BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022287
         (1384 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009763682.1| PREDICTED: DNA helicase INO80 isoform X1 [Ni...   380   e-131
ref|XP_009763684.1| PREDICTED: DNA helicase INO80 isoform X2 [Ni...   380   e-131
ref|XP_016495940.1| PREDICTED: DNA helicase INO80-like [Nicotian...   376   e-130
ref|XP_006358007.1| PREDICTED: DNA helicase INO80 [Solanum tuber...   374   e-127
ref|XP_016555336.1| PREDICTED: DNA helicase INO80 isoform X1 [Ca...   369   e-127
ref|XP_016555337.1| PREDICTED: DNA helicase INO80 isoform X2 [Ca...   369   e-127
gb|PHT54582.1| DNA helicase INO80 [Capsicum baccatum]                 369   e-126
gb|PHU16702.1| DNA helicase INO80, partial [Capsicum chinense]        369   e-126
ref|XP_015073607.1| PREDICTED: DNA helicase INO80 [Solanum penne...   371   e-126
gb|PHT80602.1| DNA helicase INO80 [Capsicum annuum]                   369   e-126
ref|XP_004236584.1| PREDICTED: DNA helicase INO80 [Solanum lycop...   369   e-125
ref|XP_012485518.1| PREDICTED: DNA helicase INO80 isoform X1 [Go...   374   e-125
gb|KJB35983.1| hypothetical protein B456_006G135500 [Gossypium r...   374   e-125
ref|XP_021988256.1| DNA helicase INO80-like [Helianthus annuus] ...   406   e-125
gb|KJB35980.1| hypothetical protein B456_006G135500 [Gossypium r...   374   e-125
gb|PPD78259.1| hypothetical protein GOBAR_DD24814 [Gossypium bar...   374   e-125
gb|KJB35981.1| hypothetical protein B456_006G135500 [Gossypium r...   373   e-125
ref|XP_017611027.1| PREDICTED: DNA helicase INO80 isoform X1 [Go...   374   e-124
ref|XP_017611028.1| PREDICTED: DNA helicase INO80 isoform X2 [Go...   374   e-124
ref|XP_016671569.1| PREDICTED: DNA helicase INO80-like isoform X...   372   e-124

>ref|XP_009763682.1| PREDICTED: DNA helicase INO80 isoform X1 [Nicotiana sylvestris]
 ref|XP_009763683.1| PREDICTED: DNA helicase INO80 isoform X1 [Nicotiana sylvestris]
          Length = 1541

 Score =  380 bits (975), Expect(2) = e-131
 Identities = 191/299 (63%), Positives = 233/299 (77%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++Y+IPP YE LA+ LNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 174  RSIYEPAFLDLGEDITYRIPPPYEKLATLLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 233

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +KR G + +AGM +PK Q+ SL ARL+AQ AN    +FSL+VS++AL++ S+PEGAAG I
Sbjct: 234  DKRLGPKRQAGMSDPKPQFESLQARLRAQPANSAGQKFSLQVSEAALEASSIPEGAAGGI 293

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+IEK EMDKIGKYW+NL
Sbjct: 294  RRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLKKDPSVIEKEEMDKIGKYWINL 353

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
             RK++PKHH++FINFHRKQLT+AKR  ETCQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 354  VRKEIPKHHKIFINFHRKQLTDAKRFSETCQREVKMKVSRSLKVMRGAAIRTRKLARDML 413

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 414  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 472



 Score =  119 bits (297), Expect(2) = e-131
 Identities = 71/148 (47%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD D++ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKRR----YSYSNLFNLESLINFQLPQLDDDFDHHGNSSQDESRGSPGGAPRNRSNGI 56

Query: 230 MSE---NRKRKSVFGSDEDPDG--GYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR++ + SDED DG  GY+ ++SEERYRAMLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRTSYSSDEDGDGDRGYNTHISEERYRAMLGEHVQKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----ASPAATRNGVPAMRSGGGSRDQK 133


>ref|XP_009763684.1| PREDICTED: DNA helicase INO80 isoform X2 [Nicotiana sylvestris]
          Length = 1540

 Score =  380 bits (975), Expect(2) = e-131
 Identities = 191/299 (63%), Positives = 233/299 (77%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++Y+IPP YE LA+ LNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 174  RSIYEPAFLDLGEDITYRIPPPYEKLATLLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 233

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +KR G + +AGM +PK Q+ SL ARL+AQ AN    +FSL+VS++AL++ S+PEGAAG I
Sbjct: 234  DKRLGPKRQAGMSDPKPQFESLQARLRAQPANSAGQKFSLQVSEAALEASSIPEGAAGGI 293

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+IEK EMDKIGKYW+NL
Sbjct: 294  RRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLKKDPSVIEKEEMDKIGKYWINL 353

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
             RK++PKHH++FINFHRKQLT+AKR  ETCQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 354  VRKEIPKHHKIFINFHRKQLTDAKRFSETCQREVKMKVSRSLKVMRGAAIRTRKLARDML 413

