BLASTX nr result

ID: Chrysanthemum22_contig00028099 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00028099
         (739 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95768.1| hypothetical protein Ccrd_002146 [Cynara carduncu...    62   1e-07
ref|XP_023751305.1| protein THYLAKOID ASSEMBLY 8, chloroplastic ...    57   5e-06
ref|XP_022030155.1| pentatricopeptide repeat-containing protein ...    57   1e-05

>gb|KVH95768.1| hypothetical protein Ccrd_002146 [Cynara cardunculus var. scolymus]
          Length = 272

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 31/34 (91%), Positives = 33/34 (97%)
 Frame = -3

Query: 737 EVIHSKFSRLLKFDMMAILRELLRQDQSLLALMV 636
           +VIHSKF+RLLKFDMMAILRELLRQD SLLALMV
Sbjct: 91  QVIHSKFTRLLKFDMMAILRELLRQDHSLLALMV 124


>ref|XP_023751305.1| protein THYLAKOID ASSEMBLY 8, chloroplastic [Lactuca sativa]
 gb|PLY94948.1| hypothetical protein LSAT_4X71240 [Lactuca sativa]
          Length = 253

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = -3

Query: 737 EVIHSKFSRLLKFDMMAILRELLRQDQSLLALMV 636
           +VI SKFSRLLKFDMMAILRELLRQ+ S+LALMV
Sbjct: 88  QVIDSKFSRLLKFDMMAILRELLRQENSVLALMV 121


>ref|XP_022030155.1| pentatricopeptide repeat-containing protein At3g46870-like
           [Helianthus annuus]
 gb|OTG33076.1| putative pentatricopeptide repeat protein [Helianthus annuus]
          Length = 301

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -3

Query: 737 EVIHSKFSRLLKFDMMAILRELLRQDQSLLALMV 636
           +VI SKFSRLLKFDMMAILRELLRQD  +LALMV
Sbjct: 136 QVIDSKFSRLLKFDMMAILRELLRQDHCVLALMV 169


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