BLASTX nr result

ID: Chrysanthemum22_contig00022927 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022927
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF96564.1| hypothetical protein HannXRQ_Chr15g0495541 [Helia...    88   3e-17
gb|KVI07163.1| hypothetical protein Ccrd_014475 [Cynara carduncu...    88   4e-17
ref|XP_022013469.1| protein SHORTAGE IN CHIASMATA 1 isoform X2 [...    87   9e-17
ref|XP_022013468.1| protein SHORTAGE IN CHIASMATA 1 isoform X1 [...    87   1e-16
ref|XP_023753374.1| protein SHORTAGE IN CHIASMATA 1 [Lactuca sat...    62   4e-08

>gb|OTF96564.1| hypothetical protein HannXRQ_Chr15g0495541 [Helianthus annuus]
          Length = 1055

 Score = 88.2 bits (217), Expect = 3e-17
 Identities = 51/88 (57%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
 Frame = -3

Query: 376 SCERGDLHSTSILNESSKNSEGPLHSTPVKMMNSSEATH--MQAPQEASVMEPKKVNRNT 203
           S +RGD HSTSILNE SKN EGPLHST  ++ NS E+T    + PQ   + E KKVN NT
Sbjct: 400 SVKRGDFHSTSILNEISKNLEGPLHSTHTELKNSMESTEATYEVPQLPLLTESKKVNTNT 459

Query: 202 PALPDAIIIVNTQNADTGMIISRR*FYK 119
           P      IIVNTQN +T MIISRR  Y+
Sbjct: 460 P------IIVNTQNGETEMIISRRSTYQ 481


>gb|KVI07163.1| hypothetical protein Ccrd_014475 [Cynara cardunculus var. scolymus]
          Length = 1323

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 11/94 (11%)
 Frame = -3

Query: 367 RGDLHSTSILNESSKNSEGPLHSTPV---KMMNSSEAT--------HMQAPQEASVMEPK 221
           R DLHSTS L++ SKNSEG L STPV     M S +AT        H+  PQ+ S ++ K
Sbjct: 572 REDLHSTSPLSKRSKNSEGLLCSTPVAEKNTMGSMKATYEVMTSSLHLHVPQQPSALDSK 631

Query: 220 KVNRNTPALPDAIIIVNTQNADTGMIISRR*FYK 119
           K++ N P+LPDA+I+VNTQN DT MI+SRR  Y+
Sbjct: 632 KMSTNMPSLPDAVIVVNTQNVDTEMIVSRRSTYQ 665


>ref|XP_022013469.1| protein SHORTAGE IN CHIASMATA 1 isoform X2 [Helianthus annuus]
          Length = 1182

 Score = 86.7 bits (213), Expect = 9e-17
 Identities = 50/85 (58%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = -3

Query: 367 RGDLHSTSILNESSKNSEGPLHSTPVKMMNSSEATH--MQAPQEASVMEPKKVNRNTPAL 194
           RGD HSTSILNE SKN EGPLHST  ++ NS E+T    + PQ   + E KKVN NTP  
Sbjct: 530 RGDFHSTSILNEISKNLEGPLHSTHTELKNSMESTEATYEVPQLPLLTESKKVNTNTP-- 587

Query: 193 PDAIIIVNTQNADTGMIISRR*FYK 119
               IIVNTQN +T MIISRR  Y+
Sbjct: 588 ----IIVNTQNGETEMIISRRSTYQ 608


>ref|XP_022013468.1| protein SHORTAGE IN CHIASMATA 1 isoform X1 [Helianthus annuus]
          Length = 1206

 Score = 86.7 bits (213), Expect = 1e-16
 Identities = 50/85 (58%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = -3

Query: 367 RGDLHSTSILNESSKNSEGPLHSTPVKMMNSSEATH--MQAPQEASVMEPKKVNRNTPAL 194
           RGD HSTSILNE SKN EGPLHST  ++ NS E+T    + PQ   + E KKVN NTP  
Sbjct: 554 RGDFHSTSILNEISKNLEGPLHSTHTELKNSMESTEATYEVPQLPLLTESKKVNTNTP-- 611

Query: 193 PDAIIIVNTQNADTGMIISRR*FYK 119
               IIVNTQN +T MIISRR  Y+
Sbjct: 612 ----IIVNTQNGETEMIISRRSTYQ 632


>ref|XP_023753374.1| protein SHORTAGE IN CHIASMATA 1 [Lactuca sativa]
 gb|PLY93440.1| hypothetical protein LSAT_9X55980 [Lactuca sativa]
          Length = 1126

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = -3

Query: 304 HSTPVKMMNSSEATH--MQAPQEASVMEPKKVNRNTPALPDAIIIVNTQNADTGMIISRR 131
           H+ PV    S   TH   + P+  S ME KK++ NT +LPDAIIIVNTQN DT MIISRR
Sbjct: 547 HALPVVSSKSLLKTHDSTKIPELPSAMESKKIDTNTCSLPDAIIIVNTQNVDTEMIISRR 606

Query: 130 *FYK 119
             Y+
Sbjct: 607 STYQ 610


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