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 414  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 472



 Score =  119 bits (297), Expect(2) = e-131
 Identities = 71/148 (47%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD D++ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKRR----YSYSNLFNLESLINFQLPQLDDDFDHHGNSSQDESRGSPGGAPRNRSNGI 56

Query: 230 MSE---NRKRKSVFGSDEDPDG--GYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR++ + SDED DG  GY+ ++SEERYRAMLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRTSYSSDEDGDGDRGYNTHISEERYRAMLGEHVQKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----ASPAATRNGVPAMRSGGGSRDQK 133


>ref|XP_016495940.1| PREDICTED: DNA helicase INO80-like [Nicotiana tabacum]
          Length = 1495

 Score =  376 bits (965), Expect(2) = e-130
 Identities = 190/299 (63%), Positives = 232/299 (77%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++Y+IP  YE LA+ LNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 174  RSIYEPAFLDLGEDITYRIPLPYEKLATLLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 233

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +KR G + +AGM +PK Q+ SL ARL+AQ AN    +FSL+VS++AL++ S+PEGAAG I
Sbjct: 234  DKRLGPKRQAGMSDPKPQFESLQARLRAQPANSAGQKFSLQVSEAALEASSIPEGAAGGI 293

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+IEK EMDKIGKYW+NL
Sbjct: 294  RRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLKKDPSVIEKEEMDKIGKYWINL 353

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
             RK++PKHH++FINFHRKQLT+AKR  ETCQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 354  VRKEIPKHHKIFINFHRKQLTDAKRFSETCQREVKMKVSRSLKVMRGAAIRTRKLARDML 413

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 414  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 472



 Score =  119 bits (297), Expect(2) = e-130
 Identities = 71/148 (47%), Positives = 92/148 (62%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD D++ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKRR----YSYSNLFNLESLINFQLPQLDDDFDHHGNSSQDESRGSPGGAPRNRSNGI 56

Query: 230 MSE---NRKRKSVFGSDEDPDG--GYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR++ + SDED DG  GY+ ++SEERYRAMLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRTSYSSDEDGDGDRGYNTHISEERYRAMLGEHVQKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----ASPAATRNGVPAMRSGGGSRDQK 133


>ref|XP_006358007.1| PREDICTED: DNA helicase INO80 [Solanum tuberosum]
          Length = 1539

 Score =  374 bits (959), Expect(2) = e-127
 Identities = 188/299 (62%), Positives = 231/299 (77%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++YKIPP YE LA+SLNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 175  RSIYEPAFLDLGEDITYKIPPPYEKLATSLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 234

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSANR----FSLKVSDSALDSFSVPEGAAGSI 842
            +K+ G + +AGMG+PK Q+ SL ARL+AQ  N     FSL VS++AL++ S+PEGAAG I
Sbjct: 235  DKKLGPKRQAGMGDPKPQFESLQARLRAQPTNSAGQIFSLLVSEAALEASSMPEGAAGGI 294

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSI+S+GGVLQV++VKVLEKGDTYEIIERSLP++ ++  DP  IEK EM+KI KYW+NL
Sbjct: 295  RRSILSDGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLEKDPFAIEKEEMEKIEKYWINL 354

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
            ARK++PKHH++FINFHR+QLT+AKR+ ETCQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 355  ARKEIPKHHKIFINFHRRQLTDAKRIAETCQREVKMKVSRSLKVMRGAAIRTRKLARDML 414

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 415  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 473



 Score =  114 bits (284), Expect(2) = e-127
 Identities = 66/140 (47%), Positives = 86/140 (61%), Gaps = 7/140 (5%)
 Frame = +2

Query: 86  YNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMIMSE---NRKR 250
           Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG A   +N IMS     +KR
Sbjct: 7   YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGTAGNQSNGIMSGRELKKKR 66

Query: 251 KSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXXXXXFSSPVL 424
           ++ + SDE  D D  ++ Y+SEE+YR MLGEH  KYK+R                +SP  
Sbjct: 67  RTSYSSDEDGDRDRAHTTYISEEKYRTMLGEHIQKYKRRVGNSS-----------ASPAA 115

Query: 425 AYNGMPEMRSNFRPKDRKEA 484
             NG+P MR     +D+K A
Sbjct: 116 TRNGVPVMRGGGGSRDQKSA 135


>ref|XP_016555336.1| PREDICTED: DNA helicase INO80 isoform X1 [Capsicum annuum]
          Length = 1541

 Score =  369 bits (946), Expect(2) = e-127
 Identities = 184/304 (60%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = +3

Query: 480  KHXXXRSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLA 659
            ++   RS  EP FLD+G+ ++YKIPP YE L +SLNLP +SDI+V+E YLKG+LDL +LA
Sbjct: 170  RYGGDRSIYEPAFLDLGEDITYKIPPPYEKLTASLNLPALSDIQVNEIYLKGTLDLETLA 229

