BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022285
         (1039 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNR63054.1| hypothetical protein PHYPA_001479 [Physcomitrella...   177   3e-61
ref|XP_001779005.1| predicted protein [Physcomitrella patens]         177   3e-61
gb|KVH98529.1| RNA polymerase Rpb1, domain 3 [Cynara cardunculus...   194   2e-57
ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [He...   203   1e-54
gb|AAR05864.1| RNA polymerase II largest subunit, partial [Magno...   189   1e-54
gb|AAR05865.1| RNA polymerase II largest subunit, partial [Ginkg...   187   1e-53
gb|AAR05868.1| RNA polymerase II largest subunit, partial [Nymph...   185   8e-53
gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa]     197   1e-52
ref|XP_023768211.1| DNA-directed RNA polymerase II subunit 1 [La...   197   1e-52
gb|ALI93494.1| RNA polymerase II largest subunit, partial [Cycas...   181   1e-52
gb|ALI93496.1| RNA polymerase II largest subunit, partial [Cycas...   181   2e-52
gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhodo...   190   7e-52
gb|AAR05863.1| RNA polymerase II largest subunit, partial [Cycas...   181   2e-51
ref|XP_017405667.1| PREDICTED: DNA-directed RNA polymerase II su...   178   3e-51
ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II su...   193   4e-51
gb|KZM93495.1| hypothetical protein DCAR_016740 [Daucus carota s...   193   4e-51
gb|AAR05869.1| RNA polymerase II largest subunit, partial [Zea m...   179   9e-51
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su...   191   1e-50
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir...   189   2e-50
emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]     191   2e-50

>gb|PNR63054.1| hypothetical protein PHYPA_001479 [Physcomitrella patens]
          Length = 1820

 Score =  177 bits (450), Expect(2) = 3e-61
 Identities = 95/165 (57%), Positives = 114/165 (69%)
 Frame = -1

Query: 709  LPTPIVTQRLQTKHYLVVLIFSW*YELMFPIHDFFMNIFETGYLTPGDTQLRIEKGEVIT 530
            +PT +  + L T   +  LI      LM     F+    E G L+PGDTQ+RIEKGEV+ 
Sbjct: 578  IPTILKPRPLWTGKQIFTLIIPKQINLMRQA--FWHPDSEVGDLSPGDTQVRIEKGEVVA 635

Query: 529  GTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLINYWLLQQRFNISIGDTIAYAS 350
            GTLCK  LG   GS IHVIW E+GPD A KFLGHTQ L+NYWLLQQ F+I IGDTIA A+
Sbjct: 636  GTLCKKTLGTGQGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAA 695

Query: 349  NMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKSFENKVN 215
             ME INETI  AKN+V +LI+  QD QLE +PGRT+ +SFEN+VN
Sbjct: 696  TMEKINETISIAKNDVKDLIKMAQDKQLEAQPGRTMKESFENRVN 740



 Score = 87.8 bits (216), Expect(2) = 3e-61
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK +VSPQ+NRPV+GI+QDTL G R++TKR  FI
Sbjct: 500 GDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVIGIVQDTLLGCRKVTKRDTFI 557


>ref|XP_001779005.1| predicted protein [Physcomitrella patens]
          Length = 1646

 Score =  177 bits (450), Expect(2) = 3e-61
 Identities = 95/165 (57%), Positives = 114/165 (69%)
 Frame = -1

Query: 709  LPTPIVTQRLQTKHYLVVLIFSW*YELMFPIHDFFMNIFETGYLTPGDTQLRIEKGEVIT 530
            +PT +  + L T   +  LI      LM     F+    E G L+PGDTQ+RIEKGEV+ 
Sbjct: 578  IPTILKPRPLWTGKQIFTLIIPKQINLMRQA--FWHPDSEVGDLSPGDTQVRIEKGEVVA 635

Query: 529  GTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLINYWLLQQRFNISIGDTIAYAS 350
            GTLCK  LG   GS IHVIW E+GPD A KFLGHTQ L+NYWLLQQ F+I IGDTIA A+
Sbjct: 636  GTLCKKTLGTGQGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAA 695

Query: 349  NMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKSFENKVN 215
             ME INETI  AKN+V +LI+  QD QLE +PGRT+ +SFEN+VN
Sbjct: 696  TMEKINETISIAKNDVKDLIKMAQDKQLEAQPGRTMKESFENRVN 740



