BLASTX nr result
ID: Chrysanthemum22_contig00025409
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum22_contig00025409
(1188 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH89550.1| Double-stranded RNA-binding [Cynara cardunculus v... 142 3e-33
ref|XP_023755529.1| RNA polymerase II C-terminal domain phosphat... 141 9e-33
ref|XP_023755528.1| RNA polymerase II C-terminal domain phosphat... 135 6e-31
ref|XP_022036027.1| RNA polymerase II C-terminal domain phosphat... 132 9e-30
ref|XP_019175373.1| PREDICTED: RNA polymerase II C-terminal doma... 128 2e-28
ref|XP_019175365.1| PREDICTED: RNA polymerase II C-terminal doma... 128 2e-28
ref|XP_019175357.1| PREDICTED: RNA polymerase II C-terminal doma... 128 2e-28
ref|XP_022036026.1| RNA polymerase II C-terminal domain phosphat... 127 6e-28
ref|XP_022892235.1| RNA polymerase II C-terminal domain phosphat... 127 6e-28
ref|XP_010241993.1| PREDICTED: RNA polymerase II C-terminal doma... 125 1e-27
gb|OTF95386.1| putative FCP1-like domain, Double-stranded RNA-bi... 123 8e-27
ref|XP_022012196.1| RNA polymerase II C-terminal domain phosphat... 123 8e-27
ref|XP_009789678.1| PREDICTED: RNA polymerase II C-terminal doma... 120 1e-25
ref|XP_019254201.1| PREDICTED: RNA polymerase II C-terminal doma... 119 2e-25
ref|XP_022036030.1| RNA polymerase II C-terminal domain phosphat... 119 2e-25
ref|XP_022036029.1| RNA polymerase II C-terminal domain phosphat... 119 2e-25
ref|XP_009623032.1| PREDICTED: RNA polymerase II C-terminal doma... 118 6e-25
emb|CDO99573.1| unnamed protein product [Coffea canephora] 116 2e-24
ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal doma... 115 4e-24
ref|XP_009135034.1| PREDICTED: RNA polymerase II C-terminal doma... 114 1e-23
>gb|KVH89550.1| Double-stranded RNA-binding [Cynara cardunculus var. scolymus]
Length = 918
Score = 142 bits (359), Expect = 3e-33
Identities = 113/304 (37%), Positives = 149/304 (49%), Gaps = 28/304 (9%)
Frame = +1
Query: 58 VQYTRRKLSEETTILQHVTQVNLPETT--------------SQQIPSSRRRDPRLKTPSQ 195
VQY ++L + T +L+ T+VNLPET+ S+ P +RRR L+
Sbjct: 510 VQYPNKQLPQATPVLEPFTKVNLPETSLHSSPAREEGEVPESELDPDTRRRLLILQHGMD 569
Query: 196 QNSAPISVPFAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPK 375
S P Q + P +Q + ++ E+ P I+ P P P+
Sbjct: 570 MRDQISSEP--QFPVRPPPMQVSAPRVDSRGGWFPMGEEIG-PRQLNRIAPPKEFPLHPE 626
Query: 376 PNVEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPES--DSDDMQRRLLVLQH 549
P E+ L+ V ETSLL E LP+ DD R L H
Sbjct: 627 P-------MHIEKKHPLRAPLFVQKVETSLLPDRVLENQRLPKEALQRDDRLR----LSH 675
Query: 550 E--------GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTL 705
G+E L + SS R+ ++ D+Y ESPAEYLH I+ KCGT+ EF+ L
Sbjct: 676 SPPVYPSFPGEESSLGQSSSSNRDMDIEAGNSDSYAESPAEYLHYIAYKCGTKAEFKQAL 735
Query: 706 VPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNL----AENYMSVLESGTSC 873
VPS EL FS EV FAGE+IGEG GRTR EA+HQAA SLMNL A+ Y+S L+SGTS
Sbjct: 736 VPSIELQFSFEVWFAGERIGEGSGRTRREAQHQAAEASLMNLAGDVADKYLSRLKSGTSS 795
Query: 874 VPGE 885
V G+
Sbjct: 796 VHGD 799
Score = 88.6 bits (218), Expect = 4e-15
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Frame = +1
Query: 295 LQHVTEVNLPETTAPISVP---FVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSL 465
L V + TAP ++P V PTIP P V+Y KQLP+ T +L+ T+VNLPETSL
Sbjct: 478 LDPVLKTTFQYNTAPAAMPQPTIVPPTIPGPIVQYPNKQLPQATPVLEPFTKVNLPETSL 537
Query: 466 LSSPEREEGELPESDSD-DMQRRLLVLQHEGD 558
SSP REEGE+PES+ D D +RRLL+LQH D
Sbjct: 538 HSSPAREEGEVPESELDPDTRRRLLILQHGMD 569
>ref|XP_023755529.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X2
[Lactuca sativa]
gb|PLY91713.1| hypothetical protein LSAT_7X19061 [Lactuca sativa]
Length = 957
Score = 141 bits (355), Expect = 9e-33
Identities = 126/371 (33%), Positives = 160/371 (43%), Gaps = 86/371 (23%)
Frame = +1
Query: 169 DPRLKTPSQQNSAPISVPFAQPTIPKPTVQCTLK-------------------------- 270
DP +KT Q N+ P S+P P IP P VQ K
Sbjct: 479 DPVIKTTFQYNTPPTSIPIIPPAIPGPIVQYPNKSTPVLEPFTQVNLAETSLHGSPAREE 538
Query: 271 ------QLSEEAHK----LQHVTEVNLPETTAP---------ISVPFVHPT--------- 366
+L + + LQH ++ T+ P +S P V P
Sbjct: 539 GEVPESELDPDTRRRLLILQHGMDMRDQTTSEPQFPVRPPMQVSAPRVEPPRGGWFPMGE 598
Query: 367 ---------IPKPNVEYTLKQLP---EETRILQHVTQVNLPETSLLSSPEREEGELPES- 507