Query: 660  TMMATEKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEG 827
             MMA++K+ G + +AGMG+PK Q+ SL ARL+A   N    +FSL VS++AL++ S+PEG
Sbjct: 230  AMMASDKKLGPKRQAGMGDPKPQFESLQARLRAHPVNSAGQKFSLLVSEAALEASSIPEG 289

Query: 828  AAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGK 1007
            AAG IRRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ +   DPS+IEK EM+KI K
Sbjct: 290  AAGGIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKFTKDPSVIEKEEMEKIEK 349

Query: 1008 YWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKL 1187
            YW+NL RK++PKHH+ FINFHR+QLT+AKR  ETCQREVKMK+SRS+K+MRGA+IRTRKL
Sbjct: 350  YWINLVRKEIPKHHKTFINFHRRQLTDAKRFAETCQREVKMKISRSIKVMRGAAIRTRKL 409

Query: 1188 ARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFM 1367
            +RDMLVFWKRVD                                  NFLLSQTELYSHFM
Sbjct: 410  SRDMLVFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFM 469

Query: 1368 QNKT 1379
            QNK+
Sbjct: 470  QNKS 473



 Score =  115 bits (289), Expect(2) = e-127
 Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKKR----YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGVLGNQSNGI 56

Query: 230 MSE---NRKRKSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR+S + SDE  D D  YS Y+SEE+YR MLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRSSYSSDEDGDRDKAYSTYISEEKYRTMLGEHISKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----TSPAATRNGVPAMRSGGGSRDQK 133


>ref|XP_016555337.1| PREDICTED: DNA helicase INO80 isoform X2 [Capsicum annuum]
          Length = 1540

 Score =  369 bits (946), Expect(2) = e-127
 Identities = 184/304 (60%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = +3

Query: 480  KHXXXRSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLA 659
            ++   RS  EP FLD+G+ ++YKIPP YE L +SLNLP +SDI+V+E YLKG+LDL +LA
Sbjct: 170  RYGGDRSIYEPAFLDLGEDITYKIPPPYEKLTASLNLPALSDIQVNEIYLKGTLDLETLA 229

Query: 660  TMMATEKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEG 827
             MMA++K+ G + +AGMG+PK Q+ SL ARL+A   N    +FSL VS++AL++ S+PEG
Sbjct: 230  AMMASDKKLGPKRQAGMGDPKPQFESLQARLRAHPVNSAGQKFSLLVSEAALEASSIPEG 289

Query: 828  AAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGK 1007
            AAG IRRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ +   DPS+IEK EM+KI K
Sbjct: 290  AAGGIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKFTKDPSVIEKEEMEKIEK 349

Query: 1008 YWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKL 1187
            YW+NL RK++PKHH+ FINFHR+QLT+AKR  ETCQREVKMK+SRS+K+MRGA+IRTRKL
Sbjct: 350  YWINLVRKEIPKHHKTFINFHRRQLTDAKRFAETCQREVKMKISRSIKVMRGAAIRTRKL 409

Query: 1188 ARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFM 1367
            +RDMLVFWKRVD                                  NFLLSQTELYSHFM
Sbjct: 410  SRDMLVFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFM 469

Query: 1368 QNKT 1379
            QNK+
Sbjct: 470  QNKS 473



 Score =  115 bits (289), Expect(2) = e-127
 Identities = 71/148 (47%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKKR----YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGVLGNQSNGI 56

Query: 230 MSE---NRKRKSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR+S + SDE  D D  YS Y+SEE+YR MLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRSSYSSDEDGDRDKAYSTYISEEKYRTMLGEHISKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----TSPAATRNGVPAMRSGGGSRDQK 133


>gb|PHT54582.1| DNA helicase INO80 [Capsicum baccatum]
          Length = 1537

 Score =  369 bits (948), Expect(2) = e-126
 Identities = 184/304 (60%), Positives = 231/304 (75%), Gaps = 4/304 (1%)
 Frame = +3

Query: 480  KHXXXRSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLA 659
            ++   RS  EP FLD+G+ ++YKIPP YE L +SLNLP +SDI+V+E YLKG+LDL +LA
Sbjct: 170  RYGGDRSIYEPAFLDLGEDITYKIPPPYEKLTASLNLPALSDIQVNEIYLKGTLDLETLA 229

Query: 660  TMMATEKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEG 827
             MMA++K+ G + +AGMG+PK Q+ SL ARL+A   N    +FSL VS++AL++ S+PEG
Sbjct: 230  AMMASDKKLGPKRQAGMGDPKPQFESLQARLRAHPVNSAGQKFSLLVSEAALEASSIPEG 289

Query: 828  AAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGK 1007
            AAG IRRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+IEK EM+KI K
Sbjct: 290  AAGGIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLTKDPSVIEKEEMEKIEK 349

