BLASTX nr result

ID: Chrysanthemum22_contig00025206 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00025206
         (2892 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH97108.1| polymerase [Orchid fleck dichorhavirus]               197   7e-48
gb|ARJ35804.1| RNA-dependent RNA polymerase [Citrus chlorotic sp...   194   9e-47
ref|YP_001294929.1| polymerase [Orchid fleck dichorhavirus] >gi|...   193   2e-46
dbj|BAX37191.1| polymerase [Orchid fleck dichorhavirus]               192   5e-46
gb|AGN91973.1| polymerase [Citrus leprosis virus nuclear type]        189   3e-45
gb|ARJ35822.1| RNA-dependent RNA polymerase [Citrus leprosis vir...   187   1e-44
gb|AQN78377.1| RNA-dependent RNA polymerase [Citrus leprosis vir...   186   2e-44
gb|AQN78378.1| RNA-dependent RNA polymerase [Citrus leprosis vir...   186   3e-44
gb|AQN78376.1| RNA-dependent RNA polymerase [Citrus leprosis vir...   186   4e-44
gb|AHH44830.1| RNA-dependent RNA polymerase [Coffee ringspot dic...   179   5e-42
ref|YP_009176977.1| RNA-dependent RNA polymerase [Datura yellow ...   176   6e-41
ref|NP_042286.1| polymerase [Sonchus yellow net nucleorhabdoviru...   173   3e-40
dbj|BAI79332.1| L protein [Rice yellow stunt nucleorhabdovirus]       168   1e-38
gb|AUW36419.1| RNA-dependent RNA polymerase [Black currant nucle...   165   1e-37
gb|ARJ54297.1| RNA-dependent RNA polymerase [Potato yellow dwarf...   156   6e-35
gb|AOT55662.1| RNA-directed RNA polymerase [Physostegia chloroti...   155   1e-34
gb|AUY61884.1| RNA-directed RNA polymerase [Physostegia chloroti...   155   1e-34
gb|ARU77002.1| RNA-directed RNA polymerase [Physostegia chloroti...   155   1e-34
ref|YP_009094358.1| RNA-directed RNA polymerase [Eggplant mottle...   155   1e-34
gb|AHL89007.1| RNA-dependent RNA polymerase [Eggplant mottled dw...   155   2e-34

>dbj|BAH97108.1| polymerase [Orchid fleck dichorhavirus]
          Length = 1877

 Score =  197 bits (502), Expect = 7e-48
 Identities = 125/352 (35%), Positives = 184/352 (52%), Gaps = 4/352 (1%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K+I+ +TTPHP+AFL+   G   + CD N++       K ++P  +G  P   
Sbjct: 1081 YRRLSWGKEILSITTPHPAAFLKPVIGD--HQCDHNYVQTKTSGGKLINPHSRGPYPV-- 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y+GSYTREK   TE+A+AYG E L+ RPIHL KLI WRY     M+RI+K  L S+TD  
Sbjct: 1137 YMGSYTREKFKPTEMAAAYGEEDLLSRPIHLMKLINWRYSSSSNMARILKCLLSSLTDAD 1196

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      + GDAEHRY+D ATKH GV N  +   ++ R  T +F KHSRGGKNET+ 
Sbjct: 1197 ATLFYGMMEWIAGDAEHRYQDMATKHGGVPNVAHSILSYVRAHTTTFRKHSRGGKNETLH 1256

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ  ++Y    +SM+             L  K  G +H+HE CDECI   +  G  +   
Sbjct: 1257 FQAVMIY----TSMI------------ALFKKYGGIIHWHESCDECIQQTV--GNVDVVL 1298

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEE----TILTESIEHTYDLRTALSL 891
                  P    N + YV  E+++F Y ++  I   E+    T+  ES+    D RTA   
Sbjct: 1299 TKRVEFPILKGNLFAYVPAESIKFHYHDMKRIRSVEDLGFRTVSYESMS-PLDRRTASIS 1357

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMK 1047
            +L   I    +    ++ ++T S+I +  G V+   ++  +   ++  + M+
Sbjct: 1358 MLSAVIS---SSESRDKSSVTMSSIEMWAGTVNLTEIIPAVCLRVSVAELMR 1406


>gb|ARJ35804.1| RNA-dependent RNA polymerase [Citrus chlorotic spot virus]
          Length = 1874

 Score =  194 bits (493), Expect = 9e-47
 Identities = 126/352 (35%), Positives = 177/352 (50%), Gaps = 3/352 (0%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K I+G+TTPHP+AFL    G   ++CD N++    L    VDP  +G  P   
Sbjct: 1081 YRALSWGKNIMGITTPHPAAFLEYVSGP--HDCDHNYVQTKTLSSGEVDPQVRG--PFMV 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R IHL KLI WRY  D  M++II+  L S+TD  
Sbjct: 1137 YQGSYTKEKFKPTEMAAAYGEEDLLSRAIHLMKLINWRYPPDSSMAKIIRGLLGSLTDAD 1196

