BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00023683
         (930 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010070311.1| PREDICTED: exosome complex component RRP4 ho...    62   2e-08
ref|XP_023738446.1| exosome complex component RRP4 homolog isofo...    65   3e-08
ref|XP_010070309.1| PREDICTED: exosome complex component RRP4 ho...    62   4e-08
gb|PLY70202.1| hypothetical protein LSAT_9X1881 [Lactuca sativa]       64   7e-08
ref|XP_023740651.1| exosome complex component RRP4 homolog [Lact...    64   8e-08
ref|XP_023738447.1| exosome complex component RRP4 homolog isofo...    64   8e-08
gb|KVH94430.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...    64   8e-08
gb|PLY68546.1| hypothetical protein LSAT_2X2860 [Lactuca sativa]       62   1e-07
ref|XP_023740653.1| exosome complex component RRP4 homolog [Lact...    62   2e-07
ref|XP_010070263.1| PREDICTED: exosome complex component RRP4 ho...    62   5e-07
ref|XP_022010658.1| exosome complex component RRP4 homolog [Heli...    62   5e-07
gb|OVA20105.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 ...    62   5e-07
ref|XP_017252169.1| PREDICTED: exosome complex component RRP4 ho...    60   1e-06
dbj|GAV80469.1| hypothetical protein CFOL_v3_23930 [Cephalotus f...    60   1e-06
ref|XP_008780046.2| PREDICTED: exosome complex component RRP4 ho...    57   2e-06
gb|OWM77927.1| hypothetical protein CDL15_Pgr018496 [Punica gran...    60   2e-06
gb|PNX77381.1| exosome complex component rrp4-like protein, part...    57   2e-06
gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]            59   3e-06
ref|XP_018482767.1| PREDICTED: exosome complex component RRP4 ho...    59   4e-06
ref|XP_010247912.1| PREDICTED: exosome complex component RRP4 ho...    59   4e-06

>ref|XP_010070311.1| PREDICTED: exosome complex component RRP4 homolog isoform X2
           [Eucalyptus grandis]
          Length = 106

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+ GE V TVCGV+ERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELNGEVVATVCGVVERVNKLVYVRTLRA 85


>ref|XP_023738446.1| exosome complex component RRP4 homolog isoform X1 [Lactuca sativa]
          Length = 332

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 31/34 (91%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           RGHGTTE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 59  RGHGTTELEGEVVATVCGVIERVNKLVYVRTLRA 92


>ref|XP_010070309.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
           [Eucalyptus grandis]
 ref|XP_010070310.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
           [Eucalyptus grandis]
 ref|XP_018716785.1| PREDICTED: exosome complex component RRP4 homolog isoform X1
           [Eucalyptus grandis]
          Length = 134

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+ GE V TVCGV+ERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELNGEVVATVCGVVERVNKLVYVRTLRA 85


>gb|PLY70202.1| hypothetical protein LSAT_9X1881 [Lactuca sativa]
          Length = 314

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELEGEVVATVCGVIERVNKLVYVRTLRA 85


>ref|XP_023740651.1| exosome complex component RRP4 homolog [Lactuca sativa]
          Length = 325

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELEGEVVATVCGVIERVNKLVYVRTLRA 85


>ref|XP_023738447.1| exosome complex component RRP4 homolog isoform X2 [Lactuca sativa]
          Length = 325

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELEGEVVATVCGVIERVNKLVYVRTLRA 85


>gb|KVH94430.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cynara
           cardunculus var. scolymus]
          Length = 325

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 30/34 (88%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELEGEVVATVCGVIERVNKLVYVRTLRA 85


>gb|PLY68546.1| hypothetical protein LSAT_2X2860 [Lactuca sativa]
          Length = 182

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHG TE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGMTELEGEVVTTVCGVIERVNKLVYVRTLRA 85


>ref|XP_023740653.1| exosome complex component RRP4 homolog [Lactuca sativa]
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHG TE+EGE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGMTELEGEVVTTVCGVIERVNKLVYVRTLRA 85