 Score = 87.8 bits (216), Expect(2) = 3e-61
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK +VSPQ+NRPV+GI+QDTL G R++TKR  FI
Sbjct: 500 GDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVIGIVQDTLLGCRKVTKRDTFI 557


>gb|KVH98529.1| RNA polymerase Rpb1, domain 3 [Cynara cardunculus var. scolymus]
          Length = 200

 Score =  194 bits (492), Expect = 2e-57
 Identities = 99/136 (72%), Positives = 109/136 (80%), Gaps = 10/136 (7%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWG----------EIGPDVAS 443
           ETG+LTPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW           E+GPD A 
Sbjct: 58  ETGHLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWCVFWTTGIFSLEVGPDAAR 117

Query: 442 KFLGHTQCLINYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLE 263
           KFLGHTQ L+NYWLLQQ F+I IGDTIA A+ METINETI +AKNEV ELIRA QD QLE
Sbjct: 118 KFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQDKQLE 177

Query: 262 VEPGRTIMKSFENKVN 215
            EPGRT+M+SFEN+VN
Sbjct: 178 AEPGRTMMESFENRVN 193


>ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [Helianthus annuus]
 gb|OTG28102.1| putative RNA polymerase II large subunit [Helianthus annuus]
          Length = 1824

 Score =  203 bits (517), Expect = 1e-54
 Identities = 100/126 (79%), Positives = 109/126 (86%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG+LTPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 612 ETGHLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLV 671

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA AS METINETI +AKNEV ELIRA QD QLE EPGRT+M+S
Sbjct: 672 NYWLLQQGFSIGIGDTIADASTMETINETISKAKNEVKELIRAAQDKQLEAEPGRTMMES 731

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 732 FENRVN 737



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R++TKR  FI
Sbjct: 497 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFI 554


>gb|AAR05864.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
          Length = 280

 Score =  189 bits (481), Expect = 1e-54
 Identities = 90/126 (71%), Positives = 105/126 (83%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIE+GE++ GTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 112 ETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLV 171

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA AS ME INETI +AKNEV ELI+A Q+ QLE EPGRT+M+S
Sbjct: 172 NYWLLQNGFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMES 231

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 232 FENRVN 237



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = -3

Query: 971 SMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           +MHVPQS ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR  FI
Sbjct: 1   NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI 54


>gb|AAR05865.1| RNA polymerase II largest subunit, partial [Ginkgo biloba]
          Length = 280

 Score =  187 bits (475), Expect = 1e-53
 Identities = 89/126 (70%), Positives = 106/126 (84%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDT +RIEKGEV++GTLCK  LG  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 112 ETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLV 171

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ METINETI +AKNEV +LI+A Q+  LE EPGRT+M+S
Sbjct: 172 NYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKQLIKAAQEKALEAEPGRTMMES 231

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 232 FENRVN 237



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = -3

Query: 971 SMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           +MHVPQS ETR EVLEL MVPK IVSP++NRPVMGI+QDTL G R++TKR  FI
Sbjct: 1   NMHVPQSFETRAEVLELMMVPKCIVSPKSNRPVMGIVQDTLLGCRKVTKRDTFI 54


>gb|AAR05868.1| RNA polymerase II largest subunit, partial [Nymphaea odorata]
          Length = 280

 Score =  185 bits (469), Expect = 8e-53
 Identities = 87/126 (69%), Positives = 105/126 (83%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDT +RIE+GE+++GTLCK  +G  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 112 ETGFITPGDTCVRIERGELLSGTLCKKTMGTSSGSLIHVIWEEVGPDAARKFLGHTQWLV 171

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA AS ME INETI +AKNEV ELI+A Q+ QLE EPGRT+M+S
Sbjct: 172 NYWLLQNAFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQEKQLEAEPGRTMMES 231

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 232 FENRVN 237



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 971 SMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           +MHVPQ  ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR  FI
Sbjct: 1   NMHVPQCFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI 54


>gb|PLY82164.1| hypothetical protein LSAT_1X12220 [Lactuca sativa]
          Length = 1319

 Score =  197 bits (501), Expect = 1e-52
 Identities = 96/126 (76%), Positives = 107/126 (84%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 137 ETGHMTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLV 196

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ METINETI +AKNEV ELIR   D QLE EPGRT+M+S
Sbjct: 197 NYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRTAHDKQLEPEPGRTMMES 256

