BLASTX nr result

ID: Chrysanthemum22_contig00026105 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00026105
         (884 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10219.1| hypothetical protein Ccrd_011383 [Cynara carduncu...   107   6e-23
ref|XP_023728435.1| uncharacterized protein LOC111876132 [Lactuc...    70   2e-10

>gb|KVI10219.1| hypothetical protein Ccrd_011383 [Cynara cardunculus var. scolymus]
          Length = 395

 Score =  107 bits (267), Expect = 6e-23
 Identities = 68/166 (40%), Positives = 88/166 (53%), Gaps = 27/166 (16%)
 Frame = +3

Query: 414 GDGVKSYDFLADTKWWLHPQ-LTDSSTFWEPSWET----INIEEYANIKELEAAISDDSQ 578
           GDGV S D  A+TKWW + +   ++ +FW P WET    +  +E   I ELEA I D  Q
Sbjct: 46  GDGVPSNDPPANTKWWFNQKHKVNTCSFWNPQWETFATSVQNDENVRILELEAVIGDVLQ 105

Query: 579 KMPQ--------------VSENPEKIFSEMDPRLTGINKREPWWRTADSNILTSIVSD-- 710
           K P               VS+ P K+ SE++ +  GI K EPWWRT D + L S VS   
Sbjct: 106 KKPTLPEKWMEFDHDKHIVSDEPSKLLSELESQWIGIKKNEPWWRTTDLDDLASFVSQKS 165

Query: 711 -EHINNFDPPQPQINIPGERFVSDKGLASL-----EQVSKLTDSIP 830
            EH +N D P PQ N   +R V +KGLASL     ++ S  TD +P
Sbjct: 166 LEHFDNCDLPLPQTN-KTKRLVCEKGLASLGQELEKEKSSFTDFMP 210


>ref|XP_023728435.1| uncharacterized protein LOC111876132 [Lactuca sativa]
 ref|XP_023728438.1| uncharacterized protein LOC111876132 [Lactuca sativa]
 gb|PLY97703.1| hypothetical protein LSAT_8X5381 [Lactuca sativa]
          Length = 213

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = +3

Query: 414 GDGVKSYDFLADTKWWLHPQLTDSST-FWEPSWETINIEE-YANIKELEA 557
           GDGVK YD   DTKWWLH Q  ++ T FWEPSWET+ +EE YA IKE EA
Sbjct: 40  GDGVKLYDLAGDTKWWLHHQPKENPTSFWEPSWETMEMEEKYAKIKEFEA 89


Top