIWQVQFHRPRGLT 1754
            CQ+S      L    N SVKFG G +KL F ++     YKL LSYENIWQ++ H P   +
Sbjct: 106  CQISNGKFVTLWKAVNVSVKFGAGLQKLQFFLSHNYLEYKLDLSYENIWQIELHCPPDQS 165

Query: 1753 SRFLVIQLFGAPRIFKKV--------ENNVFSFYREEPDDQWVRATDFTSSASIGQSSHL 1598
            +++L+IQLFGAPRI++K         +N   +++   PDDQW+RATDFT S  +GQSS L
Sbjct: 166  AKYLLIQLFGAPRIYEKAVRTSGNEFDNPFLNYFMHIPDDQWIRATDFTPSCCVGQSSFL 225

Query: 1597 CLELSRDVDL-NLRDYFPYYEESHSPFNLRNGHSFSQRSDAKLVPIVGPARGVCLPYNIV 1421
            CLEL     L N  + F +Y+ES   + L  G SFS   D  LVP+V P  GV LPY I+
Sbjct: 226  CLELPFGHQLPNFEENFAFYKESKEIYILEPGSSFSSNLD--LVPVVSPPPGVALPYEIL 283

Query: 1420 FKICALVQHGCIPGPVLDSKFYELLDPQRRERDLASIEYVLEKLYYLKDCCYEPVKWITE 1241
            FKI +LVQ+GC+ GP LD+ FY L+DP + +  ++ IEY LEKL++LK+CCYEP KW++E
Sbjct: 284  FKINSLVQNGCLAGPTLDANFYRLIDPIKIK--ISYIEYALEKLFHLKECCYEPSKWLSE 341

Query: 1240 EYRK--NSRL--RAPAISLDPDAGLVYVRRVQITPSKVYFCGPEINVSNRVLRHYSDYID 1073
            +YRK   SR   ++PAISLD   GLVYVRRVQITP KVYFCGPEINVSNRVLR+Y + ID
Sbjct: 342  QYRKYITSRYPPKSPAISLD--TGLVYVRRVQITPCKVYFCGPEINVSNRVLRNYPEDID 399

Query: 1072 NFLRVSFVDEELEKLYSTDLSPRAISQNAESKTGIYTRILLILKDGXXX----------- 926
            NFLRVSFVDEEL+K+YSTDLSPRA S N + +TGIY RIL IL++G              
Sbjct: 400  NFLRVSFVDEELDKMYSTDLSPRASSGNEDRRTGIYKRILSILRNGIVIGDKKFEFLAFS 459

Query: 925  -------SAWMFAATGRVNAASIREWMGDFSRIKNVAKYAARLGQSFGSSKESLSVAQYE 767
                   S WMFA+   +NAA IREWMG+F +IKNVAKYAARLGQSF SS E+LSV+++E
Sbjct: 460  SSQLRENSLWMFASREGLNAAGIREWMGNFRQIKNVAKYAARLGQSFSSSTETLSVSRHE 519

Query: 766  VEKIPDVEIVRNGTKYVFSDGIGKISAAFAQRVSKKCGY-GFIPSAFQIRYAGYKGVVAV 590
            ++ IPD+EI R G  YVFSDGIGKISA FA++V+ KC   G  PSAFQIRYAGYKGVVA+
Sbjct: 520  IDIIPDIEIKRGGVNYVFSDGIGKISAEFAKKVALKCNCKGQTPSAFQIRYAGYKGVVAI 579

Query: 589  DPTSDMKLSLRKSMSKFDSDNTKLDILAISKYQPCYMNRQLITLLSTLGVRDYVFERKQK 410
            DPTS +KLSLRKSMSK++S+NTKLD+LA SK+QPC++NRQLITLLSTLGV+DYVFE+KQ+
Sbjct: 580  DPTSFVKLSLRKSMSKYESNNTKLDVLAFSKFQPCFLNRQLITLLSTLGVKDYVFEKKQR 639

Query: 409  EAVDLLDAILKEPLKAQEALELMSPGENTNIMKEMLSCGYKPNAEPFLSMMLQVFRAAKL 230
            EAV+ LDAIL +PL+AQEAL+LMSPGENTN++KE+L CGY+P++EPFLSMMLQ FRA+KL
Sbjct: 640  EAVEQLDAILTDPLRAQEALDLMSPGENTNVLKEILMCGYRPDSEPFLSMMLQTFRASKL 699

Query: 229  LEIRTKTRIFVPKGRSMMGCLDETRTLEYGEVFVQYSGAGKRPLSDDHSGM--MSNELKT 56
            LE+RTKTRIF+P GR+MMGCLDETRTLEYGEVFVQYS    R L +D S      ++ K 
Sbjct: 700  LELRTKTRIFIPNGRAMMGCLDETRTLEYGEVFVQYSRNRHRQLYNDFSMCRGSGSDQKV 759

Query: 55   VRGKVVVAKNPCLHPGDV 2
            V GK+VVAKNPCLHPGDV
Sbjct: 760  VVGKIVVAKNPCLHPGDV 777