BLASTX nr result

ID: Chrysanthemum22_contig00022929 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022929
         (889 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY73262.1| hypothetical protein LSAT_8X131900 [Lactuca sativa]     73   4e-12

>gb|PLY73262.1| hypothetical protein LSAT_8X131900 [Lactuca sativa]
          Length = 141

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 44/78 (56%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +3

Query: 3   KRDR--AKSRHIFLQGYNLSMYTTXXXXXXXXXXXXXXXXXXXXXXXXLSFMRTGSLKRC 176
           KRDR  A+SRH+FLQGY LSMYTT                        LSFMR  SLKRC
Sbjct: 64  KRDRVRARSRHVFLQGYKLSMYTTNGKLRSEIKLKKAMVKVKTMVVSVLSFMRAASLKRC 123

Query: 177 NSKSAIAASSPTHI-RCF 227
           NSKSAIAASSP  I RCF
Sbjct: 124 NSKSAIAASSPHPIHRCF 141


Top