BLASTX nr result

ID: Chrysanthemum22_contig00023557 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00023557
         (352 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI01419.1| JmjC domain-containing protein [Cynara cardunculu...    64   2e-10
ref|XP_023765494.1| uncharacterized protein LOC111913991 [Lactuc...    64   2e-09
ref|XP_021981326.1| uncharacterized protein LOC110877482 [Helian...    58   3e-08

>gb|KVI01419.1| JmjC domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 591

 Score = 63.9 bits (154), Expect(2) = 2e-10
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 203 WEGFFHVALHHWGQNYKFSNDIPYESSSWDLHDVAVKLMHIAVNI 69
           WEGF HVALHHWG+NY  +N I  ESS  D+ DVAV LMHIA+ +
Sbjct: 402 WEGFVHVALHHWGRNYNLANRISCESSR-DIDDVAVHLMHIAIKL 445



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
 Frame = -1

Query: 79  QSTFSPLLNR---DCNFNDVIFNVEMAI 5
           QSTF+ LL+R   + +FNDV+ NVE AI
Sbjct: 477 QSTFNHLLSRINANNSFNDVVSNVEAAI 504


>ref|XP_023765494.1| uncharacterized protein LOC111913991 [Lactuca sativa]
 gb|PLY84210.1| hypothetical protein LSAT_7X54021 [Lactuca sativa]
          Length = 779

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -3

Query: 203 WEGFFHVALHHWGQNYKFSNDIPYESSSWDLHDVAVKLMHIAV 75
           WEGF HVALHHW QNYK SN   ++ SS +L DVA+ LMHIA+
Sbjct: 587 WEGFIHVALHHWCQNYKISNHKSFKHSSLNLDDVAMHLMHIAI 629


>ref|XP_021981326.1| uncharacterized protein LOC110877482 [Helianthus annuus]
 gb|OTG13995.1| putative jmjC domain, Armadillo-type fold protein [Helianthus
           annuus]
          Length = 780

 Score = 58.2 bits (139), Expect(2) = 3e-08
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -3

Query: 203 WEGFFHVALHHWGQNYKFSNDIPYESSSWDLHDVAVKLMHIAVNI 69
           WEGF HVALHHWG     S+ I  +SSS DL D+ + LMHIA+ +
Sbjct: 590 WEGFVHVALHHWGDTCNLSSRISRDSSSHDLDDMIMHLMHIAIKL 634



 Score = 27.3 bits (59), Expect(2) = 3e-08
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -1

Query: 79  QSTFSPLL---NRDCNFNDVIFNVEMAI 5
           +STF+ LL   N   NFNDV  N+E+AI
Sbjct: 666 RSTFNHLLSIINSSSNFNDVYSNLEVAI 693


Top