BLASTX nr result

ID: Chrysanthemum22_contig00026151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00026151
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00188.1| hypothetical protein Ccrd_021561 [Cynara carduncu...   100   5e-22
ref|XP_021979361.1| GATA transcription factor 11-like [Helianthu...    98   3e-21
ref|XP_023738040.1| GATA transcription factor 8-like isoform X3 ...    84   4e-16
ref|XP_023738039.1| GATA transcription factor 8-like isoform X2 ...    84   4e-16
ref|XP_023738038.1| GATA transcription factor 8-like isoform X1 ...    84   5e-16
ref|XP_021973227.1| GATA transcription factor 11-like isoform X2...    77   2e-13
ref|XP_021973226.1| GATA transcription factor 11-like isoform X1...    77   2e-13
gb|KVI09338.1| Zinc finger, GATA-type, partial [Cynara carduncul...    76   5e-13

>gb|KVI00188.1| hypothetical protein Ccrd_021561 [Cynara cardunculus var. scolymus]
          Length = 299

 Score =  100 bits (248), Expect = 5e-22
 Identities = 71/179 (39%), Positives = 102/179 (56%), Gaps = 22/179 (12%)
 Frame = +3

Query: 93  MNSKDNKGMCASVE--NGLYGDVDF-ELLNF-DLP-DTLEGDGCIGDWSMNLGPIPTDIF 257
           M S+DN GMC  ++  + +Y +  F ++LN  DLP + LEGDG   DW++ LGPIP+++F
Sbjct: 1   MESQDN-GMCGVIDYNHEVYDEDCFGDILNILDLPVENLEGDGLAEDWALKLGPIPSEVF 59

Query: 258 AEV-PAVSRVGDKIXXXXXXXXXXXXSMDFLS----------------VDVKESFKSQLK 386
            E+ P VS++G  +            S D L+                +   ++ K Q K
Sbjct: 60  REMLPPVSQIGGVVNDNGGGGG----SADLLTECFVLNDETCQPKCQPILKSKTSKFQPK 115

Query: 387 QHPSTFFDERKMCRIPKSFEAPSPDSVLERRISTSTGKTKTIPLGPEITIPVKARTNRS 563
             P +F + +K   +P+SFEAPSPDSVLERR S ST  +KT+  G EI IPV++RT RS
Sbjct: 116 PQPPSFPEGKKQYPMPRSFEAPSPDSVLERRTSGST--SKTVSFGTEIAIPVRSRTKRS 172


>ref|XP_021979361.1| GATA transcription factor 11-like [Helianthus annuus]
 gb|OTG37486.1| putative zinc finger, NHR/GATA-type [Helianthus annuus]
          Length = 292

 Score = 97.8 bits (242), Expect = 3e-21
 Identities = 66/164 (40%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
 Frame = +3

Query: 99  SKDNKGMCASVENGLYGDVDF-----ELLNFDLPDTLEGDGCIGDWSMNLGPIPTDIFAE 263
           +  +K MC   ++GLY D +        L   +P++L+GD    D+S  LGPIP+++F E
Sbjct: 2   ASQDKSMCID-DHGLYDDDELGGWINNFLKDPVPESLDGDVLSEDFS-KLGPIPSEVFRE 59

Query: 264 VPAVSRVG----DKIXXXXXXXXXXXXSMDFLSVDVKESFKSQLKQHPSTFFDERKMCRI 431
           V     VG    D +              +F  +  K+  KS LK    T F + K  RI
Sbjct: 60  VLTPVGVGGAYADFVTGYGGCSNVGTFEAEFKPIIHKQVSKSHLKPQQPTRFSQEKKYRI 119

Query: 432 PKSFEAPSPDSVLERRISTSTGKTKTIPLGPEITIPVKARTNRS 563
           PKSFEAPSPDSVLERR S+S G  K +  G EI IPV+ RT RS
Sbjct: 120 PKSFEAPSPDSVLERRTSSSAG--KAVSFGIEIAIPVRTRTKRS 161