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 257 FENRVN 262



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R++TKR  FI
Sbjct: 22  GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFI 79


>ref|XP_023768211.1| DNA-directed RNA polymerase II subunit 1 [Lactuca sativa]
          Length = 1819

 Score =  197 bits (501), Expect = 1e-52
 Identities = 96/126 (76%), Positives = 107/126 (84%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 612 ETGHMTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLV 671

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ METINETI +AKNEV ELIR   D QLE EPGRT+M+S
Sbjct: 672 NYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRTAHDKQLEPEPGRTMMES 731

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 732 FENRVN 737



 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R++TKR  FI
Sbjct: 497 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFI 554


>gb|ALI93494.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93495.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93497.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93498.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93500.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93502.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93504.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
          Length = 199

 Score =  181 bits (460), Expect = 1e-52
 Identities = 87/126 (69%), Positives = 103/126 (81%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDT +RIEKGEV++GTLCK  LG  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 73  ETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLV 132

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ METINETI +AK EVN+LI+      LE EPGRT+M+S
Sbjct: 133 NYWLLQQGFSIGIGDTIADAATMETINETISKAKAEVNQLIQLAHQKALEAEPGRTMMES 192

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 193 FENRVN 198


>gb|ALI93496.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93499.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93501.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93503.1| RNA polymerase II largest subunit, partial [Cycas diannanensis]
 gb|ALI93505.1| RNA polymerase II largest subunit, partial [Cycas tanqingii]
 gb|ALI93506.1| RNA polymerase II largest subunit, partial [Cycas dolichophylla]
          Length = 199

 Score =  181 bits (459), Expect = 2e-52
 Identities = 87/126 (69%), Positives = 102/126 (80%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDT +RIEKGEV++GTLCK  LG  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 73  ETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLV 132

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A  METINETI +AK EVN+LI+      LE EPGRT+M+S
Sbjct: 133 NYWLLQQGFSIGIGDTIADAGTMETINETISKAKAEVNQLIQLAHQKALEAEPGRTMMES 192

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 193 FENRVN 198


>gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 589

 Score =  190 bits (483), Expect = 7e-52
 Identities = 93/126 (73%), Positives = 104/126 (82%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG +TPGDT +RIEKGEVITGTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 121 ETGPITPGDTHVRIEKGEVITGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQRLV 180

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA A+ ME INETI +AKNEV +LIRA QD QLE EPGRT+M+S
Sbjct: 181 NYWLLQSGFSIGIGDTIADAATMEKINETISKAKNEVKDLIRAAQDKQLEAEPGRTMMES 240

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 241 FENRVN 246



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R+ITKR  FI
Sbjct: 6   GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFI 63


>gb|AAR05863.1| RNA polymerase II largest subunit, partial [Cycas revoluta]
          Length = 280

 Score =  181 bits (460), Expect = 2e-51
 Identities = 87/126 (69%), Positives = 103/126 (81%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDT +RIEKGEV++GTLCK  LG  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 112 ETGFITPGDTCVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAARKFLGHTQWLV 171

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ METINETI +AK EVN+LI+      LE EPGRT+M+S
Sbjct: 172 NYWLLQQGFSIGIGDTIADAATMETINETISKAKAEVNQLIQLAHQKALEAEPGRTMMES 231

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 232 FENRVN 237



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = -3

Query: 971 SMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           +MHVPQS ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR  FI
Sbjct: 1   NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI 54


>ref|XP_017405667.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Vigna
           angularis]
          Length = 206

 Score =  178 bits (452), Expect = 3e-51
 Identities = 86/126 (68%), Positives = 100/126 (79%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           E G +TPGDT +RIEKGE++TGTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 79  ERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLV 138

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA AS METIN+TI  AK +V +LIR  Q+ +LE EPGRT+M S
Sbjct: 139 NYWLLQHAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKLEAEPGRTMMDS 198

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 199 FENRVN 204


>ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
           subsp. sativus]
          Length = 1843

 Score =  193 bits (490), Expect = 4e-51
 Identities = 95/126 (75%), Positives = 105/126 (83%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 612 ETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLV 671

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ ME INETI  AKN V ELIR+ QD  LE EPGRT+M+S
Sbjct: 672 NYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDLEPEPGRTMMES 731

