BLASTX nr result

ID: Chrysanthemum22_contig00022229 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00022229
         (664 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG14111.1| putative mitochodrial transcription termination f...    66   7e-09
ref|XP_021981452.1| transcription termination factor MTERF4, chl...    66   7e-09
gb|KVH97127.1| Mitochodrial transcription termination factor-rel...    61   3e-07
gb|PLY75142.1| hypothetical protein LSAT_4X41901 [Lactuca sativa]      58   3e-06
ref|XP_023732163.1| transcription termination factor MTERF4, chl...    58   3e-06
gb|KVH97130.1| Mitochodrial transcription termination factor-rel...    58   3e-06

>gb|OTG14111.1| putative mitochodrial transcription termination factor [Helianthus
           annuus]
          Length = 461

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 35/48 (72%), Positives = 37/48 (77%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPGNSQMVXXXXXXXXXEILYRRTVSL 519
           YADY+ETE +GPSFVMGGKLDLPGN QMV         EILYRRTVSL
Sbjct: 415 YADYIETEIQGPSFVMGGKLDLPGN-QMVSDDEDESDDEILYRRTVSL 461


>ref|XP_021981452.1| transcription termination factor MTERF4, chloroplastic [Helianthus
           annuus]
          Length = 519

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 35/48 (72%), Positives = 37/48 (77%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPGNSQMVXXXXXXXXXEILYRRTVSL 519
           YADY+ETE +GPSFVMGGKLDLPGN QMV         EILYRRTVSL
Sbjct: 473 YADYIETEIQGPSFVMGGKLDLPGN-QMVSDDEDESDDEILYRRTVSL 519


>gb|KVH97127.1| Mitochodrial transcription termination factor-related protein
           [Cynara cardunculus var. scolymus]
          Length = 504

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 33/49 (67%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPG-NSQMVXXXXXXXXXEILYRRTVSL 519
           YADY+ETE EGPSFVMGGKL+LPG ++QMV         E LYRRTVSL
Sbjct: 456 YADYIETEIEGPSFVMGGKLELPGDHNQMVSDEEEESDDEKLYRRTVSL 504


>gb|PLY75142.1| hypothetical protein LSAT_4X41901 [Lactuca sativa]
          Length = 442

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPGNSQMVXXXXXXXXXEILYRRTVSL 519
           Y DYVE E+EGP FVMGGKL+LPGN ++V         EILYRRTVSL
Sbjct: 396 YGDYVEMESEGPMFVMGGKLELPGN-EVVCDEEDESDDEILYRRTVSL 442


>ref|XP_023732163.1| transcription termination factor MTERF4, chloroplastic [Lactuca
           sativa]
          Length = 509

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 31/48 (64%), Positives = 35/48 (72%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPGNSQMVXXXXXXXXXEILYRRTVSL 519
           Y DYVE E+EGP FVMGGKL+LPGN ++V         EILYRRTVSL
Sbjct: 463 YGDYVEMESEGPMFVMGGKLELPGN-EVVCDEEDESDDEILYRRTVSL 509


>gb|KVH97130.1| Mitochodrial transcription termination factor-related protein
           [Cynara cardunculus var. scolymus]
          Length = 348

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/49 (65%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = -3

Query: 662 YADYVETETEGPSFVMGGKLDLPG-NSQMVXXXXXXXXXEILYRRTVSL 519
           YADY+ETE EGPSFVMGGKL+L G + QMV         E LYRRTVSL
Sbjct: 300 YADYIETEIEGPSFVMGGKLELSGDHDQMVSDEEDESDDEKLYRRTVSL 348


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