BLASTX nr result

ID: Chrysanthemum22_contig00022770 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022770
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022024434.1| polyadenylation and cleavage factor homolog ...    74   3e-12
ref|XP_022024430.1| polyadenylation and cleavage factor homolog ...    74   3e-12

>ref|XP_022024434.1| polyadenylation and cleavage factor homolog 4-like isoform X2
           [Helianthus annuus]
          Length = 804

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 52/132 (39%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
 Frame = +2

Query: 107 ADGKAARSQRQINTGL--SSQS-QDSFSIRP----------QQVHKLQPPSPQLPVKHAS 247
           +D KA R + Q NTG+  SSQS Q+SF I+P           ++  L+PPSPQLP+KH  
Sbjct: 448 SDDKAPRFRGQKNTGIPISSQSHQNSFQIKPPISQASNSQKSKIQNLRPPSPQLPIKHDP 507

Query: 248 FLPPYQPEPVSDFSTESPKTTXXXXXXXXXXXXXRPKSLVADIPGPPXXXXXXXXXXXIF 427
           FLPPYQPEPVSD     P +T                + +  +  P            IF
Sbjct: 508 FLPPYQPEPVSD-----PVST--------------TSTSLGPLAHPTNASSLLAAVSSIF 548

Query: 428 ANKPITSTSSPT 463
            NKPI+ST S T
Sbjct: 549 GNKPISSTVSST 560


>ref|XP_022024430.1| polyadenylation and cleavage factor homolog 4-like isoform X1
           [Helianthus annuus]
 gb|OTG35026.1| putative zinc finger, C2H2, ENTH/VHS [Helianthus annuus]
          Length = 817

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 52/132 (39%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
 Frame = +2

Query: 107 ADGKAARSQRQINTGL--SSQS-QDSFSIRP----------QQVHKLQPPSPQLPVKHAS 247
           +D KA R + Q NTG+  SSQS Q+SF I+P           ++  L+PPSPQLP+KH  
Sbjct: 461 SDDKAPRFRGQKNTGIPISSQSHQNSFQIKPPISQASNSQKSKIQNLRPPSPQLPIKHDP 520

Query: 248 FLPPYQPEPVSDFSTESPKTTXXXXXXXXXXXXXRPKSLVADIPGPPXXXXXXXXXXXIF 427
           FLPPYQPEPVSD     P +T                + +  +  P            IF
Sbjct: 521 FLPPYQPEPVSD-----PVST--------------TSTSLGPLAHPTNASSLLAAVSSIF 561

Query: 428 ANKPITSTSSPT 463
            NKPI+ST S T
Sbjct: 562 GNKPISSTVSST 573


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