I P E+ L P ++ L+ V+ ET +L E LP+
Sbjct: 599 EMGPRQLNRIVPPPKEFPLHSEPLHIDKKHPLRAPPFVHKVETPILPDRVLESQRLPKEV 658
Query: 508 -DSDDMQRRLLVLQHE--------GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHK 660
DD R L H G+E L SS R+ ++ + + ESPAEYLH
Sbjct: 659 FQRDDRLR----LSHSSSVFPPFSGEESSLGHSLSSNRDMEIEAGNNENFAESPAEYLHF 714
Query: 661 ISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAEN 840
I+ KCGT+VEFR LVPS EL FS EV FAGEKIGEG GRTR EA+HQAA SLMNLA+
Sbjct: 715 IAYKCGTKVEFRQALVPSVELQFSFEVWFAGEKIGEGSGRTRREAQHQAAEASLMNLADK 774
Query: 841 YMSVLESG-----TSCVPGEGNSVNESDEGIYSDGRPS---SPESEPARDLDSRKE--GP 990
Y+S +SG +GNS + + S S S P R LDS+ E GP
Sbjct: 775 YLSRAKSGGGHGEEGRFTNDGNSFGHQSLPLLREESMSMAFSTASGPTRSLDSKLEGPGP 834
Query: 991 NKGTTKALIEL 1023
KG+ AL EL
Sbjct: 835 KKGSIAALNEL 845
Score = 77.4 bits (189), Expect = 2e-11
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 295 LQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLSS 474
L V + T P S+P + P IP P V+Y K P +L+ TQVNL ETSL S
Sbjct: 478 LDPVIKTTFQYNTPPTSIPIIPPAIPGPIVQYPNKSTP----VLEPFTQVNLAETSLHGS 533
Query: 475 PEREEGELPESDSD-DMQRRLLVLQHEGD 558
P REEGE+PES+ D D +RRLL+LQH D
Sbjct: 534 PAREEGEVPESELDPDTRRRLLILQHGMD 562
>ref|XP_023755528.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
[Lactuca sativa]
Length = 962
Score = 135 bits (341), Expect = 6e-31
Identities = 127/376 (33%), Positives = 160/376 (42%), Gaps = 91/376 (24%)
Frame = +1
Query: 169 DPRLKTPSQQNSAPISVPFAQPTIPKPTVQCTLK-------------------------- 270
DP +KT Q N+ P S+P P IP P VQ K
Sbjct: 479 DPVIKTTFQYNTPPTSIPIIPPAIPGPIVQYPNKSTPVLEPFTQVNLAETSLHGSPAREE 538
Query: 271 ------QLSEEAHK----LQHVTEVNLPETTAP---------ISVPFVHPT--------- 366
+L + + LQH ++ T+ P +S P V P
Sbjct: 539 GEVPESELDPDTRRRLLILQHGMDMRDQTTSEPQFPVRPPMQVSAPRVEPPRGGWFPMGE 598
Query: 367 ---------IPKPNVEYTLKQLP---EETRILQHVTQVNLPETSLLSSPEREEGELPES- 507
I P E+ L P ++ L+ V+ ET +L E LP+
Sbjct: 599 EMGPRQLNRIVPPPKEFPLHSEPLHIDKKHPLRAPPFVHKVETPILPDRVLESQRLPKEV 658
Query: 508 -DSDDMQRRLLVLQHE--------GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHK 660
DD R L H G+E L SS R+ ++ + + ESPAEYLH
Sbjct: 659 FQRDDRLR----LSHSSSVFPPFSGEESSLGHSLSSNRDMEIEAGNNENFAESPAEYLHF 714
Query: 661 ISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAEN 840
I+ KCGT+VEFR LVPS EL FS EV FAGEKIGEG GRTR EA+HQAA SLMNLA N
Sbjct: 715 IAYKCGTKVEFRQALVPSVELQFSFEVWFAGEKIGEGSGRTRREAQHQAAEASLMNLAGN 774
Query: 841 -----YMSVLESG-----TSCVPGEGNSVNESDEGIYSDGRPS---SPESEPARDLDSRK 981
Y+S +SG +GNS + + S S S P R LDS+
Sbjct: 775 VFADKYLSRAKSGGGHGEEGRFTNDGNSFGHQSLPLLREESMSMAFSTASGPTRSLDSKL 834
Query: 982 E--GPNKGTTKALIEL 1023
E GP KG+ AL EL
Sbjct: 835 EGPGPKKGSIAALNEL 850
Score = 77.4 bits (189), Expect = 2e-11
Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 295 LQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLSS 474
L V + T P S+P + P IP P V+Y K P +L+ TQVNL ETSL S
Sbjct: 478 LDPVIKTTFQYNTPPTSIPIIPPAIPGPIVQYPNKSTP----VLEPFTQVNLAETSLHGS 533
Query: 475 PEREEGELPESDSD-DMQRRLLVLQHEGD 558
P REEGE+PES+ D D +RRLL+LQH D
Sbjct: 534 PAREEGEVPESELDPDTRRRLLILQHGMD 562
>ref|XP_022036027.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X2
[Helianthus annuus]
gb|OTG29611.1| putative C-terminal domain phosphatase-like 1 [Helianthus annuus]
Length = 949
Score = 132 bits (332), Expect = 9e-30
Identities = 118/334 (35%), Positives = 165/334 (49%), Gaps = 4/334 (1%)
Frame = +1
Query: 67 TRRKLSEETTILQHVTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVPFAQPTIPK 246
TRR+L ILQH + P TT Q P R P P Q SAP P P
Sbjct: 556 TRRRL----LILQHGMDMREPTTTEPQPPQFPVRPP----PPMQVSAPRVEPRGGGWFPV 607
Query: 247 PTVQCTLKQLSEEAHKLQ----HVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEE 414
+ +QL+ A + H +++ + ++ PFVH VE ++ LPE
Sbjct: 608 GE-EMGPRQLNRIAQPPKEFPLHSEAMHIDKKHTLMAPPFVH------KVEASV--LPE- 657
Query: 415 TRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLPSSKR 594
RIL++ LP+ L + + L S S + G+ + + SS R
Sbjct: 658 -RILENQ---RLPKEVL-----QRDDSLRLSHSPPVYPSF-----PGEGSSMGQSSSSNR 703
Query: 595 NRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGI 774
+ ++ G D + ESPAEYLH I+ KCG +VEFRP L+PS +L FS EV FAGEK+GEG
Sbjct: 704 DMDIETGGNDTFAESPAEYLHFIAFKCGAKVEFRPALLPSIDLQFSFEVWFAGEKVGEGT 763
