BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00025857
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...   172   3e-47
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...   144   8e-37
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]   138   8e-35
gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]   138   8e-35
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]   138   8e-35
ref|NP_395469.1| putative reverse transcriptase [Blueberry red r...   137   1e-34
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]   137   2e-34
ref|YP_009254008.1| putative aspartic protease [Water chestnut s...   133   5e-33
ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak ...   131   4e-32
dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]       95   2e-19
gb|ATS17305.1| reverse transcriptase [Cauliflower mosaic virus]        93   1e-18
gb|PKI61428.1| hypothetical protein CRG98_018175 [Punica granatum]     93   1e-18
gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]        92   2e-18
dbj|BAO53589.1| reverse transcriptase [Cauliflower mosaic virus]       92   2e-18
dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]       92   2e-18
dbj|BAO53512.1| reverse transcriptase [Cauliflower mosaic virus]       92   2e-18
dbj|BAO53239.1| reverse transcriptase [Cauliflower mosaic virus]       92   2e-18
gb|AII00790.1| reverse transcriptase [Cauliflower mosaic virus]        92   2e-18
gb|AHX39212.1| reverse transcriptase [Cauliflower mosaic virus]        92   2e-18
gb|AGT42091.1| reverse transcriptase [Cauliflower mosaic virus]        92   2e-18

>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
 sp|P15629.2|POL_SOCMV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 emb|CAC16945.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score =  172 bits (437), Expect = 3e-47
 Identities = 92/179 (51%), Positives = 122/179 (68%), Gaps = 6/179 (3%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADKS H I      + + I  KEF+ P IY+HDSG+DLIIGNNFLKLYQPF Q  +++ +
Sbjct: 64  ADKSKHYIREAISNVFLKIENKEFLIPIIYLHDSGLDLIIGNNFLKLYQPFIQRLETIEL 123

Query: 340 KHK-----ETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPL 176
           + K     +  +++ST I+T+ E +++    I   +E  L  K   IE  L+EVCSE+PL
Sbjct: 124 RWKNLNNPKESQMISTKILTKNEVLKLSFEKIHICLEKYLFFK--TIEEQLEEVCSEHPL 181

Query: 175 DNI-NTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
           D   N N  L+ I+LKDPL EIN+ NRIPY+I+DV+EFKEEC+ LL KG+IRES SPHS
Sbjct: 182 DETKNKNGLLIEIRLKDPLQEINVTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHS 240


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
 sp|Q7TD08.1|POL_CYLCV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 gb|AAP78924.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score =  144 bits (362), Expect = 8e-37
 Identities = 73/187 (39%), Positives = 111/187 (59%), Gaps = 14/187 (7%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADKS+ +IW+   M+ I+I   +F+  T+    SG+D +IGNNFL+LYQPF Q    + +
Sbjct: 54  ADKSVQEIWHRAEMVEIWIRNYKFVAATVCQKSSGMDFVIGNNFLRLYQPFIQGLNYIKL 113

Query: 340 KH------KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKREN--------IERAL 203
           +        +  +++  P+ T ++ ++      K Q  +  +  +EN        +   L
Sbjct: 114 RAPLDKDINQPSKMIYIPVTTPSKILQFAILE-KLQDILFELHVQENSKTPLELKVSSTL 172

Query: 202 QEVCSENPLDNINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIR 23
           +EVC ENPLD  NTN +LV I+L +P  E+N+PN IPYS++D+ EF +EC  L+ KGII 
Sbjct: 173 EEVCDENPLDVKNTNTELVKIELINPEKEVNVPNNIPYSLRDINEFSQECADLVRKGIIE 232

Query: 22  ESSSPHS 2
           ES SPHS
Sbjct: 233 ESKSPHS 239


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  138 bits (348), Expect = 8e-35
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADK   +I  V  MI I I K++F+ PTIY  DSG+ +IIGNNFL+LY PF Q    +T+
Sbjct: 52  ADKRELQITKVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITL 111

Query: 340 KH----KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
           +      +  E++  PI   ++ I+    ++   +E  L+M  E + + LQE  S + L 
Sbjct: 112 RCPKMINQKQEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLM--EQVNKILQERFSLDLLG 169

Query: 172 NINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
             N N +L+ IKLKDP AEI +PN IPY+ +D++EFKE+ + L++KG+IR S SPHS
Sbjct: 170 EKNKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHS 226


>gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  138 bits (348), Expect = 8e-35
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADK   +I  V  MI I I K++F+ PTIY  DSG+ +IIGNNFL+LY PF Q    +T+
Sbjct: 52  ADKRELQITKVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITL 111

Query: 340 KH----KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
           +      +  E++  PI   ++ I+    ++   +E  L+M  E + + LQE  S + L 
Sbjct: 112 RCPKMINQKQEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLM--EQVNKILQERFSLDLLG 169

Query: 172 NINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
             N N +L+ IKLKDP AEI +PN IPY+ +D++EFKE+ + L++KG+IR S SPHS
Sbjct: 170 EKNKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHS 226


