BLASTX nr result

ID: Chrysanthemum22_contig00024136 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024136
         (564 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY71602.1| hypothetical protein LSAT_2X45481 [Lactuca sativa]      62   2e-09
gb|PLY71626.1| hypothetical protein LSAT_9X87941 [Lactuca sativa]      56   4e-06

>gb|PLY71602.1| hypothetical protein LSAT_2X45481 [Lactuca sativa]
          Length = 80

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 40/80 (50%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = -1

Query: 417 MAGVTSKKXXXXXXXXXXXXXXVQALETSHLTPLRRFLKHSSLDKXXXXXXXXXXTS--H 244
           MA V  KK              V  LETS LT  RR LKHS   K           +  H
Sbjct: 1   MADVIKKKLLLFFGLLLVVPLVVYPLETSCLTSGRRLLKHSQPPKTTMATTIATTGATTH 60

Query: 243 AEFHAAAHEVPSGPNPESNR 184
           AEFHAAAHEVPSGPNPESNR
Sbjct: 61  AEFHAAAHEVPSGPNPESNR 80


>gb|PLY71626.1| hypothetical protein LSAT_9X87941 [Lactuca sativa]
          Length = 270

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/81 (45%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = -1

Query: 420 FMAGVTSKKXXXXXXXXXXXXXXVQALETSHLTPLRRFLKHSSLDKXXXXXXXXXXTS-- 247
           FMA V SKK              V  LET  L   RR LKHS   K           +  
Sbjct: 190 FMADVISKKLLLFFGLLLVVPLIVYPLETDCLISERRLLKHSQPPKTTMATTIATTGATT 249

Query: 246 HAEFHAAAHEVPSGPNPESNR 184
           H EF  AAHEVPSGPNPESNR
Sbjct: 250 HVEFRVAAHEVPSGPNPESNR 270


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