Query: 775 GRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEGNSVNESDEGIYSDGRPSSPESE 954
GRTR EA+HQAA SLMNLA+ Y+S +SG +G +N+ + + + R S +
Sbjct: 764 GRTRREAQHQAAESSLMNLADKYLSRQKSG-----DDGRFINDGNS--FGNLREES-MAF 815
Query: 955 PARDLDSRKEGPNKGTTKALIELVTSHILLLVMR 1056
P ++ E P KG+ AL EL L L +
Sbjct: 816 PTSSGPAKLEIPRKGSIAALNELCMMEGLALTFQ 849
Score = 70.1 bits (170), Expect = 4e-09
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 292 KLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLS 471
KL V + T P S+P V P P V+Y KQL T +L+ +TQV ETSL S
Sbjct: 485 KLDSVLKTTFQYNTTPASMPIVPPG---PIVQYPNKQL---TPVLEPLTQVTHQETSLHS 538
Query: 472 SPEREEGELPESDSD-DMQRRLLVLQHEGD 558
SP REEGE+PES+ D D +RRLL+LQH D
Sbjct: 539 SPAREEGEVPESELDPDTRRRLLILQHGMD 568
>ref|XP_019175373.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
isoform X3 [Ipomoea nil]
Length = 892
Score = 128 bits (321), Expect = 2e-28
Identities = 105/295 (35%), Positives = 146/295 (49%), Gaps = 10/295 (3%)
Frame = +1
Query: 202 SAPISVPFAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPKPN 381
S P SVP QP PT EE + V LP P+S +H +P+
Sbjct: 585 SVPASVPRVQPRSWFPT---------EEEMGPGQLNRV-LPPKDFPLSADSMHMEKHRPH 634
Query: 382 VEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQH-EGD 558
L ++ +HV E+ +LS +P D + + L Q G+
Sbjct: 635 HPPYLHKMDGSVPSDRHV------ESQMLSKEA-----IPSDDRMRLNQSLPRFQSFSGE 683
Query: 559 EDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTE 738
E L + S R+ ++ D+Y E+ LH I++KCGT++E+R TLV S++L F+ E
Sbjct: 684 EVPLAR--SGNRDLDLEPGRFDSYAETEVGALHDIALKCGTKLEYRSTLVSSSDLQFNAE 741
Query: 739 VRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG---NSVNESD 909
FAGEKIG GIGRTR EA+H AA SL NLA+ YMS L +S +PG+G N+++
Sbjct: 742 AWFAGEKIGVGIGRTRREAQHYAAERSLKNLADKYMSRLNPDSSSIPGDGIRNGFANDNN 801
Query: 910 ----EGIYSDGRPSSPESEPARDLDSRKEGPNK--GTTKALIELVTSHILLLVMR 1056
+ I D P S SEP R LDS+ E K G+ AL EL T+ L L +
Sbjct: 802 MFGYQSIKEDVLPFSSTSEPLRGLDSKLEASKKSMGSVAALRELCTTEGLSLAFQ 856
Score = 60.1 bits (144), Expect = 6e-06
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGEL 498
P ++ +S+P PT+ + +QLP+ T +L+ +TQV +TSL SSP REEGE+
Sbjct: 491 PALSSSLSIPT--PTMQTLGMPLPGQQLPQVTPVLKSSLTQVGPQDTSLQSSPAREEGEV 548
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 549 PESELDPDTRRRLLILQHGMD 569
>ref|XP_019175365.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
isoform X2 [Ipomoea nil]
Length = 940
Score = 128 bits (321), Expect = 2e-28
Identities = 105/295 (35%), Positives = 146/295 (49%), Gaps = 10/295 (3%)
Frame = +1
Query: 202 SAPISVPFAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPKPN 381
S P SVP QP PT EE + V LP P+S +H +P+
Sbjct: 569 SVPASVPRVQPRSWFPT---------EEEMGPGQLNRV-LPPKDFPLSADSMHMEKHRPH 618
Query: 382 VEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQH-EGD 558
L ++ +HV E+ +LS +P D + + L Q G+
Sbjct: 619 HPPYLHKMDGSVPSDRHV------ESQMLSKEA-----IPSDDRMRLNQSLPRFQSFSGE 667
Query: 559 EDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTE 738
E L + S R+ ++ D+Y E+ LH I++KCGT++E+R TLV S++L F+ E
Sbjct: 668 EVPLAR--SGNRDLDLEPGRFDSYAETEVGALHDIALKCGTKLEYRSTLVSSSDLQFNAE 725
Query: 739 VRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG---NSVNESD 909
FAGEKIG GIGRTR EA+H AA SL NLA+ YMS L +S +PG+G N+++
Sbjct: 726 AWFAGEKIGVGIGRTRREAQHYAAERSLKNLADKYMSRLNPDSSSIPGDGIRNGFANDNN 785
Query: 910 ----EGIYSDGRPSSPESEPARDLDSRKEGPNK--GTTKALIELVTSHILLLVMR 1056
+ I D P S SEP R LDS+ E K G+ AL EL T+ L L +
Sbjct: 786 MFGYQSIKEDVLPFSSTSEPLRGLDSKLEASKKSMGSVAALRELCTTEGLSLAFQ 840
Score = 60.1 bits (144), Expect = 6e-06
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGEL 498
P ++ +S+P PT+ + +QLP+ T +L+ +TQV +TSL SSP REEGE+
Sbjct: 475 PALSSSLSIPT--PTMQTLGMPLPGQQLPQVTPVLKSSLTQVGPQDTSLQSSPAREEGEV 532
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 533 PESELDPDTRRRLLILQHGMD 553
>ref|XP_019175357.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
isoform X1 [Ipomoea nil]
Length = 956
Score = 128 bits (321), Expect = 2e-28
Identities = 105/295 (35%), Positives = 146/295 (49%), Gaps = 10/295 (3%)
Frame = +1
Query: 202 SAPISVPFAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPKPN 381
S P SVP QP PT EE + V LP P+S +H +P+
Sbjct: 585 SVPASVPRVQPRSWFPT---------EEEMGPGQLNRV-LPPKDFPLSADSMHMEKHRPH 634
