BLASTX nr result

ID: Chrysanthemum22_contig00024823 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024823
         (353 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023752642.1| uncharacterized protein LOC111901007 [Lactuc...    63   3e-09
ref|XP_021978228.1| uncharacterized protein LOC110873587 isoform...    54   9e-06
gb|OTG19377.1| putative nucleic acid-binding, OB-fold protein [H...    54   9e-06

>ref|XP_023752642.1| uncharacterized protein LOC111901007 [Lactuca sativa]
 gb|PLY93926.1| hypothetical protein LSAT_1X127421 [Lactuca sativa]
          Length = 311

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 37/112 (33%), Positives = 60/112 (53%)
 Frame = -3

Query: 336 LQQPVVLAASSCYVKRYAATGALQLASTPATHVYLNPNVPETTHILVV*NELLGTMPLLE 157
           L  PV++A +S  V +Y   G LQL +TPA+++Y+NP +PE   +     E     P+L+
Sbjct: 22  LPSPVIVAITSMKVTQYL--GNLQLTATPASYIYINPTIPEAAAMAAEFVERHNQNPVLK 79

Query: 156 YQPHTETTAESEIPNNKVDLKTLLAINPETHKGVRFTVEATLARIDTTATWY 1
            +       + E   N+  L  LL+ NP  + G +FT +A+L  ID +  W+
Sbjct: 80  IKYQKSKDVQVEKKRNRFPLVDLLSQNP--NAGAQFTCKASLVSIDASKGWF 129


>ref|XP_021978228.1| uncharacterized protein LOC110873587 isoform X2 [Helianthus annuus]
          Length = 453

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 38/109 (34%), Positives = 56/109 (51%)
 Frame = -3

Query: 327 PVVLAASSCYVKRYAATGALQLASTPATHVYLNPNVPETTHILVV*NELLGTMPLLEYQP 148
           P ++A +S  VK+      LQL ST AT+VYLNP      H+  V   LL  M   + +P
Sbjct: 192 PAIVAFTSLQVKKNKY--GLQLQSTNATYVYLNPQ-----HVEAV---LLKEM-WQKQEP 240

Query: 147 HTETTAESEIPNNKVDLKTLLAINPETHKGVRFTVEATLARIDTTATWY 1
           H  T+    +P+N V +  LL + P    G  +T++A +  I+ T  WY
Sbjct: 241 HHPTS--QSVPDNDVPISDLLQLQPTEITGKTYTIKAAVTEIEATKDWY 287


>gb|OTG19377.1| putative nucleic acid-binding, OB-fold protein [Helianthus annuus]
          Length = 477

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 38/109 (34%), Positives = 56/109 (51%)
 Frame = -3

Query: 327 PVVLAASSCYVKRYAATGALQLASTPATHVYLNPNVPETTHILVV*NELLGTMPLLEYQP 148
           P ++A +S  VK+      LQL ST AT+VYLNP      H+  V   LL  M   + +P
Sbjct: 216 PAIVAFTSLQVKKNKY--GLQLQSTNATYVYLNPQ-----HVEAV---LLKEM-WQKQEP 264

Query: 147 HTETTAESEIPNNKVDLKTLLAINPETHKGVRFTVEATLARIDTTATWY 1
           H  T+    +P+N V +  LL + P    G  +T++A +  I+ T  WY
Sbjct: 265 HHPTS--QSVPDNDVPISDLLQLQPTEITGKTYTIKAAVTEIEATKDWY 311


Top