BLASTX nr result
ID: Chrysanthemum22_contig00022046
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Chrysanthemum22_contig00022046 (632 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KVI01913.1| Histone deacetylase superfamily [Cynara carduncul... 67 2e-10 ref|XP_022028029.1| histone deacetylase 6 [Helianthus annuus] >g... 63 6e-09 ref|XP_023771909.1| histone deacetylase 6 [Lactuca sativa] >gi|1... 56 3e-06 >gb|KVI01913.1| Histone deacetylase superfamily [Cynara cardunculus var. scolymus] Length = 164 Score = 67.0 bits (162), Expect = 2e-10 Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = -1 Query: 146 MADKQKTVCDXXXXSTHDQSKLDEEQE-ALLAIYGSEPGWVEARTHCDH 3 M DK+KTVCD + DQSK++EE+E AL+A+YGSE GWVEAR HCDH Sbjct: 1 MGDKEKTVCDSSSS-SRDQSKVEEEEEEALMALYGSESGWVEARIHCDH 48 >ref|XP_022028029.1| histone deacetylase 6 [Helianthus annuus] gb|OTG30940.1| putative histone deacetylase, Zinc finger, UBP-type, Zinc finger, RING/FYVE/PHD-type [Helianthus annuus] Length = 160 Score = 63.2 bits (152), Expect = 6e-09 Identities = 30/48 (62%), Positives = 37/48 (77%) Frame = -1 Query: 146 MADKQKTVCDXXXXSTHDQSKLDEEQEALLAIYGSEPGWVEARTHCDH 3 MADK+K VCD +HDQSK +E+ L+A+YGS+ GWVEARTHCDH Sbjct: 1 MADKEKKVCDSSS--SHDQSKQEED---LMALYGSDSGWVEARTHCDH 43 >ref|XP_023771909.1| histone deacetylase 6 [Lactuca sativa] gb|PLY79241.1| hypothetical protein LSAT_9X112460 [Lactuca sativa] Length = 166 Score = 55.8 bits (133), Expect = 3e-06 Identities = 29/48 (60%), Positives = 33/48 (68%) Frame = -1 Query: 146 MADKQKTVCDXXXXSTHDQSKLDEEQEALLAIYGSEPGWVEARTHCDH 3 MADK+K V D + DQS + EE L+A YGSE GWVEARTHCDH Sbjct: 1 MADKEKMVYDSSSS-SRDQSNVGEED--LMAFYGSESGWVEARTHCDH 45