Query: 232 FENKVN 215
           FENKVN
Sbjct: 732 FENKVN 737



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R+ITKR  FI
Sbjct: 497 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFI 554


>gb|KZM93495.1| hypothetical protein DCAR_016740 [Daucus carota subsp. sativus]
          Length = 2159

 Score =  193 bits (490), Expect = 4e-51
 Identities = 95/126 (75%), Positives = 105/126 (83%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIEKGEVITGTLCK  LGA TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 611 ETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAARKFLGHTQWLV 670

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQQ F+I IGDTIA A+ ME INETI  AKN V ELIR+ QD  LE EPGRT+M+S
Sbjct: 671 NYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDLEPEPGRTMMES 730

Query: 232 FENKVN 215
           FENKVN
Sbjct: 731 FENKVN 736



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R+ITKR  FI
Sbjct: 496 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFI 553


>gb|AAR05869.1| RNA polymerase II largest subunit, partial [Zea mays]
          Length = 280

 Score =  179 bits (455), Expect = 9e-51
 Identities = 85/126 (67%), Positives = 102/126 (80%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           E G++TPGDT +RIEKGE+++GTLCK  LG  +GS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 112 EKGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDAARKFLGHTQWLV 171

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA AS METIN+TI +AKN V ELI+   + QLE EPGRT+M+S
Sbjct: 172 NYWLLQNGFSIGIGDTIADASTMETINDTISKAKNAVKELIKKAHEKQLEAEPGRTMMES 231

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 232 FENRVN 237



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -3

Query: 971 SMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           +MHVPQS ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR   I
Sbjct: 1   NMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTLI 54


>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
           nucifera]
          Length = 1848

 Score =  191 bits (486), Expect = 1e-50
 Identities = 91/126 (72%), Positives = 106/126 (84%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           ETG++TPGDTQ+RIE+GE++TGTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 612 ETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLV 671

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA A+ ME INETI +AKNEV ELIRA Q+ QLE EPGRT+M+S
Sbjct: 672 NYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMES 731

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 732 FENRVN 737



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR  FI
Sbjct: 497 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI 554


>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
          Length = 780

 Score =  189 bits (480), Expect = 2e-50
 Identities = 91/126 (72%), Positives = 104/126 (82%)
 Frame = -1

Query: 592 ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
           E G++TPGDTQ+RIEKGE++TGTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 289 EKGFITPGDTQVRIEKGELLTGTLCKKTLGTGTGSLIHVIWEEVGPDAARKFLGHTQWLV 348

Query: 412 NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
           NYWLLQ  F+I IGDTIA A+ ME INETI  AKNEV ELIRA Q+ QLE EPGRT+M+S
Sbjct: 349 NYWLLQNAFSIGIGDTIADAATMEKINETIQNAKNEVKELIRAAQEKQLEAEPGRTMMES 408

Query: 232 FENKVN 215
           FEN+VN
Sbjct: 409 FENRVN 414



 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/58 (79%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQANRPVMGI+QDTL G R+ITKR  FI
Sbjct: 174 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFI 231


>emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1565

 Score =  191 bits (484), Expect = 2e-50
 Identities = 91/126 (72%), Positives = 105/126 (83%)
 Frame = -1

Query: 592  ETGYLTPGDTQLRIEKGEVITGTLCK*ILGAYTGSFIHVIWGEIGPDVASKFLGHTQCLI 413
            ETG++TPGDTQ+RIEKGE++ GTLCK  LG  TGS IHVIW E+GPD A KFLGHTQ L+
Sbjct: 660  ETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLV 719

Query: 412  NYWLLQQRFNISIGDTIAYASNMETINETIFRAKNEVNELIRATQDNQLEVEPGRTIMKS 233
            NYWLLQ  F+I IGDTIA A+ ME INETI +AKNEV ELIRA Q+ QLE EPGRT+M+S
Sbjct: 720  NYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQLEAEPGRTMMES 779

Query: 232  FENKVN 215
            FEN+VN
Sbjct: 780  FENRVN 785



 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -3

Query: 983 GDEISMHVPQSCETRVEVLELTMVPKYIVSPQANRPVMGIMQDTL*GYRQITKRGAFI 810
           GDE++MHVPQS ETR EVLEL MVPK IVSPQ+NRPVMGI+QDTL G R+ITKR  FI
Sbjct: 545 GDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFI 602