BLASTX nr result

ID: Chrysanthemum22_contig00024269 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024269
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023753690.1| 3-oxoacyl-[acyl-carrier-protein] synthase 3 ...    60   1e-07
ref|XP_016709808.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...    55   5e-06
ref|XP_016709807.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...    55   5e-06
ref|XP_017619489.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...    55   8e-06
gb|PPS01808.1| hypothetical protein GOBAR_AA18850 [Gossypium bar...    55   8e-06

>ref|XP_023753690.1| 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic-like
           [Lactuca sativa]
 gb|PLY93166.1| hypothetical protein LSAT_6X1880 [Lactuca sativa]
          Length = 395

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = +3

Query: 318 MMNSCGFYAPSMKISSSSIGVNRIGF---DLFVKKIRCSSEVHGGVDRVSSTKSHVQRLV 488
           M N+ GF+ P+M+ISSS I +NR GF   D+  K+IRCSS   G V+  S  +S   RLV
Sbjct: 1   MANASGFFTPTMRISSS-INLNRSGFRCPDVISKRIRCSSTSQG-VESFSPPESRSPRLV 58

Query: 489 GKGCKLVG 512
            KGCKLVG
Sbjct: 59  SKGCKLVG 66


>ref|XP_016709808.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase III,
           chloroplastic-like isoform X2 [Gossypium hirsutum]
          Length = 237

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 318 MMNSCGFYAPSMKIS-SSSIGVNRIGFDL---FVKKIRCSSEVHGGVDRVSSTKSHVQRL 485
           M  + GF+ PS++     SIGV+R GF L     K++ CSS +      VSS++S + +L
Sbjct: 1   MAKASGFFTPSLRTKIQPSIGVSRSGFCLSEGIFKRVVCSSSIESAGTHVSSSQSRIPKL 60

Query: 486 VGKGCKLVG 512
           V KGCKLVG
Sbjct: 61  VNKGCKLVG 69


>ref|XP_016709807.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase III,
           chloroplastic-like isoform X1 [Gossypium hirsutum]
          Length = 258

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 318 MMNSCGFYAPSMKIS-SSSIGVNRIGFDL---FVKKIRCSSEVHGGVDRVSSTKSHVQRL 485
           M  + GF+ PS++     SIGV+R GF L     K++ CSS +      VSS++S + +L
Sbjct: 1   MAKASGFFTPSLRTKIQPSIGVSRSGFCLSEGIFKRVVCSSSIESAGTHVSSSQSRIPKL 60

Query: 486 VGKGCKLVG 512
           V KGCKLVG
Sbjct: 61  VNKGCKLVG 69


>ref|XP_017619489.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase III,
           chloroplastic-like [Gossypium arboreum]
          Length = 391

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 318 MMNSCGFYAPSMKIS-SSSIGVNRIGFDL---FVKKIRCSSEVHGGVDRVSSTKSHVQRL 485
           M  + GF+ PS++     SIGV+R GF L     K++ CSS +      VSS++S + +L
Sbjct: 1   MAKASGFFTPSLRTKIQPSIGVSRSGFCLSEGIFKRVVCSSSIESAGTHVSSSQSRIPKL 60

Query: 486 VGKGCKLVG 512
           V KGCKLVG
Sbjct: 61  VNKGCKLVG 69


>gb|PPS01808.1| hypothetical protein GOBAR_AA18850 [Gossypium barbadense]
          Length = 396

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = +3

Query: 318 MMNSCGFYAPSMKIS-SSSIGVNRIGFDL---FVKKIRCSSEVHGGVDRVSSTKSHVQRL 485
           M  + GF+ PS++     SIGV+R GF L     K++ CSS +      VSS++S + +L
Sbjct: 1   MAKASGFFTPSLRTKIQPSIGVSRSGFCLSEGIFKRVVCSSSIESAGTHVSSSQSRIPKL 60

Query: 486 VGKGCKLVG 512
           V KGCKLVG
Sbjct: 61  VNKGCKLVG 69


Top