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score =  138 bits (348), Expect = 8e-35
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADK   +I  V  MI I I K++F+ PTIY  DSG+ +IIGNNFL+LY PF Q    +T+
Sbjct: 62  ADKRELQITKVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITL 121

Query: 340 KH----KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
           +      +  E++  PI   ++ I+    ++   +E  L+M  E + + LQE  S + L 
Sbjct: 122 RCPKMINQKQEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLM--EQVNKILQERFSLDLLG 179

Query: 172 NINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
             N N +L+ IKLKDP AEI +PN IPY+ +D++EFKE+ + L++KG+IR S SPHS
Sbjct: 180 EKNKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHS 236


>ref|NP_395469.1| putative reverse transcriptase [Blueberry red ringspot virus]
 gb|AAL13274.1|AF404509_4 putative reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score =  137 bits (346), Expect = 1e-34
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADK   +I  V  MI I I K++F+ PTIY  DSG+ +IIGNNFL+LY PF Q    +T+
Sbjct: 52  ADKRELQINKVALMITILIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITL 111

Query: 340 KH----KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
           +      +  E++  PI   ++ I+    ++   +E  L+M  E + + LQE  S + L 
Sbjct: 112 RCPKMINQKQEVIKIPIHHSSQLIKAKLLNLVTNIEEQLLM--EQVNKILQERFSLDLLG 169

Query: 172 NINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
             N N +L+ IKLKDP AEI +PN IPY+ +D++EFKE+ + L++KG+IR S SPHS
Sbjct: 170 EKNKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLINKGLIRPSKSPHS 226


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score =  137 bits (345), Expect = 2e-34
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 4/177 (2%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTI 341
           ADK   +I  V  MI I I K++F+ PTIY  DSG+ +IIGNNFL+LY PF Q    +T+
Sbjct: 75  ADKRELQITKVALMITIIIEKRKFLVPTIYQFDSGVPMIIGNNFLRLYYPFCQYLSYITL 134

Query: 340 KH----KETGELVSTPIVTQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
           +      +  E++  PI   ++ I+    ++   +E  L+M  + + + LQE  S + L 
Sbjct: 135 RCPKMINQKQEVIKIPIHHSSQLIKAKLLNLVTNLEEQLLM--DQVNKILQERFSLDLLG 192

Query: 172 NINTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
             N N +L+ IKLKDP AEI +PN IPY+ +D++EFKE+ + LL+KG+IR S SPHS
Sbjct: 193 EKNKNKELIEIKLKDPNAEIFVPNNIPYTQRDIEEFKEDMEDLLNKGLIRPSKSPHS 249


>ref|YP_009254008.1| putative aspartic protease [Water chestnut soymovirus 1]
 gb|AND65752.1| putative aspartic protease [Water chestnut soymovirus 1]
          Length = 680

 Score =  133 bits (335), Expect = 5e-33
 Identities = 80/177 (45%), Positives = 115/177 (64%), Gaps = 9/177 (5%)
 Frame = -2

Query: 505 HKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTIK---- 338
           +K + +G +I  Y    +F+ P+IY  D+G+ LIIGNNFLKLYQPF QT ++VT+K    
Sbjct: 61  NKAYNIGMLIENY----QFMIPSIYGFDTGLPLIIGNNFLKLYQPFIQTVETVTLKCPKL 116

Query: 337 HKETGELVSTPIVTQTEYIRMLARHIK---FQVEILLIMK-RENIERALQEVCSENPLDN 170
             +  +LV T I   T +I M    IK   F ++  L+++  E +   + E+ S+NPLD 
Sbjct: 117 KGQKSKLVRTKIYN-TSFILMGGGVIKQFCFTIQEELVLRLEEQVWNQIDEMSSDNPLDP 175

Query: 169 I-NTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
           + NTN++LV IKLKDP  E+N+ NRIPY+ +DV EF EE   +L+KGII  ++SPHS
Sbjct: 176 VKNTNSELVEIKLKDPKQEVNVVNRIPYTEQDVLEFVEETSMMLEKGIIEIANSPHS 232


>ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak virus]
 gb|AAA50240.1| reverse transcriptase [Peanut chlorotic streak virus]
          Length = 694

 Score =  131 bits (329), Expect = 4e-32
 Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 6/178 (3%)
 Frame = -2

Query: 517 DKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQTDKSVTIK 338
           +K IH IWY    + + +  K F  P++Y  D+G+ LI+GNNFLKLY PF QT ++++++
Sbjct: 55  NKVIH-IWYKAVDLVLLLEGKRFPLPSVYQQDAGLPLILGNNFLKLYNPFIQTLETISLR 113

Query: 337 ----HKETGELVSTPIV-TQTEYIRMLARHIKFQVEILLIMKRENIERALQEVCSENPLD 173
                K+   L++T I  T + +  ++   +K Q+ I +    + + + L+ +CS+NPLD
Sbjct: 114 CPQLEKQPSSLITTKIYNTFSLFGGVIVNILKQQIYIAI---EDEVTQLLEAICSQNPLD 170