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1197 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1256

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ  L+Y   +S   + G                G  H+HE C +CI       + +   
Sbjct: 1257 FQAVLIYTSMMSLFKHYG----------------GIGHWHEKCSKCITRTTADPDFQFKK 1300

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYE---ETILTESIEHTYDLRTALSLL 894
            +     P  P N + YV  E ++F Y +L  I   E   + I++ +     +  TA   L
Sbjct: 1301 RV--SFPMLPGNMFAYVPSEMIKFHYHDLRRIRAQEMADDRIVSLTTMSAREKATAACSL 1358

Query: 895  LGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMKK 1050
            L   I  + +  R N+   T S+I +    +H   L+  +   ++    MK+
Sbjct: 1359 LSAVIAASQSKDRSND---TVSSITMWSSIIHVKDLVPMVCLRLSVDHLMKR 1407


>ref|YP_001294929.1| polymerase [Orchid fleck dichorhavirus]
 dbj|BAE93584.1| polymerase [Orchid fleck dichorhavirus]
          Length = 1877

 Score =  193 bits (490), Expect = 2e-46
 Identities = 123/352 (34%), Positives = 182/352 (51%), Gaps = 4/352 (1%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K+I+ +TTPHP+AFL+   G   + CD N++         ++P  +G  P   
Sbjct: 1081 YRRLSWGKEILSITTPHPAAFLKPVIGD--HQCDHNYVQTKTSGGNLINPHSRGPYPV-- 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y+GSYTREK   TE+A+AYG E L+ RPIHL KLI WRY     M+RI+K  L S+TD  
Sbjct: 1137 YMGSYTREKFKPTEMAAAYGEEDLLSRPIHLMKLINWRYSSSSNMARILKCLLSSLTDAD 1196

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      + GDAEHRY+D ATKH GV N  +   ++ R  T +F KHSRGGKNET+ 
Sbjct: 1197 ATLFYGMMEWIAGDAEHRYQDMATKHGGVPNVAHSILSYVRAHTTTFRKHSRGGKNETLH 1256

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ  ++Y    +SM+             L  K  G +H+HE C ECI   +  G  +   
Sbjct: 1257 FQAVMIY----TSMI------------ALFKKYGGIIHWHESCGECIQQTV--GNVDVVL 1298

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEE----TILTESIEHTYDLRTALSL 891
                  P    N + YV  E+++F Y ++  I   E+    T+  ES+    D RTA   
Sbjct: 1299 TKRVEFPILKGNLFAYVPAESIKFHYHDMKRIRSVEDLGFRTVSYESMS-PLDRRTASIS 1357

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMK 1047
            +L   I    +    ++ ++T S+I +  G V+   ++  +   ++  + M+
Sbjct: 1358 MLSAVIS---SSESRDKSSVTMSSIEMWAGTVNLTEIIPAVCLRVSVAELMR 1406


>dbj|BAX37191.1| polymerase [Orchid fleck dichorhavirus]
          Length = 1877

 Score =  192 bits (487), Expect = 5e-46
 Identities = 123/352 (34%), Positives = 182/352 (51%), Gaps = 4/352 (1%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K+I+ +TTPHP+AFL+   G   + CD N++         ++P  +G  P   
Sbjct: 1081 YRRLSWGKEILSITTPHPAAFLKPVIGD--HQCDHNYVQTKTSGGNLINPHSRGPYPV-- 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y+GSYTREK   TE+A+AYG E L+ RPIHL KLI WRY     M+RI+K  L S+TD  
Sbjct: 1137 YMGSYTREKFKPTEMAAAYGEEDLLSRPIHLMKLINWRYSSSSNMARILKCLLSSLTDAD 1196

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      + GDAEHRY+D ATKH GV N  +   ++ R  T +F KHSRGGKNET+ 
Sbjct: 1197 ATLFYGMMEWIAGDAEHRYQDMATKHGGVPNVAHSILSYVRAHTTTFRKHSRGGKNETLH 1256

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ  ++Y    +SM+             L  K  G +H+HE C ECI   +  G  +   
Sbjct: 1257 FQAVMIY----TSMI------------ALFKKYGGIIHWHESCGECIQQTV--GNVDVVL 1298

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEE----TILTESIEHTYDLRTALSL 891
                  P    N + YV  E+++F Y ++  I   E+    T+  ES+    D RTA   
Sbjct: 1299 TKRVEFPILKGNLFAYVPAESIKFHYHDMKRIRSVEDLGFRTMSYESMS-PLDRRTASIS 1357

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMK 1047
            +L   I    +    ++ ++T S+I +  G V+   ++  +   ++  + M+
Sbjct: 1358 MLSAVIS---SSESRDKSSVTMSSIEMWAGTVNLTEVIPAVCLRVSVAELMR 1406