Query: 382 VEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQH-EGD 558
L ++ +HV E+ +LS +P D + + L Q G+
Sbjct: 635 HPPYLHKMDGSVPSDRHV------ESQMLSKEA-----IPSDDRMRLNQSLPRFQSFSGE 683
Query: 559 EDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTE 738
E L + S R+ ++ D+Y E+ LH I++KCGT++E+R TLV S++L F+ E
Sbjct: 684 EVPLAR--SGNRDLDLEPGRFDSYAETEVGALHDIALKCGTKLEYRSTLVSSSDLQFNAE 741
Query: 739 VRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG---NSVNESD 909
FAGEKIG GIGRTR EA+H AA SL NLA+ YMS L +S +PG+G N+++
Sbjct: 742 AWFAGEKIGVGIGRTRREAQHYAAERSLKNLADKYMSRLNPDSSSIPGDGIRNGFANDNN 801
Query: 910 ----EGIYSDGRPSSPESEPARDLDSRKEGPNK--GTTKALIELVTSHILLLVMR 1056
+ I D P S SEP R LDS+ E K G+ AL EL T+ L L +
Sbjct: 802 MFGYQSIKEDVLPFSSTSEPLRGLDSKLEASKKSMGSVAALRELCTTEGLSLAFQ 856
Score = 60.1 bits (144), Expect = 6e-06
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGEL 498
P ++ +S+P PT+ + +QLP+ T +L+ +TQV +TSL SSP REEGE+
Sbjct: 491 PALSSSLSIPT--PTMQTLGMPLPGQQLPQVTPVLKSSLTQVGPQDTSLQSSPAREEGEV 548
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 549 PESELDPDTRRRLLILQHGMD 569
>ref|XP_022036026.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
[Helianthus annuus]
Length = 954
Score = 127 bits (318), Expect = 6e-28
Identities = 119/339 (35%), Positives = 165/339 (48%), Gaps = 9/339 (2%)
Frame = +1
Query: 67 TRRKLSEETTILQHVTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVPFAQPTIPK 246
TRR+L ILQH + P TT Q P R P P Q SAP P P
Sbjct: 556 TRRRL----LILQHGMDMREPTTTEPQPPQFPVRPP----PPMQVSAPRVEPRGGGWFPV 607
Query: 247 PTVQCTLKQLSEEAHKLQ----HVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEE 414
+ +QL+ A + H +++ + ++ PFVH VE ++ LPE
Sbjct: 608 GE-EMGPRQLNRIAQPPKEFPLHSEAMHIDKKHTLMAPPFVH------KVEASV--LPE- 657
Query: 415 TRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLPSSKR 594
RIL++ LP+ L + + L S S + G+ + + SS R
Sbjct: 658 -RILENQ---RLPKEVL-----QRDDSLRLSHSPPVYPSF-----PGEGSSMGQSSSSNR 703
Query: 595 NRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGI 774
+ ++ G D + ESPAEYLH I+ KCG +VEFRP L+PS +L FS EV FAGEK+GEG
Sbjct: 704 DMDIETGGNDTFAESPAEYLHFIAFKCGAKVEFRPALLPSIDLQFSFEVWFAGEKVGEGT 763
Query: 775 GRTRTEARHQAAMESLMNLAEN-----YMSVLESGTSCVPGEGNSVNESDEGIYSDGRPS 939
GRTR EA+HQAA SLMNLA N Y+S +SG +G +N+ + + + R
Sbjct: 764 GRTRREAQHQAAESSLMNLAGNVGADKYLSRQKSG-----DDGRFINDGNS--FGNLREE 816
Query: 940 SPESEPARDLDSRKEGPNKGTTKALIELVTSHILLLVMR 1056
S + P ++ E P KG+ AL EL L L +
Sbjct: 817 S-MAFPTSSGPAKLEIPRKGSIAALNELCMMEGLALTFQ 854
Score = 70.1 bits (170), Expect = 4e-09
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 292 KLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLS 471
KL V + T P S+P V P P V+Y KQL T +L+ +TQV ETSL S
Sbjct: 485 KLDSVLKTTFQYNTTPASMPIVPPG---PIVQYPNKQL---TPVLEPLTQVTHQETSLHS 538
Query: 472 SPEREEGELPESDSD-DMQRRLLVLQHEGD 558
SP REEGE+PES+ D D +RRLL+LQH D
Sbjct: 539 SPAREEGEVPESELDPDTRRRLLILQHGMD 568
>ref|XP_022892235.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Olea europaea
var. sylvestris]
Length = 964
Score = 127 bits (318), Expect = 6e-28
Identities = 115/347 (33%), Positives = 167/347 (48%), Gaps = 36/347 (10%)
Frame = +1
Query: 64 YTRRKLSEETTILQ-HVTQVNLPETTSQQIPS--------------SRRRDPRLKTPSQ- 195
+ ++LS+ TT+L+ + Q + ETT Q P+ +RRR L+
Sbjct: 510 FPNQQLSQLTTLLKPQLAQRSPAETTLQNSPAREEGEVPESELDPDTRRRLLILQHGQDT 569
Query: 196 QNSAPISVPFAQPTIP-KPTVQCTLKQLSEEAHKLQHVTEVNLP----ETTAPISVPFVH 360
++ AP+ +P P +P++Q ++ ++ +AH V E P + T P +P +
Sbjct: 570 RDQAPV-----EPQFPARPSMQVSVPRV--QAHGWFPVEEEMSPRQLNQVTPPKEIPAIP 622
Query: 361 PTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLV 540
+IP +E K P + V P +L S + LP + + + L
Sbjct: 623 ESIP---IE---KHRPHHPPFIHKVESSVPPGRALFESQRLPKEALPREEPLRLNQSLPK 676
Query: 541 LQHEGDEDLLEKLPSS-KRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPST 717
ED PSS ++ ++ D Y E+P L I+ KCGT+VEFR LVPS
Sbjct: 677 FHSLSGEDAPIVQPSSGTKDLDLEAGQIDPYPETPVGALQDIAYKCGTKVEFRHGLVPSL 736
Query: 718 ELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEGNS- 894
ELLFS EV FAG+KIGEGIGRTR EA+H+AA SLMNLA+ Y+S + +S +PG+G+
Sbjct: 737 ELLFSVEVIFAGQKIGEGIGRTRREAQHEAAQGSLMNLADKYLS-RKPDSSSLPGDGSRY 795
Query: 895 VNESDEGIYSDGRP-------------SSPESEPARDLDSRKEGPNK 996
N +D G P S SE R LDSR E K
Sbjct: 796 ANPNDNGFIGAVNPFGYHPLPKEESASFSMASESPRILDSRLEASKK 842