Query: 1008 YWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKL 1187
            YW+NL RK++PKHH+ FINFHR+QLT+AKR  ETCQREVKMK+SRS+K+MRGA+IRTRKL
Sbjct: 350  YWINLVRKEIPKHHKTFINFHRRQLTDAKRFAETCQREVKMKISRSIKVMRGAAIRTRKL 409

Query: 1188 ARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFM 1367
            +RDMLVFWKRVD                                  NFLLSQTELYSHFM
Sbjct: 410  SRDMLVFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFM 469

Query: 1368 QNKT 1379
            QNK+
Sbjct: 470  QNKS 473



 Score =  114 bits (285), Expect(2) = e-126
 Identities = 70/148 (47%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    ++YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKKR----FSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGVLGNQSNGI 56

Query: 230 MSE---NRKRKSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR+S + SDE  D D  YS Y+SEE+YR MLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRSSYSSDEDGDRDKAYSTYISEEKYRTMLGEHISKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----TSPAATRNGVPAMRSGGGSRDQK 133


>gb|PHU16702.1| DNA helicase INO80, partial [Capsicum chinense]
          Length = 888

 Score =  369 bits (946), Expect(2) = e-126
 Identities = 184/304 (60%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = +3

Query: 480  KHXXXRSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLA 659
            ++   RS  EP FLD+G+ ++YKIPP YE L +SLNLP +SDI+V+E YLKG+LDL +LA
Sbjct: 170  RYGGDRSIYEPAFLDLGEDITYKIPPPYEKLTASLNLPALSDIQVNEIYLKGTLDLETLA 229

Query: 660  TMMATEKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEG 827
             MMA++K+ G + +AGMG+PK Q+ SL ARL+A   N    +FSL VS++AL++ S+PEG
Sbjct: 230  AMMASDKKLGPKRQAGMGDPKPQFESLQARLRAHPVNSAGQKFSLLVSEAALEASSIPEG 289

Query: 828  AAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGK 1007
            AAG IRRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ +   DPS+IEK EM+KI K
Sbjct: 290  AAGGIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKFTKDPSVIEKEEMEKIEK 349

Query: 1008 YWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKL 1187
            YW+NL RK++PKHH+ FINFHR+QLT+AKR  ETCQREVKMK+SRS+K+MRGA+IRTRKL
Sbjct: 350  YWINLVRKEIPKHHKTFINFHRRQLTDAKRFAETCQREVKMKISRSIKVMRGAAIRTRKL 409

Query: 1188 ARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFM 1367
            +RDMLVFWKRVD                                  NFLLSQTELYSHFM
Sbjct: 410  SRDMLVFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFM 469

Query: 1368 QNKT 1379
            QNK+
Sbjct: 470  QNKS 473



 Score =  114 bits (286), Expect(2) = e-126
 Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P  +DD DY+ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKKR----YSYSNLFNLESLINFQLPLLDDDFDYHGNSSQDESRGSPGGVLGNQSNGI 56

Query: 230 MSE---NRKRKSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           MS     +KR+S + SDE  D D  YS Y+SEE+YR MLGEH  KYK+R           
Sbjct: 57  MSGRELKKKRRSSYSSDEDGDRDKAYSTYISEEKYRTMLGEHISKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----TSPAATRNGVPAMRSGGGSRDQK 133


>ref|XP_015073607.1| PREDICTED: DNA helicase INO80 [Solanum pennellii]
          Length = 1539

 Score =  371 bits (952), Expect(2) = e-126
 Identities = 186/299 (62%), Positives = 231/299 (77%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++YKIPP YE LA SLNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 175  RSIYEPAFLDLGEDITYKIPPPYEKLALSLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 234

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +K+ G + +AGMG+P+ Q+ SL ARL+AQ  N    RFSL+VS++AL++ S+PEGAAG I
Sbjct: 235  DKKLGTKRQAGMGDPRPQFESLQARLRAQPTNNAGQRFSLQVSEAALEASSMPEGAAGGI 294

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSI+S+GGVLQV++VKVLEKGDTYEIIERSLP++ ++  DP  IEK EM++IGK W+NL
Sbjct: 295  RRSILSDGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLEKDPFAIEKEEMERIGKCWINL 354

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
            ARK++PKHH++FINFHR+QLT+AKR+ E CQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 355  ARKEIPKHHKIFINFHRRQLTDAKRIAEMCQREVKMKVSRSLKVMRGAAIRTRKLARDML 414

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 415  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 473



 Score =  112 bits (279), Expect(2) = e-126
 Identities = 65/140 (46%), Positives = 85/140 (60%), Gaps = 7/140 (5%)
 Frame = +2

Query: 86  YNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMIMSE---NRKR 250
           Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG A   +N  MS     +KR
Sbjct: 7   YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGTAGNQSNGTMSGRELKKKR 66