>ref|XP_010070263.1| PREDICTED: exosome complex component RRP4 homolog [Eucalyptus
           grandis]
 ref|XP_018715512.1| PREDICTED: exosome complex component RRP4 homolog [Eucalyptus
           grandis]
 gb|KCW58918.1| hypothetical protein EUGRSUZ_H01542 [Eucalyptus grandis]
          Length = 327

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+ GE V TVCGV+ERVNKLVYVRTLRA
Sbjct: 52  KGHGTTELNGEVVATVCGVVERVNKLVYVRTLRA 85


>ref|XP_022010658.1| exosome complex component RRP4 homolog [Helianthus annuus]
 gb|OTF93929.1| putative ribosomal RNA processing 4 [Helianthus annuus]
          Length = 330

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTT+++GE V TVCGVIERVNKLVYVRTLRA
Sbjct: 52  KGHGTTDLDGEVVATVCGVIERVNKLVYVRTLRA 85


>gb|OVA20105.1| Exosome complex RNA-binding protein 1/RRP40/RRP4 [Macleaya cordata]
          Length = 335

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT+EIEGE V T+CGV+ERVNKLVYVRTLRA
Sbjct: 57  KGHGTSEIEGEVVATLCGVVERVNKLVYVRTLRA 90


>ref|XP_017252169.1| PREDICTED: exosome complex component RRP4 homolog [Daucus carota
           subsp. sativus]
          Length = 321

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTT+ +GE V TVCGV+ERVNKLVYVRTLRA
Sbjct: 53  KGHGTTDFDGELVATVCGVVERVNKLVYVRTLRA 86


>dbj|GAV80469.1| hypothetical protein CFOL_v3_23930 [Cephalotus follicularis]
          Length = 324

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT+E+ GE V TVCGV+ERVNKLVYVRTLRA
Sbjct: 52  KGHGTSELNGEVVATVCGVVERVNKLVYVRTLRA 85


>ref|XP_008780046.2| PREDICTED: exosome complex component RRP4 homolog, partial [Phoenix
           dactylifera]
          Length = 119

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT+E++G+ V T+CGV+ERVNKLVYVR LRA
Sbjct: 40  KGHGTSELDGQVVATLCGVVERVNKLVYVRALRA 73


>gb|OWM77927.1| hypothetical protein CDL15_Pgr018496 [Punica granatum]
          Length = 329

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT+E+ GE + TVCGV+ERVNKLVYVRTLRA
Sbjct: 55  KGHGTSELNGEVIATVCGVVERVNKLVYVRTLRA 88


>gb|PNX77381.1| exosome complex component rrp4-like protein, partial [Trifolium
           pratense]
          Length = 131

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/34 (73%), Positives = 30/34 (88%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT  +EGE V T+CGV+ERVNKLVYVRTLR+
Sbjct: 52  KGHGTAVLEGEVVATLCGVVERVNKLVYVRTLRS 85


>gb|EOX92344.1| Ribosomal RNA processing 4 [Theobroma cacao]
          Length = 319

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGTTE+ GE V TVCGV+ERVNKLVYVR LRA
Sbjct: 52  KGHGTTELNGELVATVCGVVERVNKLVYVRALRA 85


>ref|XP_018482767.1| PREDICTED: exosome complex component RRP4 homolog [Raphanus
           sativus]
          Length = 321

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT+E+EGE + TVCGV+ERV+KLVYVRTLRA
Sbjct: 53  KGHGTSEVEGELLATVCGVVERVDKLVYVRTLRA 86


>ref|XP_010247912.1| PREDICTED: exosome complex component RRP4 homolog [Nelumbo
           nucifera]
          Length = 323

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   RGHGTTEIEGEDVETVCGVIERVNKLVYVRTLRA 102
           +GHGT E++GE V T+CGV+ERVNKLVYVRTLRA
Sbjct: 47  KGHGTIELDGEVVATLCGVVERVNKLVYVRTLRA 80