>gb|AGN91973.1| polymerase [Citrus leprosis virus nuclear type]
          Length = 1877

 Score =  189 bits (481), Expect = 3e-45
 Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 4/352 (1%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K+I+ +TTPHP+AFL    G   + CD N++         ++P  +G  P   
Sbjct: 1081 YRRLSWGKEILSITTPHPAAFLTPVIGD--HQCDHNYVQTKTSGGNLINPHSRGPYPV-- 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y+GSYT+EK   TE+A+AYG E L+ RPIHL KLI WRY     M+R +K  L S+TD  
Sbjct: 1137 YMGSYTKEKFKPTEMAAAYGEEDLLSRPIHLMKLINWRYSSSSNMARTLKCLLSSLTDAD 1196

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      + GDAEHRY+D ATKH GV N  +   ++ R  T +F KHSRGGKNET+ 
Sbjct: 1197 ATLFYGMMEWIAGDAEHRYQDMATKHGGVPNVAHSILSYVRAHTTTFRKHSRGGKNETLH 1256

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ  ++Y    +SM+             L  K  G +H+HE C ECI   +  G  +   
Sbjct: 1257 FQAVMIY----TSMI------------ALFKKYGGIIHWHESCGECIQQTV--GNVDVVL 1298

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEE----TILTESIEHTYDLRTALSL 891
                  P    N + YV  E+++F Y ++  I   E+    T+  ES+  + D RTA   
Sbjct: 1299 TKRVEFPILKGNLFAYVPAESIKFHYHDMKRIRSVEDLGFRTVSYESMS-SLDRRTASIS 1357

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMK 1047
            +L   I    +    ++ ++T S+I +  G V+   ++  +   ++  + M+
Sbjct: 1358 MLSAVIS---SSESRDKSSVTMSSIEMWAGTVNLTEIIPAVCLRVSVAELMR 1406


>gb|ARJ35822.1| RNA-dependent RNA polymerase [Citrus leprosis virus N]
          Length = 1879

 Score =  187 bits (475), Expect = 1e-44
 Identities = 112/277 (40%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R+ SW K IIG+TTPHP+AFLR  Y    + CD N++       + +DP  +G  P   
Sbjct: 1085 YRHVSWGKNIIGITTPHPAAFLR--YSDPDHVCDHNYVQVKTSASESIDPFIRGCYPV-- 1140

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R IHL KLI WRY  +  M+++I+  L S+TD  
Sbjct: 1141 YQGSYTKEKFKPTEMAAAYGEEDLLSRAIHLMKLINWRYHPESQMAKVIRGLLASLTDAE 1200

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1201 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1260

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLI-DPGEHETA 720
            FQ  ++Y   +S   + G                G  H+HE C  CI     DP      
Sbjct: 1261 FQAIIIYTSMMSLFKSYG----------------GIGHWHESCTSCITTTTRDP--LFKV 1302

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYE 831
            PK     PT  +N + YV  E+++F Y ++  I  YE
Sbjct: 1303 PKRI-SFPTLKHNMFAYVPAESVKFHYHDIKRIGMYE 1338


>gb|AQN78377.1| RNA-dependent RNA polymerase [Citrus leprosis virus N]
          Length = 1879

 Score =  186 bits (473), Expect = 2e-44
 Identities = 119/326 (36%), Positives = 172/326 (52%), Gaps = 1/326 (0%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R+ SW K IIG+TTPHP+AFL+  Y    + CD N++       + +DP  +G  P   
Sbjct: 1085 YRHVSWGKNIIGITTPHPAAFLQ--YSDPDHVCDHNYVQVKTSASESIDPFIRGCYPV-- 1140

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R IHL KLI WRY  +  M+++I+  L S+TD  
Sbjct: 1141 YQGSYTKEKFKPTEMAAAYGEEDLLSRAIHLMKLINWRYHPESQMAKVIRGLLASLTDAE 1200

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1201 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1260

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLI-DPGEHETA 720
            FQ  ++Y   +S   + G                G  H+HE C  CI     DP      
Sbjct: 1261 FQAIIIYTSMMSLFKSYG----------------GIGHWHESCTSCITTTTRDP--LFKV 1302

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEETILTESIEHTYDLRTALSLLLG 900
            PK     PT  +N + YV  E+++F Y ++  I  YE  + + +I  T +L  A  L+  
Sbjct: 1303 PKRI-SFPTLKHNMFAYVPAESVKFHYHDIKRIGMYEH-LSSRAISIT-ELSDAEKLVAA 1359

Query: 901  CRIGRALTGSRHNEENLTESTIRLML 978
              +  A+  S   ++  +++   ++L
Sbjct: 1360 SSLLSAVIASCDTKDRTSDTVSSIVL 1385


