BLASTX nr result

ID: Chrysanthemum22_contig00021869 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021869
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021983553.1| probable carbohydrate esterase At4g34215 [He...    57   1e-09
ref|XP_023757394.1| probable carbohydrate esterase At4g34215 iso...    53   3e-09
ref|XP_023757395.1| probable carbohydrate esterase At4g34215 iso...    53   2e-07

>ref|XP_021983553.1| probable carbohydrate esterase At4g34215 [Helianthus annuus]
 gb|OTG16070.1| putative SGNH hydrolase-type esterase domain-containing protein
           [Helianthus annuus]
          Length = 295

 Score = 56.6 bits (135), Expect(3) = 1e-09
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = +1

Query: 22  VGGLLWCDEKSDTLTRVGAKLCTWRS*RFFDHVRSDLALPTLPIVQ 159
           V GLLW   +SDT+TR  A+    RS RFFDHVR DL LPTLPI+Q
Sbjct: 159 VKGLLWYQGESDTVTREDAESYKRRSERFFDHVRLDLQLPTLPIIQ 204



 Score = 32.3 bits (72), Expect(3) = 1e-09
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 147 AYSSGTFTGRVSMGRLGMWQMNLLTVDATG 236
           A  +G++  +V   +LGMW +NL TVDA G
Sbjct: 208 ASGAGSYVEKVREAQLGMWLVNLRTVDAKG 237



 Score = 20.8 bits (42), Expect(3) = 1e-09
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 233 GLLLEPDRLHL 265
           GL LEPD LHL
Sbjct: 237 GLGLEPDGLHL 247


>ref|XP_023757394.1| probable carbohydrate esterase At4g34215 isoform X1 [Lactuca
           sativa]
 gb|PLY90227.1| hypothetical protein LSAT_4X128621 [Lactuca sativa]
          Length = 288

 Score = 53.1 bits (126), Expect(3) = 3e-09
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +1

Query: 22  VGGLLWCDEKSDTLTRVGAKLCTWRS*RFFDHVRSDLALPTLPIVQ 159
           + GLLW   +SDT+ R  A+L   R  RFFDHVR DL LP LPI+Q
Sbjct: 149 IKGLLWYQGESDTVNREDAELYQRRLERFFDHVRHDLVLPALPIIQ 194



 Score = 30.0 bits (66), Expect(3) = 3e-09
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 147 AYSSGTFTGRVSMGRLGMWQMNLLTVDATG 236
           A  +G +  RV   +LG W +NL TVDA G
Sbjct: 198 ASGAGPYIERVREAQLGTWLVNLRTVDAMG 227



 Score = 25.0 bits (53), Expect(3) = 3e-09
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 233 GLLLEPDRLHLKMLSYKGLLTRLQKISRKEWRETLLAQ 346
           GL LEPDRLHL   S   L   L +   ++    +++Q
Sbjct: 227 GLRLEPDRLHLTTTSQVTLGEMLAQAFPRDHPSPIISQ 264


>ref|XP_023757395.1| probable carbohydrate esterase At4g34215 isoform X2 [Lactuca
           sativa]
          Length = 224

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +1

Query: 22  VGGLLWCDEKSDTLTRVGAKLCTWRS*RFFDHVRSDLALPTLPIVQ 159
           + GLLW   +SDT+ R  A+L   R  RFFDHVR DL LP LPI+Q
Sbjct: 149 IKGLLWYQGESDTVNREDAELYQRRLERFFDHVRHDLVLPALPIIQ 194



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 158 RDFHRQSKHGSVRNVANEF 214
           R  HR+ K GSVRNVA EF
Sbjct: 203 RAIHRKGKRGSVRNVAREF 221


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