BLASTX nr result

ID: Chrysanthemum22_contig00024050 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00024050
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY90301.1| hypothetical protein LSAT_2X119500 [Lactuca sativa]     96   8e-22
gb|KVI09791.1| Heavy metal-associated domain, HMA [Cynara cardun...    57   8e-07
gb|PLY90321.1| hypothetical protein LSAT_2X119560 [Lactuca sativa]     55   1e-06
gb|KVI09796.1| Heavy metal-associated domain, HMA, partial [Cyna...    56   3e-06

>gb|PLY90301.1| hypothetical protein LSAT_2X119500 [Lactuca sativa]
          Length = 208

 Score = 95.9 bits (237), Expect = 8e-22
 Identities = 64/142 (45%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
 Frame = +2

Query: 2   ALRKSGGVTLVEFDRETGKAIVSST--RNPEEIRHDLERKMKKPVVIVPQEAIIPINQKP 175
           ALR+  G+ LV   RE+G   V S    +PE IR+ LER+MKK VVIV       INQ P
Sbjct: 25  ALRRFHGLQLVNLGRESGIVTVVSIAEHHPEVIRYALERQMKKSVVIVS------INQNP 78

Query: 176 PNSVVSSIIPTQPTFNIQDLGD-VVRLSEGLDSVEITHTSTMRITFNRRTNPPYATPQPR 352
            +S VS+ +P+Q TF++Q LG+ ++ + + LD VEIT + T+R+ F  R NPP    +PR
Sbjct: 79  -SSTVSATVPSQRTFDLQGLGEAMLGMFQVLDGVEITRSDTLRVNFIHRENPPVVRVEPR 137

Query: 353 RNNGFYME-DVGSASPRHLPRA 415
           RN   Y + DV  A  R  PRA
Sbjct: 138 RNISSYGDVDVEHAPRRPTPRA 159


>gb|KVI09791.1| Heavy metal-associated domain, HMA [Cynara cardunculus var.
           scolymus]
          Length = 226

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = +2

Query: 5   LRKSGGVTLVEFDRETGKAIVSSTRNPEEIRHDLERKMKKPVVIVPQEAIIPINQKPPNS 184
           LR+ GGV L+  D +TGK  +S+ ++P+ I+  L++K KK V I+PQE    IN+     
Sbjct: 52  LREVGGVELLSMDLDTGKLTISTAKHPQVIQFALQKKFKKVVDILPQE----INRLFGFD 107

Query: 185 VVSSIIPTQPTFNIQDLGDV---VRLSEGLDSVEITHTSTMRITFNRRTNPPYATP 343
                       N+QD+ +    V  ++GL+SVE   ++T++  FN+ ++     P
Sbjct: 108 T-----------NVQDMAEALVKVSHAKGLESVEYRQSNTLKFNFNQPSSSSSRLP 152


>gb|PLY90321.1| hypothetical protein LSAT_2X119560 [Lactuca sativa]
          Length = 187

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
 Frame = +2

Query: 17  GGVTLVEFDRETGKAIVSSTRNPEEIRHDLERKMKKPVVIV---PQEAIIPINQKPPNSV 187
           GGV L+E + E GK I+S+T++ + I++ LER   K  VI+   P+    P      N +
Sbjct: 32  GGVKLLEMNPEIGKFIISTTKHSDVIKYALERTFSKKKVILFENPKHPCQPPIHNHQNVI 91

Query: 188 VS----SIIPTQPTFNIQDLGDVVRL---SEGLDSVEITHTSTMRITFNRRTNPPYATPQ 346
           ++      +P   T N  D+  V+     ++GL SVEITH   M++ FN   N P    +
Sbjct: 92  INHNHIHQVPPSITTNAYDVAKVLATTTHAKGLQSVEITH---MKLNFNNFENRPSVRSR 148

Query: 347 PRRNN 361
              NN
Sbjct: 149 HAINN 153


>gb|KVI09796.1| Heavy metal-associated domain, HMA, partial [Cynara cardunculus
           var. scolymus]
          Length = 332

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
 Frame = +2

Query: 20  GVTLVEFDRETGKAIVSSTRNPEEIRHDLERKMKKPVVIVPQ--EAIIPINQ--KPPNSV 187
           GV L++ D E GK  + +TR+PEEIR  L+RK     VI+ +  + + P++    P NS 
Sbjct: 77  GVKLLDVDSENGKFTIQTTRHPEEIRDALQRKFSGKSVILSKRIDHLDPLSTLINPRNSS 136

Query: 188 VSSIIPTQPTFNIQDLGD---VVRLSEGLDSVEITHTSTMRITFNRR-------TN-PPY 334
           +      +   N+ DL +    V  + GL +VEIT ++T+  TF  +       TN PP 
Sbjct: 137 I------EGPLNLHDLAEALVTVCHANGLQTVEITQSNTINFTFGNQLTTSASATNVPPP 190

Query: 335 ATPQP 349
           A P P
Sbjct: 191 APPPP 195


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