BLASTX nr result

ID: Chrysanthemum22_contig00024239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024239
         (455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09338.1| Zinc finger, GATA-type, partial [Cynara carduncul...    80   5e-15
ref|XP_023751543.1| GATA transcription factor 11-like [Lactuca s...    74   4e-13
ref|XP_021973226.1| GATA transcription factor 11-like isoform X1...    71   1e-11
ref|XP_021973227.1| GATA transcription factor 11-like isoform X2...    65   1e-09
ref|XP_022005823.1| GATA transcription factor 11-like [Helianthu...    60   1e-07
gb|KVI00188.1| hypothetical protein Ccrd_021561 [Cynara carduncu...    60   1e-07

>gb|KVI09338.1| Zinc finger, GATA-type, partial [Cynara cardunculus var. scolymus]
          Length = 301

 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 38/49 (77%), Positives = 42/49 (85%), Gaps = 3/49 (6%)
 Frame = -1

Query: 143 QDMRMCKTEP---GVTVDYNHRVYDEDCFGDIDILNLFDFPMESLEGDG 6
           QD RMCK+E    GVT+DYNHRVYDEDCFG  DILN+FDFPMES+EGDG
Sbjct: 10  QDKRMCKSESAFSGVTIDYNHRVYDEDCFG--DILNMFDFPMESVEGDG 56


>ref|XP_023751543.1| GATA transcription factor 11-like [Lactuca sativa]
 gb|PLY94772.1| hypothetical protein LSAT_2X100261 [Lactuca sativa]
          Length = 259

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 39/53 (73%), Positives = 41/53 (77%), Gaps = 7/53 (13%)
 Frame = -1

Query: 143 QDMRMCKTEP---GVTVDYN----HRVYDEDCFGDIDILNLFDFPMESLEGDG 6
           QD RMCKTE    GV+VDYN    HRVYDEDCFGDI  LN+FDFPME LEGDG
Sbjct: 10  QDKRMCKTESAFSGVSVDYNQNQNHRVYDEDCFGDI--LNMFDFPMEGLEGDG 60


>ref|XP_021973226.1| GATA transcription factor 11-like isoform X1 [Helianthus annuus]
 gb|OTG20685.1| putative zinc finger, NHR/GATA-type [Helianthus annuus]
          Length = 291

 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 38/61 (62%), Positives = 42/61 (68%), Gaps = 14/61 (22%)
 Frame = -1

Query: 143 QDMRMCKTEPGVT----VDYN----------HRVYDEDCFGDIDILNLFDFPMESLEGDG 6
           QD RMCKTE G++    VDYN          HRVYDEDCFGDI  LN+FD PMESL+GDG
Sbjct: 4   QDKRMCKTESGISAVTIVDYNNNNNNNNNNDHRVYDEDCFGDI--LNMFDLPMESLDGDG 61

Query: 5   L 3
           L
Sbjct: 62  L 62


>ref|XP_021973227.1| GATA transcription factor 11-like isoform X2 [Helianthus annuus]
          Length = 284

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 35/57 (61%), Positives = 39/57 (68%), Gaps = 14/57 (24%)
 Frame = -1

Query: 131 MCKTEPGVT----VDYN----------HRVYDEDCFGDIDILNLFDFPMESLEGDGL 3
           MCKTE G++    VDYN          HRVYDEDCFGDI  LN+FD PMESL+GDGL
Sbjct: 1   MCKTESGISAVTIVDYNNNNNNNNNNDHRVYDEDCFGDI--LNMFDLPMESLDGDGL 55


>ref|XP_022005823.1| GATA transcription factor 11-like [Helianthus annuus]
 gb|OTF99082.1| putative GATA transcription factor 10 [Helianthus annuus]
          Length = 299

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 34/49 (69%), Positives = 35/49 (71%), Gaps = 3/49 (6%)
 Frame = -1

Query: 143 QDMRMCKTEP--GVTVDYN-HRVYDEDCFGDIDILNLFDFPMESLEGDG 6
           QD RMC TE   G TVD N HRVYDED     DILN+ DFPMESLEGDG
Sbjct: 4   QDKRMCNTESVFGATVDCNAHRVYDEDFS---DILNMLDFPMESLEGDG 49


>gb|KVI00188.1| hypothetical protein Ccrd_021561 [Cynara cardunculus var. scolymus]
          Length = 299

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -1

Query: 143 QDMRMCKTEPGVTVDYNHRVYDEDCFGDIDILNLFDFPMESLEGDGL 3
           QD  MC    GV +DYNH VYDEDCFG  DILN+ D P+E+LEGDGL
Sbjct: 4   QDNGMC----GV-IDYNHEVYDEDCFG--DILNILDLPVENLEGDGL 43


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