>gb|AQN78378.1| RNA-dependent RNA polymerase [Citrus leprosis virus N]
          Length = 1879

 Score =  186 bits (472), Expect = 3e-44
 Identities = 111/277 (40%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R+ SW K IIG+TTPHP+AFL+  Y    + CD N++       + +DP  +G  P   
Sbjct: 1085 YRHVSWGKNIIGITTPHPAAFLQ--YSDPDHVCDHNYVQVKTSASESIDPFIRGCYPV-- 1140

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R IHL KLI WRY  +  M+++I+  L S+TD  
Sbjct: 1141 YQGSYTKEKFKPTEMAAAYGEEDLLSRAIHLMKLINWRYHPESQMAKVIRGLLASLTDAE 1200

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1201 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1260

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLI-DPGEHETA 720
            FQ  ++Y   +S   + G                G  H+HE C  CI     DP      
Sbjct: 1261 FQAIIIYTSMMSLFKSYG----------------GISHWHESCTSCITTTTRDP--LFKV 1302

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYE 831
            PK     PT  +N + YV  E+++F Y ++  I  YE
Sbjct: 1303 PKRI-SFPTLKHNMFAYVPAESVKFHYHDIKRIGMYE 1338


>gb|AQN78376.1| RNA-dependent RNA polymerase [Citrus leprosis virus N]
          Length = 1879

 Score =  186 bits (471), Expect = 4e-44
 Identities = 111/277 (40%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R+ SW K IIG+TTPHP+AFL+  Y    + CD N++       + +DP  +G  P   
Sbjct: 1085 YRHVSWGKNIIGITTPHPAAFLQ--YSDPDHVCDHNYVQVKTSASESIDPFIRGCYPV-- 1140

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R IHL KLI WRY  +  M+++I+  L S+TD  
Sbjct: 1141 YQGSYTKEKFKPTEMAAAYGEEDLLSRAIHLMKLINWRYHPESQMAKVIRGLLASLTDAE 1200

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1201 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1260

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLI-DPGEHETA 720
            FQ  ++Y   +S   + G                G  H+HE C  CI     DP      
Sbjct: 1261 FQAIIIYTSMMSLFKSYG----------------GIGHWHESCTSCITTTTRDP--LFKV 1302

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYE 831
            PK     PT  +N + YV  E+++F Y ++  I  YE
Sbjct: 1303 PKRI-SFPTLKHNMFAYVPAESVKFHYHDIKRIGMYE 1338


>gb|AHH44830.1| RNA-dependent RNA polymerase [Coffee ringspot dichorhavirus]
          Length = 1864

 Score =  179 bits (454), Expect = 5e-42
 Identities = 126/353 (35%), Positives = 174/353 (49%), Gaps = 4/353 (1%)
 Frame = +1

Query: 4    WRNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            +R  SW K I+G+TTPHP+AFL+   G   + CD N++    +    VDP  +G  P   
Sbjct: 1081 YRAISWGKNIMGITTPHPAAFLKYITGP--HECDHNYVQTKTMSSGEVDPQVRG--PFHV 1136

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+EK   TE+A+AYG E L+ R          RY ++  M++II+  L S+TD  
Sbjct: 1137 YQGSYTKEKFKPTEMAAAYGEEDLLSR----------RYSQESSMAKIIRGLLGSLTDAE 1186

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
                      ++GDAEHRY+D ATKH GV N  Y   ++ R  T +F KHSRGGKNETI 
Sbjct: 1187 PSLFYGMMEWISGDAEHRYQDMATKHGGVPNIAYSILSYVRANTSTFRKHSRGGKNETIH 1246

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIV-PLIDPGEHETA 720
            FQ  L+Y   +S   + G                G  H+HE CD+CI    +DP      
Sbjct: 1247 FQAVLIYTSMMSLFKHYG----------------GIGHWHETCDKCITRTTVDPDFQFKR 1290

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYE---ETILTESIEHTYDLRTALSL 891
               FP +   P N + YV  E ++F Y +L  I   E   E I++ S   T D   A   
Sbjct: 1291 RVAFPML---PGNMFAYVPSEMIKFHYHDLRRIKAQEMLDERIVSLSSMTTDDKMAAACS 1347

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMKK 1050
            LL   I  + +  R N+   T S+I L    VH   L+  +   ++    MK+
Sbjct: 1348 LLSGVIAASQSKDRSND---TVSSITLWSSIVHVKDLIPMVCLRLSVDHLMKR 1397


>ref|YP_009176977.1| RNA-dependent RNA polymerase [Datura yellow vein nucleorhabdovirus]
 gb|AKH61406.1| RNA-dependent RNA polymerase [Datura yellow vein nucleorhabdovirus]
          Length = 2106