>ref|XP_010241993.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nelumbo nucifera]
Length = 948
Score = 125 bits (315), Expect = 1e-27
Identities = 101/269 (37%), Positives = 143/269 (53%), Gaps = 27/269 (10%)
Frame = +1
Query: 364 TIPK-----PNVEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQR 528
TIPK P + K P Q + + ++P L+ +R E+ ++D D M+
Sbjct: 598 TIPKEFPLEPEAVHFDKHRPRRPPFFQGL-ESSIPSDRSLNENQRLAKEVHQTD-DRMRI 655
Query: 529 RLLVLQHEGDEDLLEKLP---SSKRNRGMQ---GDGRDAYVESPAEYLHKISVKCGTEVE 690
V H E+LP SS NR +Q G G Y E+PA + +I++KCGT+VE
Sbjct: 656 NHSVSGHRPLSG--EELPLGRSSSSNRDLQFESGRGNLQYPETPAGVVQEIAMKCGTKVE 713
Query: 691 FRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTS 870
FR LV STEL FS EV F GEK+GEGIGRTR EA+HQAA S+ NLA Y+S ++S +
Sbjct: 714 FRHGLVASTELQFSFEVYFMGEKVGEGIGRTRKEAQHQAAENSIRNLANKYLSHIKSDPN 773
Query: 871 CVPGEGNSVNESDE-GIYSD-----GRPSSPE--------SEPARDLDSRKEGPNK--GT 1002
G+GN ++ +E G+ +D P S E SE +R +++R EG K G+
Sbjct: 774 SSHGDGNKLSHGNENGLLNDTNSFGSLPFSKEDSLSLSTSSESSRFVETRLEGSKKSVGS 833
Query: 1003 TKALIELVTSHILLLVMRLNLLGSDDTYK 1089
AL EL T L L ++ + ++ T K
Sbjct: 834 LSALKELCTVEGLNLAFQMPPISANSTQK 862
Score = 60.8 bits (146), Expect = 3e-06
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 361 PTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSD-DMQRRLL 537
PT P + + KQ P + + + QV PE SL SSP REEGE+PES+ D D +RRLL
Sbjct: 487 PTSQGPMMPFPNKQFPHVATLAKPLVQVGPPELSLQSSPAREEGEVPESELDPDTRRRLL 546
Query: 538 VLQHEGD 558
+LQH D
Sbjct: 547 ILQHGQD 553
>gb|OTF95386.1| putative FCP1-like domain, Double-stranded RNA-binding domain,
HAD-like domain protein [Helianthus annuus]
Length = 915
Score = 123 bits (309), Expect = 8e-27
Identities = 110/360 (30%), Positives = 153/360 (42%), Gaps = 76/360 (21%)
Frame = +1
Query: 178 LKTPSQQNSAPISVPFAQPTIPK-PTVQCTLKQL-------SEEAHK------------- 294
LKT Q NS P + P + P +P P VQC KQL ++ +H+
Sbjct: 452 LKTAFQYNSTP-APPASTPIVPPGPIVQCANKQLLSVLEPLTQVSHQETSLHSSPAREEG 510
Query: 295 -----------------LQHVTEVNLPETTAPISVPFVHPTIP--KPNVEYTLKQLP--- 408
LQH ++ P T+ P P P + P VE +P
Sbjct: 511 EVPESELDPDTRRRLLILQHGMDMREPATSEPPQFPVRPPPMQVLAPRVEPHGGWIPLGE 570
Query: 409 -----EETRILQHVTQVNLPETSLLSSPER------------EEGELPESDSDDMQRRLL 537
+ RI + +L + ++ E LP+ ++M+
Sbjct: 571 DMGPRQFNRIAPSPKEFSLHSEQPMHIDKKHSFRAPPFGQKVEASILPDRVVENMRPPKE 630
Query: 538 VLQHE----------------GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISV 669
VLQ + G+E L SS N + G D + ESPAEYLH I+
Sbjct: 631 VLQRDDRLRLSHSPPVHPLFQGEESSLRHSSSSNGNMDNETGGNDTFAESPAEYLHYIAF 690
Query: 670 KCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMS 849
KCGT+ EFR LVP +L FS EV FAGEKIG+G G TR EA+H AA SLMNLA+ Y++
Sbjct: 691 KCGTKAEFRLALVPGIKLQFSVEVWFAGEKIGDGTGSTRREAQHHAAESSLMNLADKYLA 750
Query: 850 VLESGTSCVPGEGNSVNESDEGIYSDGRPSSPESEPARDLDSRKEGPNKGTTKALIELVT 1029
L+ G EG +N+ + S P+ + ++ E P K + AL EL T
Sbjct: 751 CLKPG-----DEGGLINDGSPFRHPSLLREESTSLPSASVPAKLEIPKKSSIDALNELCT 805
>ref|XP_022012196.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Helianthus
annuus]
ref|XP_022012197.1| RNA polymerase II C-terminal domain phosphatase-like 1 [Helianthus
annuus]
Length = 941
Score = 123 bits (309), Expect = 8e-27
Identities = 110/360 (30%), Positives = 153/360 (42%), Gaps = 76/360 (21%)
Frame = +1
Query: 178 LKTPSQQNSAPISVPFAQPTIPK-PTVQCTLKQL-------SEEAHK------------- 294
LKT Q NS P + P + P +P P VQC KQL ++ +H+
Sbjct: 478 LKTAFQYNSTP-APPASTPIVPPGPIVQCANKQLLSVLEPLTQVSHQETSLHSSPAREEG 536
Query: 295 -----------------LQHVTEVNLPETTAPISVPFVHPTIP--KPNVEYTLKQLP--- 408
LQH ++ P T+ P P P + P VE +P
Sbjct: 537 EVPESELDPDTRRRLLILQHGMDMREPATSEPPQFPVRPPPMQVLAPRVEPHGGWIPLGE 596
Query: 409 -----EETRILQHVTQVNLPETSLLSSPER------------EEGELPESDSDDMQRRLL 537
+ RI + +L + ++ E LP+ ++M+
Sbjct: 597 DMGPRQFNRIAPSPKEFSLHSEQPMHIDKKHSFRAPPFGQKVEASILPDRVVENMRPPKE 656
Query: 538 VLQHE----------------GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISV 669
VLQ + G+E L SS N + G D + ESPAEYLH I+
Sbjct: 657 VLQRDDRLRLSHSPPVHPLFQGEESSLRHSSSSNGNMDNETGGNDTFAESPAEYLHYIAF 716
Query: 670 KCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMS 849
KCGT+ EFR LVP +L FS EV FAGEKIG+G G TR EA+H AA SLMNLA+ Y++
Sbjct: 717 KCGTKAEFRLALVPGIKLQFSVEVWFAGEKIGDGTGSTRREAQHHAAESSLMNLADKYLA 776