>ref|XP_023738040.1| GATA transcription factor 8-like isoform X3 [Lactuca sativa]
 gb|PLY70471.1| hypothetical protein LSAT_1X64100 [Lactuca sativa]
          Length = 267

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
 Frame = +3

Query: 141 LYGDVDF--ELLNF-DLP-DTLEGDGCIGDWSMNLGPIPTDIFAEV--PAVSRVGDKIXX 302
           +Y D D+  ++LN  D P +TLEGD  + DW+  LGPIP+++F E+  P V  V      
Sbjct: 5   VYDDDDYLGDILNILDYPVETLEGDALVEDWAEKLGPIPSEVFREILPPPVGNVNG---- 60

Query: 303 XXXXXXXXXXSMDFLSVDVKESFK-SQLKQHPSTFFDERKMC---RIPKSFEAPSPDSVL 470
                     S D       ES+     K H    ++E  +      P+SFEAPSPDSVL
Sbjct: 61  -------GGGSAD----SFPESYLLKDTKPHQPILYEEEDLTLKKSKPRSFEAPSPDSVL 109

Query: 471 ERRISTSTGKTKTIPLGPEITIPVKARTNRS 563
           ERR+S+S G  KTI  G EI IPV+ RT R+
Sbjct: 110 ERRMSSSAG--KTISFGTEIAIPVRTRTKRA 138


>ref|XP_023738039.1| GATA transcription factor 8-like isoform X2 [Lactuca sativa]
          Length = 281

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
 Frame = +3

Query: 141 LYGDVDF--ELLNF-DLP-DTLEGDGCIGDWSMNLGPIPTDIFAEV--PAVSRVGDKIXX 302
           +Y D D+  ++LN  D P +TLEGD  + DW+  LGPIP+++F E+  P V  V      
Sbjct: 19  VYDDDDYLGDILNILDYPVETLEGDALVEDWAEKLGPIPSEVFREILPPPVGNVNG---- 74

Query: 303 XXXXXXXXXXSMDFLSVDVKESFK-SQLKQHPSTFFDERKMC---RIPKSFEAPSPDSVL 470
                     S D       ES+     K H    ++E  +      P+SFEAPSPDSVL
Sbjct: 75  -------GGGSAD----SFPESYLLKDTKPHQPILYEEEDLTLKKSKPRSFEAPSPDSVL 123

Query: 471 ERRISTSTGKTKTIPLGPEITIPVKARTNRS 563
           ERR+S+S G  KTI  G EI IPV+ RT R+
Sbjct: 124 ERRMSSSAG--KTISFGTEIAIPVRTRTKRA 152


>ref|XP_023738038.1| GATA transcription factor 8-like isoform X1 [Lactuca sativa]
          Length = 298

 Score = 84.0 bits (206), Expect = 5e-16
 Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
 Frame = +3

Query: 141 LYGDVDF--ELLNF-DLP-DTLEGDGCIGDWSMNLGPIPTDIFAEV--PAVSRVGDKIXX 302
           +Y D D+  ++LN  D P +TLEGD  + DW+  LGPIP+++F E+  P V  V      
Sbjct: 36  VYDDDDYLGDILNILDYPVETLEGDALVEDWAEKLGPIPSEVFREILPPPVGNVNG---- 91

Query: 303 XXXXXXXXXXSMDFLSVDVKESFK-SQLKQHPSTFFDERKMC---RIPKSFEAPSPDSVL 470
                     S D       ES+     K H    ++E  +      P+SFEAPSPDSVL
Sbjct: 92  -------GGGSAD----SFPESYLLKDTKPHQPILYEEEDLTLKKSKPRSFEAPSPDSVL 140

Query: 471 ERRISTSTGKTKTIPLGPEITIPVKARTNRS 563
           ERR+S+S G  KTI  G EI IPV+ RT R+
Sbjct: 141 ERRMSSSAG--KTISFGTEIAIPVRTRTKRA 169


>ref|XP_021973227.1| GATA transcription factor 11-like isoform X2 [Helianthus annuus]
          Length = 284

