BLASTX nr result

ID: Chrysanthemum22_contig00024509 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024509
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08727.1| Nucleotide-binding, alpha-beta plait [Cynara card...    61   1e-07
ref|XP_015066737.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   4e-07
ref|XP_006340003.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   4e-07
ref|XP_004253238.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   4e-07
gb|KMZ62229.1| putative Heterogeneous nuclear ribonucleoprotein ...    59   4e-07
ref|XP_016558639.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   5e-07
gb|PKI57013.1| hypothetical protein CRG98_022517, partial [Punic...    55   7e-07
gb|PIN17226.1| putative RNA-binding protein (RRM superfamily) [H...    58   1e-06
ref|XP_019182543.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
ref|XP_019253131.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
ref|XP_015071278.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
ref|XP_009773234.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
ref|XP_009597875.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
ref|XP_006343330.1| PREDICTED: heterogeneous nuclear ribonucleop...    58   1e-06
gb|PLY86402.1| hypothetical protein LSAT_2X73381 [Lactuca sativa]      58   2e-06
ref|XP_002521718.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   2e-06
ref|XP_022855035.1| heterogeneous nuclear ribonucleoprotein F-li...    57   3e-06
gb|PIA56846.1| hypothetical protein AQUCO_00700892v1 [Aquilegia ...    57   3e-06
ref|XP_021848693.1| heterogeneous nuclear ribonucleoprotein F is...    57   3e-06
ref|XP_010679957.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   3e-06

>gb|KVI08727.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 265

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AMYGSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMYGSGGLSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_015066737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Solanum
           pennellii]
          Length = 264

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG+SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGFSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_006340003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Solanum
           tuberosum]
          Length = 264

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG+SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGFSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_004253238.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like [Solanum
           lycopersicum]
          Length = 264

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG+SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGFSDGYEIGSKRPRMMESNPYFA 35


>gb|KMZ62229.1| putative Heterogeneous nuclear ribonucleoprotein [Zostera marina]
          Length = 277

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  A+ GSGGYSDGYE+GSKRPRM ESNPYFA
Sbjct: 2   YGSRGALLGSGGYSDGYEVGSKRPRMMESNPYFA 35


>ref|XP_016558639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like isoform
           X1 [Capsicum annuum]
          Length = 303

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG+SDGYEIGSKRPRM ESNPYFA
Sbjct: 40  YGSRGAMLGSGGFSDGYEIGSKRPRMMESNPYFA 73


>gb|PKI57013.1| hypothetical protein CRG98_022517, partial [Punica granatum]
          Length = 62

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 110 FGYNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           +GY    AM GSGG SDGYE+GSKR RM ESNPYFA
Sbjct: 2   YGYRG--AMLGSGGVSDGYEVGSKRQRMMESNPYFA 35


>gb|PIN17226.1| putative RNA-binding protein (RRM superfamily) [Handroanthus
           impetiginosus]
          Length = 265

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  A++GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGHRGALFGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_019182543.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Ipomoea nil]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_019253131.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 [Nicotiana
           attenuata]
 gb|OIS98339.1| hypothetical protein A4A49_22649 [Nicotiana attenuata]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_015071278.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Solanum pennellii]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_009773234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Nicotiana sylvestris]
 ref|XP_016479269.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like isoform
           X1 [Nicotiana tabacum]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_009597875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Nicotiana tomentosiformis]
 ref|XP_016457339.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2-like isoform
           X1 [Nicotiana tabacum]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>ref|XP_006343330.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Solanum tuberosum]
          Length = 265

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYEIGSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEIGSKRPRMMESNPYFA 35


>gb|PLY86402.1| hypothetical protein LSAT_2X73381 [Lactuca sativa]
          Length = 437

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 92  RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           RAMYGSGG SD YEIGSKRPR+ ESNPYFA
Sbjct: 152 RAMYGSGGLSDAYEIGSKRPRIMESNPYFA 181


>ref|XP_002521718.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Ricinus communis]
 gb|EEF40705.1| heterogeneous nuclear ribonucleoprotein, putative [Ricinus
           communis]
          Length = 264

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -2

Query: 104 YNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y +  AM GSGG SDGYE+GSKRPRM ESNPYFA
Sbjct: 2   YGSRGAMLGSGGVSDGYEVGSKRPRMMESNPYFA 35


>ref|XP_022855035.1| heterogeneous nuclear ribonucleoprotein F-like [Olea europaea var.
           sylvestris]
          Length = 264

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -2

Query: 110 FGYNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           FG+    AM+GSGG SDGYEIGSKRPRM ES+PYFA
Sbjct: 2   FGHRG--AMFGSGGVSDGYEIGSKRPRMMESSPYFA 35


>gb|PIA56846.1| hypothetical protein AQUCO_00700892v1 [Aquilegia coerulea]
          Length = 264

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = -2

Query: 92 RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
          RAM GSGG+SDGYE+GSKR RM ESNPYFA
Sbjct: 5  RAMLGSGGFSDGYEVGSKRQRMIESNPYFA 34


>ref|XP_021848693.1| heterogeneous nuclear ribonucleoprotein F isoform X1 [Spinacia
           oleracea]
 gb|KNA11256.1| hypothetical protein SOVF_136900 isoform A [Spinacia oleracea]
          Length = 275

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -2

Query: 140 Y*QG*VGTFFFGYNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           Y  G   ++  GY +  AM GSGG SDGYE+GSKR RM ESNPYFA
Sbjct: 2   YGSGYGSSYGSGYGSRGAMLGSGGVSDGYEVGSKRQRMMESNPYFA 47


>ref|XP_010679957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1
           [Beta vulgaris subsp. vulgaris]
          Length = 275

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -2

Query: 107 GYNN*RAMYGSGGYSDGYEIGSKRPRMTESNPYFA 3
           GY++  AM GSGG SDGYE+GSKR RM ESNPYFA
Sbjct: 13  GYSSRGAMLGSGGVSDGYEVGSKRQRMMESNPYFA 47


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