BLASTX nr result

ID: Chrysanthemum22_contig00027050 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00027050
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY91281.1| hypothetical protein LSAT_3X57261 [Lactuca sativa]      77   1e-15
gb|KVH96333.1| hypothetical protein Ccrd_001586 [Cynara carduncu...    71   7e-14
gb|PLY62853.1| hypothetical protein LSAT_4X17220 [Lactuca sativa]      56   1e-07
gb|KVH97458.1| hypothetical protein Ccrd_000385 [Cynara carduncu...    55   2e-07

>gb|PLY91281.1| hypothetical protein LSAT_3X57261 [Lactuca sativa]
          Length = 103

 Score = 76.6 bits (187), Expect = 1e-15
 Identities = 50/99 (50%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
 Frame = -3

Query: 388 IILQTLQNYCHLIMAFSSTITPWKKXXXXXXXXXXXXXXF--STSRGDMTTMSTQPKARK 215
           I  +TL N  HL+ +FS   TPWK                  STSR +  TMS     RK
Sbjct: 3   IYSKTLHNSRHLMASFSRK-TPWKNHLFSILFLATLLVVPTFSTSRRETITMSPDQIRRK 61

Query: 214 PDATGSSQDRLGIWLSMLPKGKPVPPSAPSKRHNSVIGS 98
            D  GS+  RL I  SMLPKG+PVPPSAPSKRHNSVIGS
Sbjct: 62  NDTVGSNY-RLRIVFSMLPKGQPVPPSAPSKRHNSVIGS 99


>gb|KVH96333.1| hypothetical protein Ccrd_001586 [Cynara cardunculus var. scolymus]
          Length = 69

 Score = 71.2 bits (173), Expect = 7e-14
 Identities = 39/62 (62%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 268 STSRGDMTTMSTQPKARKPD-ATGSSQDRLGIWLSMLPKGKPVPPSAPSKRHNSVIGSKR 92
           STSRGD  TM+  P  RKP+ A GS     G+  SMLPKG PV PSAPSKRHNSV+GS  
Sbjct: 10  STSRGD--TMAMLPNRRKPEFADGSKNHGPGLLFSMLPKGTPVSPSAPSKRHNSVVGSTP 67

Query: 91  HN 86
           HN
Sbjct: 68  HN 69


>gb|PLY62853.1| hypothetical protein LSAT_4X17220 [Lactuca sativa]
          Length = 89

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 32/61 (52%), Positives = 38/61 (62%)
 Frame = -3

Query: 268 STSRGDMTTMSTQPKARKPDATGSSQDRLGIWLSMLPKGKPVPPSAPSKRHNSVIGSKRH 89
           +TSRG  T M  +   +K D    +   L   LSMLPKGKPVPPS PSKRHNSV+ S  +
Sbjct: 33  ATSRGK-TIMQPEHHRKKYDVGSKNPSLL---LSMLPKGKPVPPSGPSKRHNSVVNSTPN 88

Query: 88  N 86
           N
Sbjct: 89  N 89


>gb|KVH97458.1| hypothetical protein Ccrd_000385 [Cynara cardunculus var. scolymus]
          Length = 85

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -3

Query: 268 STSRGDMTTMSTQPKARKPDATGSSQDRLGIWLSMLPKGKPVPPSAPSKRHNSVIGSKRH 89
           +TSRG+ T M  +   RK DA        G++ SMLPKGK VPPS PSKRHNSV+ S  +
Sbjct: 32  ATSRGN-TMMPLKHHPRKYDANP------GLFFSMLPKGKRVPPSGPSKRHNSVVNSTPN 84

Query: 88  N 86
           N
Sbjct: 85  N 85


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