BLASTX nr result

ID: Chrysanthemum22_contig00025375 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00025375
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021057111.1| cornifin-B-like [Mus pahari]                       64   3e-10
ref|XP_021986533.1| leucine-rich repeat extensin-like protein 3 ...    58   1e-07
ref|XP_023744784.1| uncharacterized histidine-rich protein DDB_G...    55   2e-06
ref|XP_023757133.1| leucine-rich repeat extensin-like protein 5 ...    52   3e-06

>ref|XP_021057111.1| cornifin-B-like [Mus pahari]
          Length = 138

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +1

Query: 139 HLPQKQSQLTPPALFATTIRLHHPTSPQPFAA-TIQLHHPTAPSQLRPDATTTICRHHPT 315
           H P       PP   +TT++LHHPT+P P ++ T+QLHHP AP    P ++TT+  HHP 
Sbjct: 72  HHPAAPPPAAPPPYSSTTLQLHHPTAPPPCSSTTLQLHHPAAPP---PCSSTTLQLHHPA 128

Query: 316 APP 324
           APP
Sbjct: 129 APP 131



 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 8/59 (13%)
 Frame = +1

Query: 172 PALFATTIRLHHPTSPQPFAAT------IQLHHPTAPSQLRPD--ATTTICRHHPTAPP 324
           P   +TT++LHHPT+P P ++T      +QLHHP AP    P   ++TT+  HHPTAPP
Sbjct: 41  PPCSSTTLQLHHPTAPPPCSSTPLQLHPLQLHHPAAPPPAAPPPYSSTTLQLHHPTAPP 99



 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +1

Query: 118 SLLSFKKHLPQKQSQLTPPALFATTIRLHHPTSPQPFA------ATIQLHHPTAPSQLRP 279
           S  + + H P      +   L    ++LHHP +P P A       T+QLHHPTAP    P
Sbjct: 44  SSTTLQLHHPTAPPPCSSTPLQLHPLQLHHPAAPPPAAPPPYSSTTLQLHHPTAPP---P 100

Query: 280 DATTTICRHHPTAPP 324
            ++TT+  HHP APP
Sbjct: 101 CSSTTLQLHHPAAPP 115



 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 28/62 (45%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
 Frame = +3

Query: 189 HHPTAPSDVA------TTLCRHHPTAPSDCTITTQTRCHHNHLPPPSDCTTNRRHFPGTH 350
           HHP AP   A      TTL  HHPTAP  C+ TT  + HH   PPP   TT + H P   
Sbjct: 72  HHPAAPPPAAPPPYSSTTLQLHHPTAPPPCSSTT-LQLHHPAAPPPCSSTTLQLHHPAAP 130

Query: 351 KP 356
            P
Sbjct: 131 PP 132


>ref|XP_021986533.1| leucine-rich repeat extensin-like protein 3 [Helianthus annuus]
          Length = 186

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 152 SNRNSHHQH--SLPPPSDCTIRRRHNPLPPPSNCTIRLHHHNSDPMPPQPFAATIRLHHQ 325
           +N   HH+H    PPP+    RRRH+P PPP +     +HH   P+PP P A T   HH 
Sbjct: 44  TNTAQHHRHFHHTPPPTVTITRRRHHPSPPPPSA----NHHRPPPLPPSPLATTGHRHHH 99

Query: 326 QTPLP 340
             P P
Sbjct: 100 PLPPP 104


>ref|XP_023744784.1| uncharacterized histidine-rich protein DDB_G0274557-like [Lactuca
           sativa]
          Length = 259

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/76 (39%), Positives = 39/76 (51%)
 Frame = +2

Query: 146 HKSNRNSHHQHSLPPPSDCTIRRRHNPLPPPSNCTIRLHHHNSDPMPPQPFAATIRLHHQ 325
           H  + + HHQH  PPP   T    H+PL PP++    LHH    P+PP P  AT    HQ
Sbjct: 133 HHHHHHHHHQHHHPPPPITTTTHHHSPLSPPTH----LHHPPQPPLPPSPPPATTA--HQ 186

Query: 326 QTPLPRNS*TNAPSSS 373
             P P ++   +PS S
Sbjct: 187 YLPTPTHT---SPSPS 199


>ref|XP_023757133.1| leucine-rich repeat extensin-like protein 5 [Lactuca sativa]
          Length = 100

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +1

Query: 169 PPALFATTIRLHHPTSPQPFAATIQLHHPTAPSQL----RPDATTTICRHHPTAPPTDAT 336
           PP +  TT RLHHP SP P + T  LHH + P  +     P   TT C HHP+ PPT  T
Sbjct: 8   PPPI--TTARLHHP-SPSPTSTTPTLHHLSPPPAMTTNHHPRPITTTCLHHPSPPPTSTT 64


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