Query: 251 KSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXXXXXFSSPVL 424
           ++ + SDE  D D  ++ Y+SEE+YR MLGEH  KYK+R                +SP  
Sbjct: 67  RTSYSSDEDGDRDRAHTTYISEEKYRTMLGEHVQKYKRRLGNSS-----------ASPAA 115

Query: 425 AYNGMPEMRSNFRPKDRKEA 484
             NG+P MR     +D+K A
Sbjct: 116 IRNGVPVMRGGGGSRDQKSA 135


>gb|PHT80602.1| DNA helicase INO80 [Capsicum annuum]
          Length = 1540

 Score =  369 bits (946), Expect(2) = e-126
 Identities = 184/304 (60%), Positives = 230/304 (75%), Gaps = 4/304 (1%)
 Frame = +3

Query: 480  KHXXXRSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLA 659
            ++   RS  EP FLD+G+ ++YKIPP YE L +SLNLP +SDI+V+E YLKG+LDL +LA
Sbjct: 170  RYGGDRSIYEPAFLDLGEDITYKIPPPYEKLTASLNLPALSDIQVNEIYLKGTLDLETLA 229

Query: 660  TMMATEKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEG 827
             MMA++K+ G + +AGMG+PK Q+ SL ARL+A   N    +FSL VS++AL++ S+PEG
Sbjct: 230  AMMASDKKLGPKRQAGMGDPKPQFESLQARLRAHPVNSAGQKFSLLVSEAALEASSIPEG 289

Query: 828  AAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGK 1007
            AAG IRRSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ +   DPS+IEK EM+KI K
Sbjct: 290  AAGGIRRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKFTKDPSVIEKEEMEKIEK 349

Query: 1008 YWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKL 1187
            YW+NL RK++PKHH+ FINFHR+QLT+AKR  ETCQREVKMK+SRS+K+MRGA+IRTRKL
Sbjct: 350  YWINLVRKEIPKHHKTFINFHRRQLTDAKRFAETCQREVKMKISRSIKVMRGAAIRTRKL 409

Query: 1188 ARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFM 1367
            +RDMLVFWKRVD                                  NFLLSQTELYSHFM
Sbjct: 410  SRDMLVFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFM 469

Query: 1368 QNKT 1379
            QNK+
Sbjct: 470  QNKS 473



 Score =  113 bits (283), Expect(2) = e-126
 Identities = 70/148 (47%), Positives = 88/148 (59%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           MD  +R    Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG     +N I
Sbjct: 1   MDPKKR----YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGVLGNQSNGI 56

Query: 230 M---SENRKRKSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXX 394
           M      +KR+S + SDE  D D  YS Y+SEE+YR MLGEH  KYK+R           
Sbjct: 57  MFGRELKKKRRSSYSSDEDGDRDKAYSTYISEEKYRTMLGEHISKYKRRLGNSS------ 110

Query: 395 XXXXFSSPVLAYNGMPEMRSNFRPKDRK 478
                +SP    NG+P MRS    +D+K
Sbjct: 111 -----TSPAAPRNGVPAMRSGGGSRDQK 133


>ref|XP_004236584.1| PREDICTED: DNA helicase INO80 [Solanum lycopersicum]
          Length = 1539

 Score =  369 bits (947), Expect(2) = e-125
 Identities = 186/299 (62%), Positives = 229/299 (76%), Gaps = 4/299 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS  EP FLD+G+ ++YKIPP YE LA SLNLP MSDI+V+E YLKG+LDL +LA MMA+
Sbjct: 175  RSIYEPAFLDLGEDITYKIPPPYEKLALSLNLPTMSDIQVNEIYLKGTLDLETLAAMMAS 234

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +K+ G + +AGMG+PK Q+ SL ARL+AQ  N    RFSL VS++AL++ S+PEGAAG I
Sbjct: 235  DKKLGTKRQAGMGDPKPQFESLQARLRAQPTNNAGQRFSLLVSEAALEASSMPEGAAGGI 294

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RR I+S+GGVLQV++VKVLEKGDTYEIIERSLP++ ++  DP  IEK EM++IGK W+NL
Sbjct: 295  RRCILSDGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLEKDPFAIEKEEMERIGKCWINL 354

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
            ARK++PKHH++FINFHR+QLT+AKR+ E CQREVKMK+SRSLK+MRGA+IRTRKLARDML
Sbjct: 355  ARKEIPKHHKIFINFHRRQLTDAKRIAEMCQREVKMKVSRSLKVMRGAAIRTRKLARDML 414

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKT 1379
            VFWKRVD                                  NFLLSQTELYSHFMQNK+
Sbjct: 415  VFWKRVDKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKS 473



 Score =  110 bits (275), Expect(2) = e-125
 Identities = 65/140 (46%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
 Frame = +2

Query: 86  YNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMIMSE---NRKR 250
           Y+YSNLFNLESL+ FQ+P+ +DD DY+ NSSQDESRG  GG A    N  MS     +KR
Sbjct: 7   YSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGTAGNQINGTMSGRELKKKR 66

