BLASTX nr result

ID: Chrysanthemum22_contig00022931 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022931
         (726 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09651.1| DNA glycosylase [Cynara cardunculus var. scolymus]      83   2e-14
gb|KVI06855.1| DNA glycosylase [Cynara cardunculus var. scolymus]      58   1e-08

>gb|KVI09651.1| DNA glycosylase [Cynara cardunculus var. scolymus]
          Length = 2029

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/106 (46%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
 Frame = -1

Query: 393  QFRPPMAATHYLQKHHLLSSLQPHRARFIPGRSPTYPHG-------ALASWN*LPATPPQ 235
            QFRPPMAATHYLQKH + S +Q H  R +P RS  Y  G       A+ SWN  P TP +
Sbjct: 859  QFRPPMAATHYLQKHQVFSGMQHHPLRSVPERSQRYIQGHDIGSKTAIMSWNLPPPTPSK 918

Query: 234  RVPR--CSAYP--TIENKQTAQPNSYNQG*LDQMRCFSNNIALPLK 109
               R   +AYP  ++E +QTA+PNSYNQ      + F ++   PLK
Sbjct: 919  ETSRYAVTAYPATSLEKRQTAKPNSYNQRLNGLNQMFQHHRNDPLK 964


>gb|KVI06855.1| DNA glycosylase [Cynara cardunculus var. scolymus]
          Length = 1972

 Score = 57.8 bits (138), Expect(2) = 1e-08
 Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
 Frame = -1

Query: 393  QFRPPMAATHYLQKHHLLSSLQPHRARFIPGRSPTYPHG-----ALASWN*LPATPPQRV 229
            QF+PP AAT  LQKH + S +QP   R    + PT  HG     A+ SWN  PATPP+  
Sbjct: 768  QFQPPRAATQNLQKHMVTSGMQPIAERL---QRPTPGHGVNPVTAMISWNRPPATPPKDY 824

Query: 228  PRCSAY----PTIENKQTAQPNSYNQ 163
             R +      P ++ K+TA  NS N+
Sbjct: 825  SRSALVTYPSPLVDKKRTATSNSSNR 850



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = -3

Query: 499 IYGNGSA-MELLNSYTRRIDPSWRAIIV-GQNVN 404
           +YGN  A ++LLNS T R++PS++ +   G N+N
Sbjct: 732 VYGNAPASLQLLNSCTGRVEPSYKVMNAGGGNIN 765


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