Query: 850 VLESGTSCVPGEGNSVNESDEGIYSDGRPSSPESEPARDLDSRKEGPNKGTTKALIELVT 1029
L+ G EG +N+ + S P+ + ++ E P K + AL EL T
Sbjct: 777 CLKPG-----DEGGLINDGSPFRHPSLLREESTSLPSASVPAKLEIPKKSSIDALNELCT 831
>ref|XP_009789678.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana sylvestris]
ref|XP_009789679.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana sylvestris]
ref|XP_009789680.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana sylvestris]
ref|XP_016492729.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana tabacum]
ref|XP_016492730.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana tabacum]
ref|XP_016492731.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana tabacum]
Length = 965
Score = 120 bits (300), Expect = 1e-25
Identities = 111/343 (32%), Positives = 150/343 (43%), Gaps = 24/343 (6%)
Frame = +1
Query: 67 TRRKLSEETTILQH--------VTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVP 222
TRR+L ILQH ++ P T Q+ R P P ++ +P +
Sbjct: 555 TRRRL----LILQHGQDTRDQVSSEPQFPMGTPLQVSVPPRVQPHGWFPVEEEMSPRQLN 610
Query: 223 FAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQ 402
A P P SE H +N P +P + ++P V + ++
Sbjct: 611 RALPPKEFPLN-------SESMH-------INKNRPPHPPFLPKMETSVPSDRVLFESQR 656
Query: 403 LPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLP 582
LP+E + + + S S P G+E L +
Sbjct: 657 LPKEVIPRDDRMRFSQSQPSFHSMP-------------------------GEEVSLGRSS 691
Query: 583 SSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKI 762
SS R+ ++ D Y+E+PA L I+ KCG +VEF+ L+ S EL FS EV FAGEKI
Sbjct: 692 SSSRDLDLEPGHYDPYLETPAGALQDIAFKCGAKVEFKSGLLSSPELQFSVEVWFAGEKI 751
Query: 763 GEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG-NSVNESDEGIYSDGRP- 936
GEGIGRTR EA+ QAA ESLMNLA+ Y+S L+ S G+G N SD G D P
Sbjct: 752 GEGIGRTRREAQRQAAEESLMNLADKYLSRLKPDPSSTAGDGFRFPNASDNGFVDDMSPF 811
Query: 937 ------------SSPESEPARDLDSRKEGPNK--GTTKALIEL 1023
S SEP+R LD R E K G+ +L EL
Sbjct: 812 GYQSYLKEDRVSHSFASEPSRVLDPRLEVLKKSVGSVASLREL 854
Score = 63.5 bits (153), Expect = 5e-07
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGEL 498
P P+ TI P V + + LP+ T +L+ VTQ++ +TSL SSP REEGE+
Sbjct: 487 PALQYPVPPAISQSTIQAPVVPFPAQHLPQVTSVLKSSVTQLSPQDTSLQSSPAREEGEV 546
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 547 PESELDPDTRRRLLILQHGQD 567
>ref|XP_019254201.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana attenuata]
ref|XP_019254202.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana attenuata]
gb|OIS97517.1| rna polymerase ii c-terminal domain phosphatase-like 1 [Nicotiana
attenuata]
Length = 965
Score = 119 bits (299), Expect = 2e-25
Identities = 110/343 (32%), Positives = 150/343 (43%), Gaps = 24/343 (6%)
Frame = +1
Query: 67 TRRKLSEETTILQH--------VTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVP 222
TRR+L ILQH ++ P T Q+ R P P ++ +P +
Sbjct: 555 TRRRL----LILQHGQDTRDQVSSEPQFPMGTPLQVSVPPRVQPHGWFPVEEEMSPRQLN 610
Query: 223 FAQPTIPKPTVQCTLKQLSEEAHKLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQ 402
A P P SE H +N P +P + ++P V + ++
Sbjct: 611 RALPPKEFPLN-------SESMH-------INKNRPPHPPFLPKIETSVPSDRVLFETQR 656
Query: 403 LPEETRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLP 582
LP+E +P + + + P G+E L +
Sbjct: 657 LPKEV----------IPRDDRMRFSQSQPSFHPMP---------------GEEVSLGRSS 691
Query: 583 SSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKI 762
SS R+ ++ D Y+E+PA L I+ KCG +VEF+ L+ S EL FS EV FAGEKI
Sbjct: 692 SSNRDLDLEPGHYDPYLETPAGALQDIAFKCGAKVEFKSGLLSSPELQFSVEVWFAGEKI 751
Query: 763 GEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG-NSVNESDEGIYSDGRP- 936
GEGIGRTR EA+ QAA ESLMNLA+ Y+S L+ S G+G N SD G D P
Sbjct: 752 GEGIGRTRREAQRQAAEESLMNLADKYLSRLKPDLSSTAGDGFRFPNASDNGFVDDMSPF 811
Query: 937 ------------SSPESEPARDLDSRKEGPNK--GTTKALIEL 1023
S SEP+R LD R E K G+ +L EL
Sbjct: 812 GYQSYLKEDRVSHSFASEPSRVLDPRLEVLKKSVGSVASLREL 854
Score = 61.2 bits (147), Expect = 3e-06
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQ-HVTQVNLPETSLLSSPEREEGEL 498
P P+ TI P V + + LP+ T +L+ V Q++ +TSL SSP REEGE+
Sbjct: 487 PALQYPVPPAISQSTIQAPVVPFPAQHLPQVTSVLKASVIQLSPQDTSLQSSPAREEGEV 546
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 547 PESELDPDTRRRLLILQHGQD 567