Query: 251 KSVFGSDE--DPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXXXXXFSSPVL 424
           ++ + SDE  D D  ++ Y+SEE+YR MLGEH  KYK+R                +SP  
Sbjct: 67  RTSYSSDEDGDRDRAHTTYISEEKYRTMLGEHVQKYKRRLGNSS-----------ASPAA 115

Query: 425 AYNGMPEMRSNFRPKDRKEA 484
             NG+P MR     +D+K A
Sbjct: 116 IRNGVPVMRGGGGSRDQKSA 135


>ref|XP_012485518.1| PREDICTED: DNA helicase INO80 isoform X1 [Gossypium raimondii]
 gb|KJB35979.1| hypothetical protein B456_006G135500 [Gossypium raimondii]
          Length = 1536

 Score =  374 bits (960), Expect(2) = e-125
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 161  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 220

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 221  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 280

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 281  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 339

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 340  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 399

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 400  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 459

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 460  IQQTELYSHFMQNK 473



 Score =  105 bits (262), Expect(2) = e-125
 Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRG  GG      N  
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT 60

Query: 230 MSE------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXX 391
           MSE       RK +    SDE+ D     +++EERYR+MLGEH  KYK+R          
Sbjct: 61  MSERELSLAKRKWRGALNSDEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS----- 115

Query: 392 XXXXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                 +SP  +  G+P  +SN    K+RK
Sbjct: 116 ------ASPAPSRMGIPAPKSNLGSSKNRK 139


>gb|KJB35983.1| hypothetical protein B456_006G135500 [Gossypium raimondii]
          Length = 1391

 Score =  374 bits (960), Expect(2) = e-125
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 161  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 220

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 221  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 280

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 281  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 339

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 340  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 399

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 400  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 459

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 460  IQQTELYSHFMQNK 473



 Score =  105 bits (262), Expect(2) = e-125
 Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRG  GG      N  
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT 60

Query: 230 MSE------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXX 391
           MSE       RK +    SDE+ D     +++EERYR+MLGEH  KYK+R          
Sbjct: 61  MSERELSLAKRKWRGALNSDEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS----- 115

Query: 392 XXXXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                 +SP  +  G+P  +SN    K+RK
Sbjct: 116 ------ASPAPSRMGIPAPKSNLGSSKNRK 139


>ref|XP_021988256.1| DNA helicase INO80-like [Helianthus annuus]
 gb|OTG10832.1| putative INO80-like protein [Helianthus annuus]
          Length = 1478

 Score =  406 bits (1044), Expect = e-125
 Identities = 204/300 (68%), Positives = 242/300 (80%), Gaps = 4/300 (1%)
 Frame = +3

Query: 495  RSYKEPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMAT 674
            RS+ EP++LDIGDG+SY+IPPTYEMLA++LNLP+MS+I+VDEFYLKG+LDLGSLA+MM+T
Sbjct: 136  RSFTEPIYLDIGDGVSYRIPPTYEMLATTLNLPKMSEIQVDEFYLKGTLDLGSLASMMST 195

Query: 675  EKRFGHRSRAGMGEPKTQYVSLHARLKAQSAN----RFSLKVSDSALDSFSVPEGAAGSI 842
            +K+FG R+R G+GEPK QY SL ARLKA+S N    +FSLKVS+ AL+S+SVPEGAAG I
Sbjct: 196  DKKFGLRNRVGLGEPKPQYESLQARLKARSINNSPQKFSLKVSNIALESYSVPEGAAGGI 255

Query: 843  RRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNL 1022
            RRSIMS+ G LQVH+VKVLEKGDTYEIIERSLP+++++NND  +IEK EM KIG YWVN+
Sbjct: 256  RRSIMSDSGTLQVHYVKVLEKGDTYEIIERSLPKKRKVNNDLFVIEKEEMGKIGIYWVNM 315

Query: 1023 ARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDML 1202
             RKD+PKHHRVFI+FHRKQLT+AKR  E CQREVKMK++RSLKLMRGAS+RTRKLARDML
Sbjct: 316  VRKDIPKHHRVFISFHRKQLTDAKRFAENCQREVKMKVNRSLKLMRGASLRTRKLARDML 375

Query: 1203 VFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNKTA 1382
            VFWKR+D                                  NFLLSQTELYSHFMQNKTA
Sbjct: 376  VFWKRIDKEMAEIRKKEEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTA 435



 Score =  129 bits (324), Expect = 4e-28
 Identities = 63/102 (61%), Positives = 75/102 (73%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRGGGRADRINNMIMS 235
           MDSN+   N Y YSNLFNLESLM FQ+P+PED  DY   SSQDESRGG         +MS
Sbjct: 1   MDSNEHLRNQYTYSNLFNLESLMSFQLPQPEDKFDYEAYSSQDESRGGHAG------VMS 54

