BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024744
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunc...    78   6e-14
ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [He...    58   6e-07
ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [He...    58   6e-07
ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [He...    58   6e-07
ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [He...    58   6e-07

>gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunculus var. scolymus]
          Length = 897

 Score = 78.2 bits (191), Expect = 6e-14
 Identities = 51/126 (40%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
 Frame = +1

Query: 91   PVSLERLSLCTREEEPNNLTHKSSTALEDTMSPSTANQNSTNDSPKRPDVTDEHGSE--- 261
            PVSLE LSL TRE+ PN L     +   +  S ST N  S  +S K+ + T+EHGSE   
Sbjct: 654  PVSLESLSLLTREKGPNVLEDTVPSVNNENPSTSTRNPFSATESAKKQNGTEEHGSESLS 713

Query: 262  -----------TDPPQIPSQNVET-CKTNHMLRASEHVSPEPTADIVTIAQLPNKDYPTV 405
                       TDP Q  SQN ET CKTNHML ASE  S E         + P++ +P +
Sbjct: 714  FSPGHRNLREQTDPQQYSSQNPETCCKTNHMLTASEDASAESDGQPRQHHRQPHQGFPLI 773

Query: 406  PNAAQN 423
              +  N
Sbjct: 774  HESTAN 779


>ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
 ref|XP_022035508.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
          Length = 903

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 100 LERLSLCTREEEPNNLTHKSSTALEDTMSPSTANQN------STNDSPKRPDVTDEHGSE 261
           LE L    R    N+  H S    + T +PS ++QN      S     K  ++  E   E
Sbjct: 612 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 671

Query: 262 TDPPQIPSQNVETCKTNHMLRASEHV 339
           TDP QIPS+N ETC+TN+ML ASEHV
Sbjct: 672 TDPHQIPSRNTETCETNNMLTASEHV 697


>ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [Helianthus annuus]
          Length = 920

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 100 LERLSLCTREEEPNNLTHKSSTALEDTMSPSTANQN------STNDSPKRPDVTDEHGSE 261
           LE L    R    N+  H S    + T +PS ++QN      S     K  ++  E   E
Sbjct: 629 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 688

Query: 262 TDPPQIPSQNVETCKTNHMLRASEHV 339
           TDP QIPS+N ETC+TN+ML ASEHV
Sbjct: 689 TDPHQIPSRNTETCETNNMLTASEHV 714


>ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [Helianthus annuus]
 gb|OTG29091.1| putative tetratricopeptide-like helical domain-containing protein
           [Helianthus annuus]
          Length = 925

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 100 LERLSLCTREEEPNNLTHKSSTALEDTMSPSTANQN------STNDSPKRPDVTDEHGSE 261
           LE L    R    N+  H S    + T +PS ++QN      S     K  ++  E   E
Sbjct: 634 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 693

Query: 262 TDPPQIPSQNVETCKTNHMLRASEHV 339
           TDP QIPS+N ETC+TN+ML ASEHV
Sbjct: 694 TDPHQIPSRNTETCETNNMLTASEHV 719


>ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [Helianthus annuus]
          Length = 926

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 100 LERLSLCTREEEPNNLTHKSSTALEDTMSPSTANQN------STNDSPKRPDVTDEHGSE 261
           LE L    R    N+  H S    + T +PS ++QN      S     K  ++  E   E
Sbjct: 635 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 694

Query: 262 TDPPQIPSQNVETCKTNHMLRASEHV 339
           TDP QIPS+N ETC+TN+ML ASEHV
Sbjct: 695 TDPHQIPSRNTETCETNNMLTASEHV 720