BLASTX nr result

ID: Chrysanthemum22_contig00027286 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00027286
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02426.1| ACT domain-containing protein [Cynara cardunculus...    80   2e-14
gb|PLY64092.1| hypothetical protein LSAT_0X3360 [Lactuca sativa]       66   9e-10
ref|XP_023746628.1| pentatricopeptide repeat-containing protein ...    66   9e-10

>gb|KVI02426.1| ACT domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 1255

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 41/64 (64%), Positives = 48/64 (75%)
 Frame = -3

Query: 388  MILLELLVDAGEVPVAIEHVKKVGEISPPMLHELHAEFXXXXXXXSKQQPMLEFIQVIEA 209
            M+LL+ LVDAGEV VAIEH+K+VGE+ P ML+ELHAE         K QP+LEFIQ IE 
Sbjct: 1010 MMLLKCLVDAGEVVVAIEHMKRVGEMWPSMLNELHAELLSWFTSSPKPQPILEFIQAIEG 1069

Query: 208  LQQN 197
            LQQN
Sbjct: 1070 LQQN 1073


>gb|PLY64092.1| hypothetical protein LSAT_0X3360 [Lactuca sativa]
          Length = 643

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -3

Query: 388 MILLELLVDAGEVPVAIEHVKKVGEISPPMLHELHAEFXXXXXXXSKQQPMLEFIQVIE 212
           MILL+ LVDAGE  +AI HVK+V E SPP+LHEL  E        SKQ+P+LE IQVI+
Sbjct: 577 MILLKRLVDAGEFSIAIGHVKRVVEKSPPLLHELRCELFSWLSSSSKQEPILELIQVID 635


>ref|XP_023746628.1| pentatricopeptide repeat-containing protein At5g14080 [Lactuca
           sativa]
          Length = 645

 Score = 66.2 bits (160), Expect = 9e-10
 Identities = 35/59 (59%), Positives = 42/59 (71%)
 Frame = -3

Query: 388 MILLELLVDAGEVPVAIEHVKKVGEISPPMLHELHAEFXXXXXXXSKQQPMLEFIQVIE 212
           MILL+ LVDAGE  +AI HVK+V E SPP+LHEL  E        SKQ+P+LE IQVI+
Sbjct: 579 MILLKRLVDAGEFSIAIGHVKRVVEKSPPLLHELRCELFSWLSSSSKQEPILELIQVID 637


Top