BLASTX nr result

ID: Chrysanthemum22_contig00026252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00026252
         (1425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020097813.1| uncharacterized protein LOC109716680 [Ananas...    67   5e-08

>ref|XP_020097813.1| uncharacterized protein LOC109716680 [Ananas comosus]
          Length = 1052

 Score = 67.4 bits (163), Expect = 5e-08
 Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
 Frame = +3

Query: 1116 MDKSWIKADIGSKTFKDGVQHFIDFAKAR-SIRGXXXXXXXXXXXXXXXXXXXXHAHILQ 1292
            MDKSWI+    SK + DGV +FI FA  + S+RG                      H++ 
Sbjct: 1    MDKSWIEKPRNSKAYMDGVVNFIRFATEKSSVRGKIVCPCRKCSNCSSHTPEVVEEHLMW 60

Query: 1293 YGFLPGYKTWTIHGE----DSIPSQHS-------HPSIVHETSVGEDDIRGLIRD 1424
             GF  GY  W  HGE      I S H+         + VHE ++G+DDIRGL+RD
Sbjct: 61   KGFSVGYTEWIFHGESLSASLIESSHNIFASNTPTSTNVHEGTIGQDDIRGLLRD 115


Top