BLASTX nr result

ID: Chrysanthemum22_contig00023902 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00023902
         (613 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08237.1| Zinc finger, CCHC-type, partial [Cynara carduncul...    74   5e-12
ref|XP_022037452.1| protein AIR1-like isoform X2 [Helianthus ann...    71   9e-11
ref|XP_022037451.1| protein AIR1-like isoform X1 [Helianthus ann...    71   9e-11
gb|KVH91466.1| Zinc finger, CCHC-type [Cynara cardunculus var. s...    64   2e-08

>gb|KVI08237.1| Zinc finger, CCHC-type, partial [Cynara cardunculus var. scolymus]
          Length = 444

 Score = 74.3 bits (181), Expect = 5e-12
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +3

Query: 12  GFHSNGRQFQYGSPLAGSNGYQQRFSASRFGNSSSYGKREYGWDY 146
           GF SNGR+ QY S + GSNGYQ RFSAS+F NSSSYGKREYGWDY
Sbjct: 401 GFRSNGRKLQYESTV-GSNGYQHRFSASKFVNSSSYGKREYGWDY 444


>ref|XP_022037452.1| protein AIR1-like isoform X2 [Helianthus annuus]
          Length = 460

 Score = 70.9 bits (172), Expect = 9e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = +3

Query: 3   SDLGFHSNGRQFQYGSPLAGSNGYQQRFSASRFGNSSSYGK-REYGWDY 146
           ++ G+HSN  ++ Y SP+  SNGYQQRFSASRFGNS++YGK REYGWDY
Sbjct: 413 NNTGYHSNQGRYHYDSPVV-SNGYQQRFSASRFGNSTNYGKQREYGWDY 460


>ref|XP_022037451.1| protein AIR1-like isoform X1 [Helianthus annuus]
 gb|OTG24464.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 461

 Score = 70.9 bits (172), Expect = 9e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
 Frame = +3

Query: 3   SDLGFHSNGRQFQYGSPLAGSNGYQQRFSASRFGNSSSYGK-REYGWDY 146
           ++ G+HSN  ++ Y SP+  SNGYQQRFSASRFGNS++YGK REYGWDY
Sbjct: 414 NNTGYHSNQGRYHYDSPVV-SNGYQQRFSASRFGNSTNYGKQREYGWDY 461


>gb|KVH91466.1| Zinc finger, CCHC-type [Cynara cardunculus var. scolymus]
          Length = 450

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = +3

Query: 3   SDLGFHSNGRQFQYGSPLAGSNGYQQRFSASRFGNSSSYGKREYGWDY 146
           S++G       FQY +  +GSNGY+ RFSASRFGNSS+YG+REYGWDY
Sbjct: 405 SNVGASGYDSGFQYEA--SGSNGYRHRFSASRFGNSSNYGRREYGWDY 450


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