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
 Frame = +3

Query: 96  NSKDNKGMCASVENGLYGDVDFELLNFDLP-DTLEGDGCIGDWSMNLGPIPTDIFAE-VP 269
           N+ +N       +   +GD+   L  FDLP ++L+GDG   DW+  LGPIP+++F E VP
Sbjct: 20  NNNNNNNDHRVYDEDCFGDI---LNMFDLPMESLDGDGLAEDWAAKLGPIPSEVFRELVP 76

Query: 270 AVSRVGDKIXXXXXXXXXXXXSMDFLSVDVKESFKSQLKQHPSTFFDERKMCRIPKSFEA 449
              +    +                L+    +  +  LKQ P+ F ++RK+     SF A
Sbjct: 77  PAPQT--SVGSNFGYSMPSPFEYPLLNNKTSQQ-QYHLKQQPA-FDEDRKLYPSQASFHA 132

Query: 450 PSPDSVLERRISTSTGKTKTIPLGPEITIPVKARTNR 560
           PSP+SVLE R  TS+  TK +  G EI+IP++ R+ R
Sbjct: 133 PSPNSVLESR--TSSSNTKGVSFGIEISIPIRTRSKR 167


>ref|XP_021973226.1| GATA transcription factor 11-like isoform X1 [Helianthus annuus]
 gb|OTG20685.1| putative zinc finger, NHR/GATA-type [Helianthus annuus]
          Length = 291

 Score = 77.0 bits (188), Expect = 2e-13
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 2/157 (1%)
 Frame = +3

Query: 96  NSKDNKGMCASVENGLYGDVDFELLNFDLP-DTLEGDGCIGDWSMNLGPIPTDIFAE-VP 269
           N+ +N       +   +GD+   L  FDLP ++L+GDG   DW+  LGPIP+++F E VP
Sbjct: 27  NNNNNNNDHRVYDEDCFGDI---LNMFDLPMESLDGDGLAEDWAAKLGPIPSEVFRELVP 83

Query: 270 AVSRVGDKIXXXXXXXXXXXXSMDFLSVDVKESFKSQLKQHPSTFFDERKMCRIPKSFEA 449
              +    +                L+    +  +  LKQ P+ F ++RK+     SF A
Sbjct: 84  PAPQT--SVGSNFGYSMPSPFEYPLLNNKTSQQ-QYHLKQQPA-FDEDRKLYPSQASFHA 139

Query: 450 PSPDSVLERRISTSTGKTKTIPLGPEITIPVKARTNR 560
           PSP+SVLE R  TS+  TK +  G EI+IP++ R+ R
Sbjct: 140 PSPNSVLESR--TSSSNTKGVSFGIEISIPIRTRSKR 174


>gb|KVI09338.1| Zinc finger, GATA-type, partial [Cynara cardunculus var. scolymus]
          Length = 301

 Score = 75.9 bits (185), Expect = 5e-13
 Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 25/164 (15%)
 Frame = +3

Query: 144 YGDVDFELLNFDLP-DTLEGDGCIGDWSMNLGPIPTDIFAE-VPAVSRVGDKIXXXXXXX 317
           +GD+   L  FD P +++EGDG   DW+  LGPIP+++F E VP VS++G          
Sbjct: 38  FGDI---LNMFDFPMESVEGDGFAEDWASKLGPIPSEVFKELVPPVSQIG--------VG 86

Query: 318 XXXXXSMDF-----------------LSVDVKESFK------SQLKQHPSTFFDERKMCR 428
                S DF                 L++D + S        SQLKQ P TF +++ +  
Sbjct: 87  NSYGSSTDFPFEYPALNSRNLQPKYQLNLDEEPSKDCQIGRISQLKQQP-TFVEKKGVYP 145

Query: 429 IPKSFEAPSPDSVLERRISTSTGKTKTIPLGPEITIPVKARTNR 560
              +FEAPSP+SVLE R S+S   +K I  G EI+IPV+ R+ R
Sbjct: 146 SAAAFEAPSPNSVLESRSSSS--NSKGISFGIEISIPVRTRSKR 187


Top