Query: 236 ENRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKR 361
           E ++ +SV+ SDED  GGY+ Y++EERYRAMLGEH +KYKKR
Sbjct: 55  EKKRTRSVYDSDEDHHGGYATYIAEERYRAMLGEHVNKYKKR 96


>gb|KJB35980.1| hypothetical protein B456_006G135500 [Gossypium raimondii]
          Length = 1533

 Score =  374 bits (960), Expect(2) = e-125
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 158  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 217

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 218  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 277

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 278  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 336

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 337  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 396

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 397  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 456

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 457  IQQTELYSHFMQNK 470



 Score =  105 bits (261), Expect(2) = e-125
 Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRGGGRADRINNMIMS 235
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRGG  +    N  MS
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGGAMSHH-GNGTMS 59

Query: 236 E------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXX 397
           E       RK +    SDE+ D     +++EERYR+MLGEH  KYK+R            
Sbjct: 60  ERELSLAKRKWRGALNSDEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS------- 112

Query: 398 XXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
               +SP  +  G+P  +SN    K+RK
Sbjct: 113 ----ASPAPSRMGIPAPKSNLGSSKNRK 136


>gb|PPD78259.1| hypothetical protein GOBAR_DD24814 [Gossypium barbadense]
          Length = 1530

 Score =  374 bits (960), Expect(2) = e-125
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 158  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 217

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 218  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 277

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 278  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 336

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 337  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 396

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 397  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 456

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 457  IQQTELYSHFMQNK 470



 Score =  105 bits (261), Expect(2) = e-125
 Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRGGGRADRINNMIMS 235
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRGG  +    N  MS
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGGAMSHH-GNGTMS 59

Query: 236 E------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXX 397
           E       RK +    SDE+ D     +++EERYR+MLGEH  KYK+R            
Sbjct: 60  ERELSLAKRKWRGALNSDEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS------- 112

Query: 398 XXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
               +SP  +  G+P  +SN    K+RK
Sbjct: 113 ----ASPAPSRMGIPAPKSNLGSSKNRK 136


>gb|KJB35981.1| hypothetical protein B456_006G135500 [Gossypium raimondii]
          Length = 1524

 Score =  373 bits (958), Expect(2) = e-125
 Identities = 189/294 (64%), Positives = 228/294 (77%), Gaps = 4/294 (1%)
 Frame = +3

Query: 507  EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFYLKGSLDLGSLATMMATEKRF 686
            EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFYLKG+LDLGSLATMMA++KRF
Sbjct: 169  EPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFYLKGTLDLGSLATMMASDKRF 228

Query: 687  GHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSDSALDSFSVPEGAAGSIRRSI 854
            G RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+SAL+S S+PEGAAG+++RSI
Sbjct: 229  GSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSESALNS-SIPEGAAGNLQRSI 287

Query: 855  MSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSMIEKNEMDKIGKYWVNLARKD 1034
            +SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+IE+ EM+KIGK WV + R+D
Sbjct: 288  LSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSVIEREEMEKIGKVWVTIVRRD 347

Query: 1035 VPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKLMRGASIRTRKLARDMLVFWK 1214
            +PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK MRGA++RTRKLARDML+FWK
Sbjct: 348  IPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKFMRGAALRTRKLARDMLLFWK 407

Query: 1215 RVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFLLSQTELYSHFMQNK 1376
            RVD                                  NFL+ QTELYSHFMQNK
Sbjct: 408  RVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNK 461



 Score =  105 bits (262), Expect(2) = e-125
 Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 9/150 (6%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRG  GG      N  
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT 60

Query: 230 MSE------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXX 391
           MSE       RK +    SDE+ D     +++EERYR+MLGEH  KYK+R          
Sbjct: 61  MSERELSLAKRKWRGALNSDEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS----- 115

Query: 392 XXXXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                 +SP  +  G+P  +SN    K+RK
Sbjct: 116 ------ASPAPSRMGIPAPKSNLGSSKNRK 139


>ref|XP_017611027.1| PREDICTED: DNA helicase INO80 isoform X1 [Gossypium arboreum]
 gb|KHG10532.1| DNA helicase INO80 -like protein [Gossypium arboreum]
          Length = 1536

 Score =  374 bits (960), Expect(2) = e-124
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 161  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 220

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 221  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 280

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 281  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 339

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 340  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 399

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 400  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 459

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 460  IQQTELYSHFMQNK 473



 Score =  103 bits (256), Expect(2) = e-124
 Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 9/150 (6%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRG  GG      N  
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT 60

Query: 230 MSE------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXX 391
           MSE       RK +    S+E+ D     +++EERYR+MLGEH  KYK+R          
Sbjct: 61  MSERELSLAKRKWRGALNSEEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTSV---- 116

Query: 392 XXXXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                  SP  +  G+P  +SN    K+RK
Sbjct: 117 -------SPAPSRMGIPAPKSNLGSSKNRK 139