>ref|XP_022036030.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X5
[Helianthus annuus]
Length = 788
Score = 119 bits (298), Expect = 2e-25
Identities = 99/261 (37%), Positives = 133/261 (50%), Gaps = 4/261 (1%)
Frame = +1
Query: 67 TRRKLSEETTILQHVTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVPFAQPTIPK 246
TRR+L ILQH + P TT Q P R P P Q SAP P P
Sbjct: 556 TRRRL----LILQHGMDMREPTTTEPQPPQFPVRPP----PPMQVSAPRVEPRGGGWFPV 607
Query: 247 PTVQCTLKQLSEEAHKLQ----HVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEE 414
+ +QL+ A + H +++ + ++ PFVH VE ++ LPE
Sbjct: 608 GE-EMGPRQLNRIAQPPKEFPLHSEAMHIDKKHTLMAPPFVH------KVEASV--LPE- 657
Query: 415 TRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLPSSKR 594
RIL++ LP+ L + + L S S + G+ + + SS R
Sbjct: 658 -RILENQ---RLPKEVL-----QRDDSLRLSHSPPVYPSF-----PGEGSSMGQSSSSNR 703
Query: 595 NRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGI 774
+ ++ G D + ESPAEYLH I+ KCG +VEFRP L+PS +L FS EV FAGEK+GEG
Sbjct: 704 DMDIETGGNDTFAESPAEYLHFIAFKCGAKVEFRPALLPSIDLQFSFEVWFAGEKVGEGT 763
Query: 775 GRTRTEARHQAAMESLMNLAE 837
GRTR EA+HQAA SLMNLA+
Sbjct: 764 GRTRREAQHQAAESSLMNLAD 784
Score = 70.1 bits (170), Expect = 3e-09
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 292 KLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLS 471
KL V + T P S+P V P P V+Y KQL T +L+ +TQV ETSL S
Sbjct: 485 KLDSVLKTTFQYNTTPASMPIVPPG---PIVQYPNKQL---TPVLEPLTQVTHQETSLHS 538
Query: 472 SPEREEGELPESDSD-DMQRRLLVLQHEGD 558
SP REEGE+PES+ D D +RRLL+LQH D
Sbjct: 539 SPAREEGEVPESELDPDTRRRLLILQHGMD 568
>ref|XP_022036029.1| RNA polymerase II C-terminal domain phosphatase-like 1 isoform X4
[Helianthus annuus]
Length = 802
Score = 119 bits (298), Expect = 2e-25
Identities = 99/261 (37%), Positives = 133/261 (50%), Gaps = 4/261 (1%)
Frame = +1
Query: 67 TRRKLSEETTILQHVTQVNLPETTSQQIPSSRRRDPRLKTPSQQNSAPISVPFAQPTIPK 246
TRR+L ILQH + P TT Q P R P P Q SAP P P
Sbjct: 556 TRRRL----LILQHGMDMREPTTTEPQPPQFPVRPP----PPMQVSAPRVEPRGGGWFPV 607
Query: 247 PTVQCTLKQLSEEAHKLQ----HVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEE 414
+ +QL+ A + H +++ + ++ PFVH VE ++ LPE
Sbjct: 608 GE-EMGPRQLNRIAQPPKEFPLHSEAMHIDKKHTLMAPPFVH------KVEASV--LPE- 657
Query: 415 TRILQHVTQVNLPETSLLSSPEREEGELPESDSDDMQRRLLVLQHEGDEDLLEKLPSSKR 594
RIL++ LP+ L + + L S S + G+ + + SS R
Sbjct: 658 -RILENQ---RLPKEVL-----QRDDSLRLSHSPPVYPSF-----PGEGSSMGQSSSSNR 703
Query: 595 NRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGI 774
+ ++ G D + ESPAEYLH I+ KCG +VEFRP L+PS +L FS EV FAGEK+GEG
Sbjct: 704 DMDIETGGNDTFAESPAEYLHFIAFKCGAKVEFRPALLPSIDLQFSFEVWFAGEKVGEGT 763
Query: 775 GRTRTEARHQAAMESLMNLAE 837
GRTR EA+HQAA SLMNLA+
Sbjct: 764 GRTRREAQHQAAESSLMNLAD 784
Score = 70.1 bits (170), Expect = 4e-09
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 292 KLQHVTEVNLPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQHVTQVNLPETSLLS 471
KL V + T P S+P V P P V+Y KQL T +L+ +TQV ETSL S
Sbjct: 485 KLDSVLKTTFQYNTTPASMPIVPPG---PIVQYPNKQL---TPVLEPLTQVTHQETSLHS 538
Query: 472 SPEREEGELPESDSD-DMQRRLLVLQHEGD 558
SP REEGE+PES+ D D +RRLL+LQH D
Sbjct: 539 SPAREEGEVPESELDPDTRRRLLILQHGMD 568
>ref|XP_009623032.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana tomentosiformis]
ref|XP_009623033.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Nicotiana tomentosiformis]
Length = 965
Score = 118 bits (295), Expect = 6e-25
Identities = 79/173 (45%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Frame = +1
Query: 553 GDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFS 732
G+E L + SS R+ ++ D Y+E+PA L I+ KCG +VEF+ L+ S EL FS
Sbjct: 682 GEEVSLGRSSSSNRDLDLEPGHYDPYLETPAGALQDIAFKCGAKVEFKSGLLSSPELQFS 741
Query: 733 TEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVPGEG-NSVNESD 909
EV FAGEKIGEGIGRTR EA+ QAA ESLMNLA+ Y+S L+ S G+G N SD
Sbjct: 742 VEVWFAGEKIGEGIGRTRREAQRQAAEESLMNLADKYLSRLKPDPSSTAGDGFRFPNASD 801
Query: 910 EGIYSDGRP-------------SSPESEPARDLDSRKEGPNK--GTTKALIEL 1023
G D P S SEP+R LD R E K G+ +L EL
Sbjct: 802 NGFVDDMSPFGYQSYLKEDRVSHSFASEPSRVLDPRLEVLKKSVGSVASLREL 854
Score = 63.5 bits (153), Expect = 5e-07
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +1
Query: 322 PETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGEL 498