 Score =  176 bits (445), Expect = 6e-41
 Identities = 104/267 (38%), Positives = 150/267 (56%), Gaps = 6/267 (2%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRA-SYGKFHNNCDGNFLLHVNLFRKHVDPPYK----GSG 171
            RN +W K+I+GVTTPHP+A+L   S+G     CD N++  +      V  P+K      G
Sbjct: 1155 RNTTWGKEIVGVTTPHPAAYLHPISHGDGSLMCDQNYISLL------VKRPFKIHELKRG 1208

Query: 172  PCKPYLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSV 351
              +PY GSYT+EK  G+ LASAYG E L+RR + +QKL+ WRYK+   M ++++  L  V
Sbjct: 1209 EFRPYFGSYTKEKFKGSILASAYGDEDLIRRALKIQKLLGWRYKQGTYMYKVVQGILSCV 1268

Query: 352  TDL-PNEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGK 528
            T+  PN+FL +    +TGD EHRY D ATKH G+ +NL    T     T +F+ HS+G  
Sbjct: 1269 TNADPNKFLPTVEE-ITGDVEHRYHDMATKHGGIPSNLIKHYTHVSCNTSTFINHSKGAA 1327

Query: 529  NETIQFQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGE 708
            NE++ FQ  ++Y     SMV        H  SR+        H+HE C+ CI P+I P +
Sbjct: 1328 NESLHFQAAIIY----CSMVGIMSEAHKHKTSRM-------YHFHESCNVCIQPIIQPED 1376

Query: 709  HETAPKYFPPIPTCPNNPYLYVKRENM 789
             E  P +   +  C  N  +YV+  ++
Sbjct: 1377 VERLP-HDVSLMACKQNELMYVEEADI 1402


>ref|NP_042286.1| polymerase [Sonchus yellow net nucleorhabdovirus]
 sp|P31332.1|L_SYNV RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
            AltName: Full=Large structural protein; AltName:
            Full=Replicase; AltName: Full=Transcriptase; Includes:
            RecName: Full=RNA-directed RNA polymerase; Includes:
            RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
            Includes: RecName: Full=GDP
            polyribonucleotidyltransferase; Includes: RecName:
            Full=Cap-specific mRNA
            (nucleoside-2'-O-)-methyltransferase 2
 gb|AAA47896.1| ORF [Sonchus yellow net nucleorhabdovirus]
 gb|AAA50385.1| polymerase [Sonchus yellow net nucleorhabdovirus]
          Length = 2116

 Score =  173 bits (439), Expect = 3e-40
 Identities = 98/263 (37%), Positives = 146/263 (55%), Gaps = 2/263 (0%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYK-GSGPCKP 183
            RN +W K IIGVTTPHP  +L+       ++CD N+   + +  K +   ++   G  +P
Sbjct: 1151 RNWTWGKNIIGVTTPHPLGYLKRERHSESSSCDNNY---IRVLTKRIGNSWELRRGQFRP 1207

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDL- 360
            Y GSYT EK   T LASAYG E +++R I +QKL+ WRY +   +  +I+  L  VTD  
Sbjct: 1208 YFGSYTEEKFKMTTLASAYGDESILKRAIKIQKLLGWRYHQGSSLYNLIQKILTCVTDAD 1267

Query: 361  PNEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETI 540
            PN+FL   P  +TGD EHRY D ATKH G+ +NL +  T     T +F+ HS+G  NE++
Sbjct: 1268 PNKFLPL-PDEITGDVEHRYHDMATKHGGIPSNLIHLYTHASCNTSTFINHSKGAANESL 1326

Query: 541  QFQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETA 720
             FQ  +++   + S+       ++   S          HYHE C++CIV L DP E + +
Sbjct: 1327 HFQAAIIWT-CMQSICRTSASSSVSDIS----------HYHEACNQCIVKLEDPIESDYS 1375

Query: 721  PKYFPPIPTCPNNPYLYVKRENM 789
                  + +CP N  +YVK +++
Sbjct: 1376 TSDI-SLMSCPANDLMYVKEDDI 1397


>dbj|BAI79332.1| L protein [Rice yellow stunt nucleorhabdovirus]
          Length = 1964

 Score =  168 bits (426), Expect = 1e-38
 Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 5/306 (1%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R + W K ++GVT P P  +L+ S+   H  CD N +  V +  +      +  GPCKPY
Sbjct: 1107 RTKGWGKPVLGVTVPTPFEYLQISWTDEHI-CDNNHIT-VRISNQDRQVTTETLGPCKPY 1164

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
            LG+YT+EK   TE+A+AYG E ++ + + + K+I WRY++   MS IIKA  R+VTD+  
Sbjct: 1165 LGAYTKEKFKMTEVAAAYGDEDVLSKSLRILKIINWRYQDGSTMSEIIKAPFRAVTDIDP 1224

