BLASTX nr result

ID: Chrysanthemum22_contig00025097 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00025097
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87599.1| UBA-like protein [Cynara cardunculus var. scolymus]     55   6e-06

>gb|KVH87599.1| UBA-like protein [Cynara cardunculus var. scolymus]
          Length = 666

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/86 (43%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
 Frame = -1

Query: 434 GMWMSSTNSADLYASG--RGGKTATRPPTXXXXXXXXXXXXXXLYTDXXXXXXXXXXXXX 261
           GMWM    ++D+YA+   RGGK+A RPPT                 +             
Sbjct: 595 GMWMGG-GASDVYAAAAARGGKSAMRPPTGIV-------------ANGGLLHPDGPEASA 640

Query: 260 XXXXXSPFEEKELFSFPRQFVSSPSL 183
                SPFEEKELFSFPRQFVSSPSL
Sbjct: 641 GGEWSSPFEEKELFSFPRQFVSSPSL 666


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