BLASTX nr result

ID: Chrysanthemum22_contig00023928 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00023928
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus]     62   4e-08
gb|OTF88012.1| putative zinc finger, CCHC-type [Helianthus annuus]     57   2e-06
gb|OTG24635.1| putative ribonuclease H-like domain-containing pr...    57   2e-06

>gb|OTG14868.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1386

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 45/160 (28%), Positives = 61/160 (38%), Gaps = 10/160 (6%)
 Frame = -1

Query: 461  YKGYKCLDPNTHRVFITRHARFDETFFPFARXXXXXXXXXXXLHSYSDELPNLP-SDPVE 285
            YKGY+CLDP + RV+ITRHARF+E  FPF             L S+ ++    P +   +
Sbjct: 694  YKGYRCLDPTSSRVYITRHARFNENIFPFHGTTDNQPFSTLPLTSFDEDTFFTPHTHCPK 753

Query: 284  PLSTKSSTSSQTHVPCSSCLH---------ENXXXXXXXXXXXXXXXXXXXXXXXXXXXP 132
            P  T + T + T  PC  C+          E                             
Sbjct: 754  PTPTPTPTPNLTKTPCHLCMDFPPPPQPIPETTPSSPPPSPNNSTTPNSPLSPHTSTSPT 813

Query: 131  DTQNXXXXXXXXXXXXXXPVHPMTIRSKSGIVTPRHILDL 12
               +              P HPM  R+K+G+  PRHI DL
Sbjct: 814  TDISSPIPTPPPPPPPPLPTHPMITRAKAGVFRPRHIADL 853


>gb|OTF88012.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1400

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
 Frame = -1

Query: 461 YKGYKCLDPNTHRVFITRHARFDETFFPFARXXXXXXXXXXXLHSYSDELPNLP------ 300
           YK Y+CLDP +++V+ITRHA+FDE  +PF+              ++ + LP++P      
Sbjct: 698 YKAYRCLDPRSNKVYITRHAQFDEDAYPFSGSIKPVDEATLVFSNFDETLPSIPLPNQPP 757

Query: 299 ---SDPVEPLSTKSSTSSQTHVPCSSC 228
                P+ P+   ++TS     PC  C
Sbjct: 758 IIHHSPLAPVQ-PTATSQPNSDPCPLC 783


>gb|OTG24635.1| putative ribonuclease H-like domain-containing protein [Helianthus
           annuus]
          Length = 421

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 12/90 (13%)
 Frame = -1

Query: 461 YKGYKCLDPNTHRVFITRHARFDETFFPFARXXXXXXXXXXXLHSYSDELPN--LPSDPV 288
           YKGY+CLDP+T R++ TRHA+FDE  FPF               ++ + LP    P+ P 
Sbjct: 111 YKGYRCLDPSTQRIYTTRHAQFDEDNFPFGAHVSPVDQATLIFSNFDETLPTNPFPNPPF 170

Query: 287 EPLSTKSST----------SSQTHVPCSSC 228
            P  +   T              H PC  C
Sbjct: 171 LPTPSGHHTPIRPNPINPLPKPDHSPCPMC 200


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