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            + ++ +     GD +HR +  A  H G+ N +    +     T ++ KH+RGGKNE I F
Sbjct: 1225 QRMVQESTVTKGDYDHRRKMDARVHGGIPNFVTTPLSHISISTSTWYKHARGGKNENIHF 1284

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAPK 726
            Q C+  I  +  ++       +   S + +++  ++H HE C  CI  + +P    T P+
Sbjct: 1285 QACI--IQTMYQII-------IRTMSNIHSQE--KLHVHECCQTCICEIQEPNLDLTTPQ 1333

Query: 727  YFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEETILTESIEHT-----YDLRTALSL 891
              P  PT   NP +Y+  +++ F Y+   E+ +Y   + +   + +      D  ++LS 
Sbjct: 1334 MIPTFPTLMGNPLVYIPEQSITFDYSRTQEV-DYSRRVGSLDCQRSTDYGWVDAYSSLSW 1392

Query: 892  LLGCRI 909
            L+ C +
Sbjct: 1393 LIMCDV 1398


>gb|AUW36419.1| RNA-dependent RNA polymerase [Black currant nucleorhabdovirus 1]
          Length = 2106

 Score =  165 bits (418), Expect = 1e-37
 Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 3/283 (1%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRA-SYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            RN +W KKIIGV+TPHPS+FL    + +  ++CD N++  V + R       K  G  +P
Sbjct: 1155 RNYTWGKKIIGVSTPHPSSFLECMQHVEGSDDCDHNYI-SVQVKRSFPVRKLK-RGIFRP 1212

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDL- 360
            Y GSYT EK     LASAYG E +++R + +QKL+ WRY+E   M  +I++ LR VT+  
Sbjct: 1213 YFGSYTEEKFKTGILASAYGDEDILKRSLKIQKLLGWRYQEGTYMYNVIQSILRCVTNAD 1272

Query: 361  PNEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETI 540
            PN+FL +    +TGD EHRY D ATKH G+  NL    T     T +F  HS+G  NE++
Sbjct: 1273 PNKFLPTVEE-ITGDVEHRYHDMATKHGGIPTNLIQLYTHASCNTSTFTDHSKGAGNESL 1331

Query: 541  QFQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETA 720
             FQ  ++Y    SSM+        +Y S +        H+HE C  CI  +  P E    
Sbjct: 1332 HFQAAIIY----SSMMTTLLTLRENYCSSI-------YHFHESCKHCIQKIEIPDEGNMV 1380

Query: 721  PKYFPPIPTCPNNPYLYVKRENMEFTY-AELAEISEYEETILT 846
             K    + +CP N  +Y+K E++   Y +++A I + ++   T
Sbjct: 1381 -KEGIKLSSCPGNDLMYIKEEDIPIHYHSQVAFIKDQQKKAQT 1422


>gb|ARJ54297.1| RNA-dependent RNA polymerase [Potato yellow dwarf nucleorhabdovirus]
          Length = 1944

 Score =  156 bits (395), Expect = 6e-35
 Identities = 89/274 (32%), Positives = 141/274 (51%), Gaps = 1/274 (0%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNC-DGNFLLHVNLFRKHVDPPYKGSGPCKP 183
            R  S+ K+++G T PHPS +L A Y   H +C  G+  + +    +  +   + +GPCKP
Sbjct: 1102 RFRSYGKRVLGATVPHPSEYL-ALYPANHPDCLSGSITVRMQPATR--EDRTENTGPCKP 1158

Query: 184  YLGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLP 363
            Y GSYT+E+   TE+ASAYG E ++++  ++QKL+ WRY  +     +I A  R+VT++ 
Sbjct: 1159 YYGSYTKERFRATEIASAYGDEDVLKKVTNIQKLVGWRYSAESKFGELITAVFRAVTNID 1218

Query: 364  NEFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQ 543
               L      + G  +HR    +  H G+ N L   ST+    T ++++HSR GKNE I 
Sbjct: 1219 PAHLRVREEVIRGSYDHRRNTDSNTHGGIPNFLNTLSTYLSICTSTWVEHSRSGKNEYIH 1278

Query: 544  FQTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAP 723
            FQ C         M++       H  +R +  +I E H HE+C  CI  + +     TAP
Sbjct: 1279 FQAC---------MISCILQAMPHLTARDQVPRITEYHAHEVCQTCITEIENINPDRTAP 1329

Query: 724  KYFPPIPTCPNNPYLYVKRENMEFTYAELAEISE 825
            +     PT  +N  +Y+  E++   Y +   I E
Sbjct: 1330 RQSVLFPTLIDNTLVYMDAEDVRIDYHKKVLIEE 1363


>gb|AOT55662.1| RNA-directed RNA polymerase [Physostegia chlorotic mottle virus]
          Length = 1946

