BLASTX nr result

ID: Chrysanthemum22_contig00025987 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00025987
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021997117.1| golgin candidate 5-like isoform X3 [Helianth...    64   2e-09
ref|XP_021997116.1| golgin candidate 5-like isoform X2 [Helianth...    64   2e-09
ref|XP_021997114.1| golgin candidate 5-like isoform X1 [Helianth...    64   2e-09
ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa] >gi...    64   2e-09
gb|KVH92941.1| hypothetical protein Ccrd_004978 [Cynara carduncu...    60   5e-08
gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, par...    60   5e-08

>ref|XP_021997117.1| golgin candidate 5-like isoform X3 [Helianthus annuus]
          Length = 848

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 44/107 (41%), Positives = 57/107 (53%)
 Frame = +2

Query: 35  ETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAEQLEVSEVP 214
           ET +   +  ES  E  I    D+   + +      ++  G+  EP+ADH + LE    P
Sbjct: 115 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 171

Query: 215 DHKATERESILSSEDQVAHTAHEPDEVESPLDLQKTDIADEPKRQEE 355
           DHK TE ES  SSEDQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 172 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 215


>ref|XP_021997116.1| golgin candidate 5-like isoform X2 [Helianthus annuus]
          Length = 884

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 44/107 (41%), Positives = 57/107 (53%)
 Frame = +2

Query: 35  ETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAEQLEVSEVP 214
           ET +   +  ES  E  I    D+   + +      ++  G+  EP+ADH + LE    P
Sbjct: 113 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 169

Query: 215 DHKATERESILSSEDQVAHTAHEPDEVESPLDLQKTDIADEPKRQEE 355
           DHK TE ES  SSEDQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 170 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 213


>ref|XP_021997114.1| golgin candidate 5-like isoform X1 [Helianthus annuus]
 ref|XP_021997115.1| golgin candidate 5-like isoform X1 [Helianthus annuus]
 gb|OTG04306.1| putative TATA element modulatory factor 1 TATA binding protein
           [Helianthus annuus]
          Length = 886

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 44/107 (41%), Positives = 57/107 (53%)
 Frame = +2

Query: 35  ETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAEQLEVSEVP 214
           ET +   +  ES  E  I    D+   + +      ++  G+  EP+ADH + LE    P
Sbjct: 115 ETHVTASDEVESRDETIIDELADELAAIALNTSNAQKSHIGISEEPSADHTDPLEF---P 171

Query: 215 DHKATERESILSSEDQVAHTAHEPDEVESPLDLQKTDIADEPKRQEE 355
           DHK TE ES  SSEDQ A    E + V  PLDLQKT+  +E KRQEE
Sbjct: 172 DHKLTEPEST-SSEDQAAGIVLESNAVSQPLDLQKTE--EESKRQEE 215


>ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa]
 gb|PLY86902.1| hypothetical protein LSAT_5X130960 [Lactuca sativa]
          Length = 886

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 45/110 (40%), Positives = 56/110 (50%)
 Frame = +2

Query: 29  PLETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAEQLEVSE 208
           PLET   L E   S  EK + TD ++SEE +     +SE    L AE   DH +  E + 
Sbjct: 120 PLETNNPLLEEANSRTEKSVETDVEESEEAVTIDKDESETSDKLEAEAGVDHVDHAEST- 178

Query: 209 VPDHKATERESILSSEDQVAHTAHEPDEVESPLDLQKTDIADEPKRQEEE 358
                        +SEDQVA T+ E +EV   LDLQKT+  DE K QEEE
Sbjct: 179 -------------NSEDQVAGTSLESNEVNIVLDLQKTE--DEVKTQEEE 213


>gb|KVH92941.1| hypothetical protein Ccrd_004978 [Cynara cardunculus var. scolymus]
          Length = 753

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
 Frame = +2

Query: 11  NEIADGPLETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAE 190
           +E A+   ET +ALPE  +SI EKP+ ++   SEE       ++E E    AE + +H +
Sbjct: 72  SEEAEKLAETNIALPE-GDSITEKPVGSNIGISEEATTATNNENEVEASSIAESSVNHPD 130

Query: 191 QLEVSEVPDHKA------------TERESILSSEDQVAHTAHEPDEVESPLDLQKTD 325
           QLE  +   +K             T+ ES  +SEDQV    H+P+EV+  +DLQKT+
Sbjct: 131 QLEFPDHTHYKESPEFGFSEDLGLTKLES-RNSEDQVFGDGHQPNEVDDGIDLQKTE 186


>gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, partial [Cynara
           cardunculus var. scolymus]
          Length = 792

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
 Frame = +2

Query: 14  EIADGPLETKLALPEVEESIAEKPIVTDNDKSEEVIITAMVQSEAETGLHAEPTADHAEQ 193
           +IAD PLE  +A+ E  E++AEK   T+   S+E   TA   SEAE    AE +ADHAEQ
Sbjct: 174 DIADKPLEINVAISEYAENVAEKSAATNIAVSDETTTTAADHSEAEVDSRAELSADHAEQ 233

Query: 194 LEV---------SEVPDHKATE--RESILSSEDQVAHTAHEPDEVESPLDLQKTDIADEP 340
            E          SEV   K +E  ++   +  DQV  T+ E +EV    DL K +  D  
Sbjct: 234 SEFVVRVLSRDSSEVGSSKKSESIQDESTNLSDQVVVTS-ELNEVHPAPDLPKDE--DGL 290

Query: 341 KRQEEE 358
           K Q EE
Sbjct: 291 KIQLEE 296


Top