P P+ TI P V + + LP+ T +L+ VTQ++ +TSL SSP REEGE+
Sbjct: 487 PALQYPVPPAISQSTIQAPVVPFPAQHLPQVTSVLKSSVTQLSPQDTSLQSSPAREEGEV 546
Query: 499 PESDSD-DMQRRLLVLQHEGD 558
PES+ D D +RRLL+LQH D
Sbjct: 547 PESELDPDTRRRLLILQHGQD 567
>emb|CDO99573.1| unnamed protein product [Coffea canephora]
Length = 968
Score = 116 bits (290), Expect = 2e-24
Identities = 80/208 (38%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Frame = +1
Query: 451 PETSLLSSPEREEGELPESDSDDMQRRLLVL-QHEGDEDLLEKLPSSKRNRGMQGDGRDA 627
P+ + L + + LP D+ + + + G+E + + S+ R+ ++ D
Sbjct: 650 PDRAFLENQRMLKETLPREDNLRLNQPVASFPSFSGEEASMVRSSSANRDLDLESGQIDP 709
Query: 628 YVESPAEYLHKISVKCGTEVEFRPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQA 807
E+P LH I+ KCGT+VEF+ LV S+EL F EV FAGEKIGEG+GRTR EA+ A
Sbjct: 710 QAETPIGALHDIAFKCGTKVEFKQALVSSSELQFCAEVWFAGEKIGEGLGRTRREAQRHA 769
Query: 808 AMESLMNLAENYMSVLESGTSCVPGEGNSV-NESDEGIYSD----GRPSSPESEPA---- 960
A SLMNLA+ Y+S L+ +S VPGE N S+ G +D G P+ EP
Sbjct: 770 ADSSLMNLADKYISSLKPDSSSVPGEWRRFPNTSNNGFANDFSSWGYQQLPKEEPGSFST 829
Query: 961 -----RDLDSRKEGPNK--GTTKALIEL 1023
R LDSR E + G AL EL
Sbjct: 830 ASMPPRVLDSRLEASKRPVGPIAALKEL 857
Score = 62.4 bits (150), Expect = 1e-06
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Frame = +1
Query: 337 PISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLP-ETSLLSSPEREEGELPESD 510
P S+ + PT+ P V + +QL + T +L++ + Q LP E SL SSP REEGE+PES+
Sbjct: 495 PSSISVLQPTMSGPVVPFPSQQLSQVTSVLKNPINQAILPPEASLQSSPAREEGEVPESE 554
Query: 511 SD-DMQRRLLVLQHEGD 558
D D +RRLL+LQH D
Sbjct: 555 LDPDTRRRLLILQHGQD 571
>ref|XP_006347069.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Solanum tuberosum]
Length = 953
Score = 115 bits (288), Expect = 4e-24
Identities = 89/239 (37%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Frame = +1
Query: 370 PKPNVEYTLKQLPEETRILQH---------VTQVNLPETSLLSSPEREEGE-LPESDSDD 519
P P E+ L PE I +H + ++P +L +R E +P D
Sbjct: 604 PLPPKEFPLN--PESMHINKHRPPHPPFLPKMETSMPSDRVLFENQRLPKEVIPRDDRMR 661
Query: 520 MQRRLLVLQHEGDEDLLEKLPSSKRNRGMQGDGRDAYVESPAEYLHKISVKCGTEVEFRP 699
+ + G+E L + SS R ++ D Y+E+PA L I+ KCG +VEFR
Sbjct: 662 FSQSQPSFRPPGEEVPLGRSSSSNRVLDLEPGHYDPYLETPAGALQDIAFKCGAKVEFRS 721
Query: 700 TLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMSVLESGTSCVP 879
+ + S EL FS EV FAGEK+GEG GRTR EA+ +AA ESLM LA+ Y+S ++ +S
Sbjct: 722 SFLSSPELQFSLEVLFAGEKVGEGTGRTRREAQRRAAEESLMYLADKYLSCIKPDSSSTQ 781
Query: 880 GEG-NSVNESDEGI--------YSDGRPSSPESEPARDLDSRKEGPNK--GTTKALIEL 1023
G+G N SD G Y D S SEP R LD R E K G+ AL EL
Sbjct: 782 GDGFRFPNASDNGFVDNMSPFGYQDRVSHSFASEPPRVLDPRLEVFKKSVGSVGALREL 840
Score = 66.2 bits (160), Expect = 6e-08
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +1
Query: 319 LPETTAPISVPFVHPTIPKPNVEYTLKQLPEETRILQH-VTQVNLPETSLLSSPEREEGE 495
+P P+ P+I P V + + LP+ T +L+ VTQ++ +TSL SSP REEGE
Sbjct: 478 VPALQYPVPPVISQPSIQSPVVPFPTQHLPQVTSVLKSSVTQISPQDTSLQSSPAREEGE 537
Query: 496 LPESDSD-DMQRRLLVLQHEGD 558
+PES+ D D +RRLL+LQH D
Sbjct: 538 VPESELDPDTRRRLLILQHGQD 559
>ref|XP_009135034.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Brassica rapa]
ref|XP_018515453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
[Brassica rapa]
Length = 908
Score = 114 bits (284), Expect = 1e-23
Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 54/292 (18%)
Frame = +1
Query: 136 TSQQIPSSRRRDPRLKTPSQQN-------SAPISVPFAQPT-IPKPTVQCTLKQLSEEAH 291
+S +P++ DPR+ P QQ SAP+ VP P +P P +Q + ++ ++
Sbjct: 472 SSAALPAANT-DPRIAAPVQQPIASASYVSAPVPVPVPVPAPVPVPVMQQAPQPIASASY 530
Query: 292 KLQHVTEVNLPETTAPISVPFVHPT-------------------IPKPNVEYTLKQLPEE 414
V V +P AP+ VP + +P P ++Q P+
Sbjct: 531 VSAPVP-VPVP---APVPVPVMQQAPQPIASASYVSAPVPVPVPVPAPVPVPVMQQAPQP 586
Query: 415 TRILQHVTQVNLP----------ETSLLSSPEREEGELPESDSD-DMQRRLLVLQHEGD- 558
+ I Q P ETSL +SP EGE+PES+ D D +RRLL+L+H D
Sbjct: 587 SAIALPSIQFQQPAIVATHLVPSETSLQNSPA-SEGEVPESELDLDTRRRLLILKHGQDP 645
Query: 559 EDLLEKLPSSKRNRGMQG---------------DGRDAYVESPAEYLHKISVKCGTEVEF 693
D PS + +Q + D E+P LH+I++KCGT+V++
Sbjct: 646 RDAAPSEPSFPKRPPVQAPPPRVQPRNGWFAAEEEMDPKTENPVGLLHEIAIKCGTKVDY 705
Query: 694 RPTLVPSTELLFSTEVRFAGEKIGEGIGRTRTEARHQAAMESLMNLAENYMS 849
+P LV ST + FS E F G+KIG GIG++R EA +AA S+ NLA+ Y+S
Sbjct: 706 KPGLVASTNMRFSIEAWFCGKKIGVGIGKSRREALQKAAEFSIQNLADIYLS 757