 Score =  155 bits (393), Expect = 1e-34
 Identities = 91/273 (33%), Positives = 137/273 (50%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R+ S++K+++GVT PHP+ +L       H    G   +     R+     +   GPCKPY
Sbjct: 1101 RSLSYKKQVLGVTVPHPAEYLNVVPKNGHLCMSGYITIQDG--RQTTGDIWSIKGPCKPY 1158

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
             GSYT+E+   T++ASAYG E +++R + +QKLI WRY  +    +II A L++V+++  
Sbjct: 1159 FGSYTKERFKATDIASAYGDEDVLKRAVSIQKLIGWRYPAESAFGKIIAATLQAVSNVDP 1218

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            E +      + G  +HR    A  H G+ N L   ST     T ++++HSR GKNE I F
Sbjct: 1219 EIVWVREETIRGSYDHRRNTDANTHGGIPNFLNTASTHLSLCTSTWVEHSRSGKNEYIHF 1278

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAPK 726
            Q+C+  I  +  M+        +      T  I E H HE C  CI  +       TAP 
Sbjct: 1279 QSCM--ITCVRFMLR-------YMMIPRFTDSITEYHAHECCSTCITEIEPIPPDSTAPT 1329

Query: 727  YFPPIPTCPNNPYLYVKRENMEFTYAELAEISE 825
                 PT P N  +YV+ EN++  Y     I +
Sbjct: 1330 IPVSFPTLPLNQLVYVESENIKMDYTRRLAIED 1362


>gb|AUY61884.1| RNA-directed RNA polymerase [Physostegia chlorotic mottle virus]
          Length = 1946

 Score =  155 bits (392), Expect = 1e-34
 Identities = 91/273 (33%), Positives = 137/273 (50%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R+ S++K+++GVT PHP+ +L       H    G   +     R+     +   GPCKPY
Sbjct: 1101 RSLSYKKQVLGVTVPHPAEYLNVVPKNGHLCMSGYITIQDG--RQTTGDIWSIKGPCKPY 1158

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
             GSYT+E+   T++ASAYG E +++R + +QKLI WRY  +    +II A L++V+++  
Sbjct: 1159 FGSYTKERFKATDIASAYGDEDVLKRAVSIQKLIGWRYPAESAFGKIIAATLQAVSNVDP 1218

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            E +      + G  +HR    A  H G+ N L   ST     T ++++HSR GKNE I F
Sbjct: 1219 EVVWVREETIRGSYDHRRNTDANTHGGIPNFLNTASTHLSLCTSTWVEHSRSGKNEYIHF 1278

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAPK 726
            Q+C+  I  +  M+        +      T  I E H HE C  CI  +       TAP 
Sbjct: 1279 QSCM--ITCVRFMLR-------YMMIPRFTDSITEYHAHECCSTCITEIEPIPPDSTAPT 1329

Query: 727  YFPPIPTCPNNPYLYVKRENMEFTYAELAEISE 825
                 PT P N  +YV+ EN++  Y     I +
Sbjct: 1330 IPVSFPTLPLNQLVYVESENIKMDYTRRLAIED 1362


>gb|ARU77002.1| RNA-directed RNA polymerase [Physostegia chlorotic mottle virus]
          Length = 1946

 Score =  155 bits (392), Expect = 1e-34
 Identities = 91/273 (33%), Positives = 137/273 (50%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R+ S++K+++GVT PHP+ +L       H    G   +     R+     +   GPCKPY
Sbjct: 1101 RSLSYKKQVLGVTVPHPAEYLNVVPKNGHLCMSGYITIQDG--RQTTGDIWSIKGPCKPY 1158

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
             GSYT+E+   T++ASAYG E +++R + +QKLI WRY  +    +II A L++V+++  
Sbjct: 1159 FGSYTKERFKATDIASAYGDEDVLKRAVSIQKLIGWRYPAESAFGKIIAATLQAVSNVDP 1218

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            E +      + G  +HR    A  H G+ N L   ST     T ++++HSR GKNE I F
Sbjct: 1219 EVVWVREETIRGSYDHRRNTDANTHGGIPNFLNTASTHLSLCTSTWVEHSRSGKNEYIHF 1278

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLKTKQIGEVHYHEICDECIVPLIDPGEHETAPK 726
            Q+C+  I  +  M+        +      T  I E H HE C  CI  +       TAP 
Sbjct: 1279 QSCM--ITCVRFMLR-------YMMIPRFTDSITEYHAHECCSTCITEIEPIPPDSTAPT 1329

Query: 727  YFPPIPTCPNNPYLYVKRENMEFTYAELAEISE 825
                 PT P N  +YV+ EN++  Y     I +
Sbjct: 1330 IPVSFPTLPLNQLVYVESENIKMDYTRRLAIED 1362


>ref|YP_009094358.1| RNA-directed RNA polymerase [Eggplant mottled dwarf
            nucleorhabdovirus]
 gb|AGZ87950.2| RNA-directed RNA polymerase [Eggplant mottled dwarf
            nucleorhabdovirus]
 gb|AHN10100.1| RNA-directed RNA polymerase [Eggplant mottled dwarf
            nucleorhabdovirus]
          Length = 1946

