BLASTX nr result

ID: Chrysanthemum22_contig00026170 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00026170
         (600 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05116.1| hypothetical protein Ccrd_016543, partial [Cynara...    59   9e-07
gb|OTG21445.1| hypothetical protein HannXRQ_Chr07g0204251 [Helia...    57   1e-06
ref|XP_021974063.1| uncharacterized protein LOC110869076 [Helian...    57   1e-06
gb|KVI11749.1| WD40 repeat-containing protein [Cynara cardunculu...    57   3e-06
ref|XP_003610262.1| transducin/WD40 repeat protein [Medicago tru...    57   5e-06
ref|XP_020231294.1| nuclear pore complex protein NUP43 [Cajanus ...    56   1e-05

>gb|KVI05116.1| hypothetical protein Ccrd_016543, partial [Cynara cardunculus var.
            scolymus]
          Length = 1461

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
 Frame = +3

Query: 102  KGFSSLENEDSIHCVCANQV*TFIER*KWIMSS-------GSCNLNANRRLKWALADASH 260
            + F+S  ++D++H +CANQV  F+E+  W  ++         CN+NA+RR +  L   S 
Sbjct: 1120 RDFASRGDKDALHRLCANQVEAFMEQ--WNNNAEFRNEYISRCNMNASRRQR-TLDGGSL 1176

Query: 261  TRDNVAPVRPINVNEKVVKSLVSIP 335
              D+++PV P NVNEKV +SLVS+P
Sbjct: 1177 GPDDISPVLPSNVNEKVDRSLVSVP 1201


>gb|OTG21445.1| hypothetical protein HannXRQ_Chr07g0204251 [Helianthus annuus]
          Length = 1621

 Score = 57.0 bits (136), Expect(2) = 1e-06
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
 Frame = +3

Query: 102  KGFSSLENEDSIHCVCANQV*TFIER*KWIMSS-------GSCNLNANRRLKWALADASH 260
            + F+S  N+D++H +CANQV TF+E  +W  +          CN+NA+RR +  L     
Sbjct: 1280 RDFASHGNKDALHRLCANQVETFME--QWNNNDEFRKEYVSRCNVNASRRQR-TLDGGPL 1336

Query: 261  TRDNVAPVRPINVNEKVVKSLVSIPV 338
              D+VAPV P NVNEKV  S VS+ +
Sbjct: 1337 VPDDVAPVLPGNVNEKVDNSAVSVSI 1362



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 46   LSINQNKRSLSFKKDATTPRDF 111
            LS ++NK    FK+D    RDF
Sbjct: 1261 LSYDKNKNFRQFKEDLMAARDF 1282


>ref|XP_021974063.1| uncharacterized protein LOC110869076 [Helianthus annuus]
          Length = 1595

 Score = 57.0 bits (136), Expect(2) = 1e-06
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
 Frame = +3

Query: 102  KGFSSLENEDSIHCVCANQV*TFIER*KWIMSS-------GSCNLNANRRLKWALADASH 260
            + F+S  N+D++H +CANQV TF+E  +W  +          CN+NA+RR +  L     
Sbjct: 1254 RDFASHGNKDALHRLCANQVETFME--QWNNNDEFRKEYVSRCNVNASRRQR-TLDGGPL 1310

Query: 261  TRDNVAPVRPINVNEKVVKSLVSIPV 338
              D+VAPV P NVNEKV  S VS+ +
Sbjct: 1311 VPDDVAPVLPGNVNEKVDNSAVSVSI 1336



 Score = 23.1 bits (48), Expect(2) = 1e-06
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 46   LSINQNKRSLSFKKDATTPRDF 111
            LS ++NK    FK+D    RDF
Sbjct: 1235 LSYDKNKNFRQFKEDLMAARDF 1256


>gb|KVI11749.1| WD40 repeat-containing protein [Cynara cardunculus var. scolymus]
          Length = 354

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 9/53 (16%)
 Frame = +3

Query: 468 ATGKYNISSQQVLPAMIWQEDEIFGVIKQ---------ENCAINSFDIDRHNP 599
           A+ + NISS++VLP MI  ED I  VIKQ         ENCAINSFDIDR NP
Sbjct: 284 ASNRANISSERVLPVMICSEDGILAVIKQGDEPTELLAENCAINSFDIDRQNP 336


>ref|XP_003610262.1| transducin/WD40 repeat protein [Medicago truncatula]
 gb|AES92459.1| transducin/WD40 repeat protein [Medicago truncatula]
          Length = 351

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
 Frame = +3

Query: 438 QESVNEFKFKATGKYNISSQQVLPAMIWQEDEIFGVIKQ---------ENCAINSFDIDR 590
           +  V E ++    K N SS ++LPAMI  ED I GVI+Q         E CAINSFDIDR
Sbjct: 271 ESEVWEVQYDRCIKSNTSSTRILPAMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDR 330

Query: 591 HNP 599
           HNP
Sbjct: 331 HNP 333


>ref|XP_020231294.1| nuclear pore complex protein NUP43 [Cajanus cajan]
 gb|KYP51447.1| Nucleoporin Nup43 [Cajanus cajan]
          Length = 344

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 9/63 (14%)
 Frame = +3

Query: 438 QESVNEFKFKATGKYNISSQQVLPAMIWQEDEIFGVIKQ---------ENCAINSFDIDR 590
           +  V E ++    K N SS ++LP+MI  ED I GVI+Q         E CAINSFDIDR
Sbjct: 264 ESEVWEVQYDCCIKSNTSSTRILPSMICSEDGILGVIEQGEEPVELLAEPCAINSFDIDR 323

Query: 591 HNP 599
           HNP
Sbjct: 324 HNP 326


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