BLASTX nr result

ID: Chrysanthemum22_contig00023697 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00023697
         (1215 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU35316.1| cell wall invertase, partial [Cichorium intybus]        58   1e-05

>gb|AFU35316.1| cell wall invertase, partial [Cichorium intybus]
          Length = 260

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = +1

Query: 601 KVRHVLKVGLFDYGRDYYMIGNYSPPKEKF 690
           +V+HVLKVGLFDY RDYYMIGNYSP KE +
Sbjct: 206 RVKHVLKVGLFDYARDYYMIGNYSPSKENY 235


Top