BLASTX nr result

ID: Chrysanthemum22_contig00027620 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00027620
         (923 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]      83   3e-15

>gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]
          Length = 216

 Score = 83.2 bits (204), Expect = 3e-15
 Identities = 64/174 (36%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
 Frame = -2

Query: 658 QSVDVHRKRKVYFYLLYFNCXXXXXXXXXVTTCKYPLKPDYYIDFSLPRFEKGSANITEE 479
           Q V + RKRK  F+L YF+          VT   YPLKP   I   +P     + N    
Sbjct: 51  QRVPLPRKRKACFFLSYFSFLILYLAFLLVTAFTYPLKPVCNISHIIPLDGAKTEN---- 106

Query: 478 MKQSVYLYLKLQNRNRLVSALYDD-LNITMFYLPSSDTSTYFASTIVPGFYQDKLKPTKV 302
             +S  L L+  NRN L+S  YD  LNI+++Y+ SS+ S YFA T  PGF Q  LK T+V
Sbjct: 107 --ESFNLVLEFINRNPLISVSYDSFLNISVYYISSSNVS-YFAETTAPGFDQQNLKQTEV 163

Query: 301 NVQMFAHGIPGLLQMKEKF--VKFRVNVESIVRFDCKLLCKHKHRFLMDADIGF 146
            V + A     L +M+     +   VN++ IV F C + CK K R   +    F
Sbjct: 164 TVHIPAPESSQLSEMQNTSNPIGLLVNLDFIVGFRC-ISCKEKRRMTFNVTYYF 216


Top