Query: 172 NINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLLDKGIIRESSSPHS 2
                NQ+ V I L DP  E+N+PNRIPY+ KD+ EF+EE  + ++ GI+R+S SPHS
Sbjct: 171 PQKNRNQIIVHIDLIDPTKEVNVPNRIPYTQKDIDEFREETSKQIELGILRQSKSPHS 228


>dbj|BAO53526.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 671

 Score = 94.7 bits (234), Expect = 2e-19
 Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 29/201 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 75  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 134

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K K                  G L S           P+   T  I +L+   +F  ++
Sbjct: 135 TKDKTYPVHIAKLTRAVRVGTEGFLESMKKRSKTQQPEPVNISTNKIAVLSEGRRFGEKL 194

Query: 241 LLIMKR-ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVKE 68
            +  +R + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +E
Sbjct: 195 FITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDREE 253

Query: 67  FKEECQQLLDKGIIRESSSPH 5
           F ++ ++LLD  +I+ S SPH
Sbjct: 254 FDKQIKELLDLKVIKPSKSPH 274


>gb|ATS17305.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 78  ADGSSITINKVCRNIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 137

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 138 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 197

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 198 LFITQQRMQKIEELLEKVCSENPLDPSKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 256

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 257 EFDKQIKELLDLKVIKPSKSPH 278


>gb|PKI61428.1| hypothetical protein CRG98_018175 [Punica granatum]
          Length = 1108

 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 IERALQEVCSENPLDNI-NTNNQLVSIKLKDPLAEINIPNRIPYSIKDVKEFKEECQQLL 41
           IER L  + S+NPLD   N N  LV IKLKDPL E+ +PN IPY+IKDV+EFKEEC+ LL
Sbjct: 343 IERLLDSITSDNPLDQAKNRNKMLVEIKLKDPLKEVKVPNNIPYTIKDVEEFKEECKTLL 402

Query: 40  DKGIIRESSSPHS 2
           + G+IR S S HS
Sbjct: 403 ELGVIRASKSRHS 415


>gb|AHA91331.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 77  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 136

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 137 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 196

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 197 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 255

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 256 EFDKQIKELLDLKVIKPSKSPH 277


>dbj|BAO53589.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 77  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 136

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 137 TKDRTYPVHIVKLTRAVRVGTEGFLESMKKRSKTQQPEPVNISTNKIAVLSEGRRLSEEK 196

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 197 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLNDPSKAIKV-KPMKYSPMDRE 255

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 256 EFDKQIKELLDLKVIKPSKSPH 277


>dbj|BAO53568.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 77  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 136

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 137 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 196

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 197 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 255

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 256 EFDKQIKELLDLKVIKPSKSPH 277


>dbj|BAO53512.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 77  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 136

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 137 TKDRTYPVHIVKLTRAVRVGTEGFLESMKKRSKTQQPEPVNISTNKIAVLSEGRRLSEEK 196

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 197 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 255

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 256 EFDKQIKELLDLKVIKPSKSPH 277


>dbj|BAO53239.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 674

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 77  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 136

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 137 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 196

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 197 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 255

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 256 EFDKQIKELLDLKVIKPSKSPH 277


>gb|AII00790.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 78  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 137

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 138 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 197

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 198 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 256

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 257 EFDKQIKELLDLKVIKPSKSPH 278


>gb|AHX39212.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 78  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 137

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 138 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 197

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 198 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 256

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 257 EFDKQIKELLDLKVIKPSKSPH 278


>gb|AGT42091.1| reverse transcriptase [Cauliflower mosaic virus]
          Length = 675

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 72/202 (35%), Positives = 100/202 (49%), Gaps = 30/202 (14%)
 Frame = -2

Query: 520 ADKSIHKIWYVGRMIPIYINKKEFITPTIYMHDSGIDLIIGNNFLKLYQPFTQ-TDKSVT 344
           AD S   I  V R I + I  + F  PT+Y  +SGID IIGNNF +LY+PF Q TD+ + 
Sbjct: 78  ADGSSITINKVCRDIDLIIAGEIFHIPTVYQQESGIDFIIGNNFCQLYEPFIQFTDRVIF 137

Query: 343 IKHKE----------------TGELVST----------PIVTQTEYIRMLARHIKFQVEI 242
            K +                  G L S           P+   T  I +L+   +   E 
Sbjct: 138 TKDRTYPVHIAKLTRAVRVGTEGFLESMKKRSKTHQPEPVNISTNKIAILSEGRRLSEEK 197

Query: 241 LLIMKR--ENIERALQEVCSENPLDNINTNNQL-VSIKLKDPLAEINIPNRIPYSIKDVK 71
           L I ++  + IE  L++VCSENPLD   T   +  SIKL DP   I +   + YS  D +
Sbjct: 198 LFITQQRMQKIEELLEKVCSENPLDPNKTKQWMKASIKLSDPSKAIKV-KPMKYSPMDRE 256

Query: 70  EFKEECQQLLDKGIIRESSSPH 5
           EF ++ ++LLD  +I+ S SPH
Sbjct: 257 EFDKQIKELLDLKVIKPSKSPH 278