>ref|XP_017611028.1| PREDICTED: DNA helicase INO80 isoform X2 [Gossypium arboreum]
          Length = 1533

 Score =  374 bits (960), Expect(2) = e-124
 Identities = 194/314 (61%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 158  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 217

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 218  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 277

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 278  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 336

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++KR  E CQREVK+K+SRSLK 
Sbjct: 337  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSKRFAENCQREVKLKVSRSLKF 396

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 397  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 456

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 457  IQQTELYSHFMQNK 470



 Score =  102 bits (255), Expect(2) = e-124
 Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRGGGRADRINNMIMS 235
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRGG  +    N  MS
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGGAMSHH-GNGTMS 59

Query: 236 E------NRKRKSVFGSDEDPDGGYSKYVSEERYRAMLGEHAHKYKKRXXXXXXXXXXXX 397
           E       RK +    S+E+ D     +++EERYR+MLGEH  KYK+R            
Sbjct: 60  ERELSLAKRKWRGALNSEEEDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTSV------ 113

Query: 398 XXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                SP  +  G+P  +SN    K+RK
Sbjct: 114 -----SPAPSRMGIPAPKSNLGSSKNRK 136


>ref|XP_016671569.1| PREDICTED: DNA helicase INO80-like isoform X1 [Gossypium hirsutum]
          Length = 1537

 Score =  372 bits (954), Expect(2) = e-124
 Identities = 193/314 (61%), Positives = 233/314 (74%), Gaps = 7/314 (2%)
 Frame = +3

Query: 456  ISDQRTVKKHXXXRSYK---EPVFLDIGDGMSYKIPPTYEMLASSLNLPRMSDIRVDEFY 626
            +S QR    H      K   EP +LDIG+G+++KIPPTY+ LA SLNLP  SDIRV+EFY
Sbjct: 162  VSSQRFANYHEADLVPKIMYEPAYLDIGEGITFKIPPTYDKLALSLNLPSFSDIRVEEFY 221

Query: 627  LKGSLDLGSLATMMATEKRFGHRSRAGMGEPKTQYVSLHARLKA----QSANRFSLKVSD 794
            LKG+LDLGSLATMMA++KRFG RSRAGMGEP  QY SL ARLKA     S+ +FSLKVS+
Sbjct: 222  LKGTLDLGSLATMMASDKRFGSRSRAGMGEPHPQYESLQARLKALAASNSSQKFSLKVSE 281

Query: 795  SALDSFSVPEGAAGSIRRSIMSEGGVLQVHFVKVLEKGDTYEIIERSLPRRQQMNNDPSM 974
            SAL+S S+PEGAAG+++RSI+SEGGVLQV++VKVLEKGDTYEIIERSLP++ ++  DPS+
Sbjct: 282  SALNS-SIPEGAAGNLQRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKPKVKKDPSV 340

Query: 975  IEKNEMDKIGKYWVNLARKDVPKHHRVFINFHRKQLTEAKRVVETCQREVKMKMSRSLKL 1154
            IE+ EM+KIGK WV + R+D+PKHHR F NFHRKQL ++ R  E CQREVK+K+SRSLK 
Sbjct: 341  IEREEMEKIGKVWVTIVRRDIPKHHRNFTNFHRKQLIDSTRFAENCQREVKLKVSRSLKF 400

Query: 1155 MRGASIRTRKLARDMLVFWKRVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFL 1334
            MRGA++RTRKLARDML+FWKRVD                                  NFL
Sbjct: 401  MRGAALRTRKLARDMLLFWKRVDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFL 460

Query: 1335 LSQTELYSHFMQNK 1376
            + QTELYSHFMQNK
Sbjct: 461  IQQTELYSHFMQNK 474



 Score =  104 bits (260), Expect(2) = e-124
 Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
 Frame = +2

Query: 56  MDSNQRQTNPYNYSNLFNLESLMKFQIPKPEDDSDYYVNSSQDESRG--GGRADRINNMI 229
           M+  ++  + ++YS LFNLE LM F++P+P+DD DYY NSSQDESRG  GG      N  
Sbjct: 1   MEPRRQSKDSFSYSGLFNLEPLMNFKVPQPDDDFDYYGNSSQDESRGSQGGAMSHHGNGT 60

Query: 230 MSE------NRKRKSVFGSDEDPDGGY-SKYVSEERYRAMLGEHAHKYKKRXXXXXXXXX 388
           MSE       RK +    SDE+ D  Y   +++EERYR+MLGEH  KYK+R         
Sbjct: 61  MSERELSLAKRKWRGALNSDEEDDDDYQGTHITEERYRSMLGEHVQKYKRRFKDTS---- 116

Query: 389 XXXXXXFSSPVLAYNGMPEMRSNF-RPKDRK 478
                  +SP  +  G+P  +SN    K+RK
Sbjct: 117 -------ASPAPSRMGIPAPKSNLGSSKNRK 140