BLASTX nr result

ID: Chrysanthemum22_contig00022284 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022284
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI02136.1| Zinc finger, B-box [Cynara cardunculus var. scoly...    59   1e-07

>gb|KVI02136.1| Zinc finger, B-box [Cynara cardunculus var. scolymus]
          Length = 301

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 31/49 (63%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = -3

Query: 383 SGLCWPKXXXXXXXHQIDTPAFVPDVSYSPMPNSYNSQQQ--TLKRRRH 243
           SGLCWPK        QID+ AFVPDV Y P+PN Y SQQ   TLKRRRH
Sbjct: 253 SGLCWPKDLPHHQH-QIDSAAFVPDVCYLPVPNFYGSQQNTGTLKRRRH 300


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