 Score =  155 bits (392), Expect = 1e-34
 Identities = 103/356 (28%), Positives = 166/356 (46%), Gaps = 5/356 (1%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R+ S++K+++GVT PHP+ +L       H    G   +     R+         GPCKPY
Sbjct: 1101 RSLSYKKQVLGVTVPHPAEYLNVVPRNGHLCMSGYITIQDG--RQGGQDILSTKGPCKPY 1158

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
             GSYT+E+   T++ASAYG E +++R + +QKLI WRY  D    RII A L +V+++  
Sbjct: 1159 FGSYTKERFKATDIASAYGDEDVLKRAVSIQKLIGWRYPSDSTFGRIIAATLLAVSNVDP 1218

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            E +      + G  +HR    A  H G+ N L   ST     T ++++HSR GKNE I F
Sbjct: 1219 ETVWVREETIRGSYDHRRNTDANTHGGIPNFLNTASTHLSMCTSTWVEHSRSGKNEYIHF 1278

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLK-----TKQIGEVHYHEICDECIVPLIDPGEH 711
            Q+C++                + Y  R       +  I E H HE C  CI  +      
Sbjct: 1279 QSCMI--------------TCVRYMLRYMRGPRISDAITEYHAHECCPTCITEIEPIPPD 1324

Query: 712  ETAPKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEETILTESIEHTYDLRTALSL 891
             TAP      PT P+N  +YV+ E+++  Y     I E  ++I    +E    L ++   
Sbjct: 1325 STAPTMQVSFPTLPHNLLVYVESESIKMDYTRRLAI-EDSQSIAPMILEDITVLGSSRDR 1383

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMKKMIT 1059
            ++ C     +  +   +  +++S + L   KV     +      IT  +++  M++
Sbjct: 1384 IIDCISTILVIEALGRKHGMSKSFMLLAREKVDVDACLLSFRKKITLLRYIDPMMS 1439


>gb|AHL89007.1| RNA-dependent RNA polymerase [Eggplant mottled dwarf
            nucleorhabdovirus]
          Length = 1946

 Score =  155 bits (391), Expect = 2e-34
 Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 5/355 (1%)
 Frame = +1

Query: 7    RNESWEKKIIGVTTPHPSAFLRASYGKFHNNCDGNFLLHVNLFRKHVDPPYKGSGPCKPY 186
            R+ S++K+++GVT PHP+ +L       H    G   +     R+         GPCKPY
Sbjct: 1101 RSLSYKKQVLGVTVPHPAEYLNVVPRNGHLCMSGYITIQDG--RQSGQDILSTKGPCKPY 1158

Query: 187  LGSYTREKSLGTELASAYGSEPLVRRPIHLQKLIAWRYKEDGCMSRIIKACLRSVTDLPN 366
             GSYT+E+   T++ASAYG E +++R + +QKLI WRY  D    RII A L +V+++  
Sbjct: 1159 FGSYTKERFKATDIASAYGDEDVLKRAVSIQKLIGWRYPSDSTFGRIIAATLLAVSNVDP 1218

Query: 367  EFLISDPRCVTGDAEHRYRDKATKHEGVINNLYYWSTWCRTLTDSFMKHSRGGKNETIQF 546
            E +      + G  +HR    A  H G+ N L   ST     T ++++HSR GKNE I F
Sbjct: 1219 ETVWVREETIRGSYDHRRNTDANTHGGIPNFLNTASTHLSMCTSTWVEHSRSGKNEYIHF 1278

Query: 547  QTCLLYIHALSSMVNDGCHGALHYFSRLK-----TKQIGEVHYHEICDECIVPLIDPGEH 711
            Q+C++                + Y  R       +  I E H HE C  CI  +      
Sbjct: 1279 QSCMI--------------TCVRYMLRYMRGPRISDAITEYHAHECCQTCITEIDPIPPD 1324

Query: 712  ETAPKYFPPIPTCPNNPYLYVKRENMEFTYAELAEISEYEETILTESIEHTYDLRTALSL 891
             TAP      PT P N  +YV+ E+++  Y     I E  ++I    +E    L ++   
Sbjct: 1325 STAPTLPVSFPTLPQNLLVYVESESIKMDYTRRLAI-EDSQSIAPMILEDITVLGSSRDR 1383

Query: 892  LLGCRIGRALTGSRHNEENLTESTIRLMLGKVHFPTLMSGIINYITAWKFMKKMI 1056
            ++ C     +  +   +  +++S + L   KV     +      IT  +++  M+
Sbjct: 1384 IIDCISTILVIEALGRKHGMSKSFMLLAREKVDVDACLLSFRKKITLLRYIDPMM 1438


Top