BLASTX nr result

ID: Chrysanthemum22_contig00021808 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021808
         (361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023740465.1| ylmG homolog protein 2, chloroplastic [Lactu...    67   1e-10
gb|PLY68693.1| hypothetical protein LSAT_7X58320 [Lactuca sativa]      67   2e-10
ref|XP_023732754.1| ylmG homolog protein 2, chloroplastic-like [...    64   9e-10
ref|XP_021989334.1| ylmG homolog protein 2, chloroplastic [Helia...    64   1e-09
gb|KVH87814.1| hypothetical protein Ccrd_024874, partial [Cynara...    64   2e-09

>ref|XP_023740465.1| ylmG homolog protein 2, chloroplastic [Lactuca sativa]
          Length = 281

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
 Frame = +3

Query: 21  KPTKIDXXXXXXXXXXXXFFKP---ISTN-HSNQKPIPNIQTLLTQTSHDIVSRIHDTVQ 188
           K TK+D            FFK    I+T  H N  PI N+Q ++T +    V   H+++ 
Sbjct: 34  KLTKLDLPLSILSPSSLLFFKSPSLITTQLHPNTNPILNLQKIVTASPDSFVRNFHNSID 93

Query: 189 ECVGVVQKLALRNEFFSKVYH---EYHNFCQIXXXXXXXXXXXXXXXFAAVLPGDSLAGL 359
           +C+      A  N  F+K++    +YH FCQI               FAA+LPGDSLAGL
Sbjct: 94  KCLRDFHHFASNNPLFTKLHSAASQYHKFCQINFRSDMKSNNLSNHNFAAILPGDSLAGL 153


>gb|PLY68693.1| hypothetical protein LSAT_7X58320 [Lactuca sativa]
          Length = 388

 Score = 66.6 bits (161), Expect = 2e-10
 Identities = 41/120 (34%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
 Frame = +3

Query: 21  KPTKIDXXXXXXXXXXXXFFKP---ISTN-HSNQKPIPNIQTLLTQTSHDIVSRIHDTVQ 188
           K TK+D            FFK    I+T  H N  PI N+Q ++T +    V   H+++ 
Sbjct: 34  KLTKLDLPLSILSPSSLLFFKSPSLITTQLHPNTNPILNLQKIVTASPDSFVRNFHNSID 93

Query: 189 ECVGVVQKLALRNEFFSKVYH---EYHNFCQIXXXXXXXXXXXXXXXFAAVLPGDSLAGL 359
           +C+      A  N  F+K++    +YH FCQI               FAA+LPGDSLAGL
Sbjct: 94  KCLRDFHHFASNNPLFTKLHSAASQYHKFCQINFRSDMKSNNLSNHNFAAILPGDSLAGL 153


>ref|XP_023732754.1| ylmG homolog protein 2, chloroplastic-like [Lactuca sativa]
 gb|PLY74661.1| hypothetical protein LSAT_5X79481 [Lactuca sativa]
          Length = 266

 Score = 64.3 bits (155), Expect = 9e-10
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
 Frame = +3

Query: 84  PISTNHS---------NQKPIPNIQTLLTQTSHDIVSRIHDTVQECVGVVQKLALRNEFF 236
           P+ST H+         +   I ++Q L+T++S++++  +H+++ +C+  +   A  N  F
Sbjct: 33  PLSTLHTPSLLFFKSTSPTTITHLQKLVTESSNNLIHNLHNSIDKCLNFLHLFASENPLF 92

Query: 237 SKVYH---EYHNFCQIXXXXXXXXXXXXXXXFAAVLPGDSLAGL 359
           +K+     EYHNFCQI               FAA++PGDS+AGL
Sbjct: 93  AKLQSLSSEYHNFCQINRRNQRNLKSVWNHDFAAIIPGDSVAGL 136


>ref|XP_021989334.1| ylmG homolog protein 2, chloroplastic [Helianthus annuus]
 gb|OTG12028.1| putative YGGT family protein [Helianthus annuus]
          Length = 257

 Score = 63.9 bits (154), Expect = 1e-09
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
 Frame = +3

Query: 84  PISTNHSNQ----KPIPNIQTLLTQTSHDIVSRIHDTVQECVGVVQKLALRNEFFSKVY- 248
           P+ST H++     KP  + Q L+T++S  ++  I +++ +C   +   A +N  F+K+  
Sbjct: 27  PLSTLHTSSLSFFKPTNHFQKLVTESSTTLICNIQNSIDKCFTSLHLFASQNPLFTKLQS 86

Query: 249 --HEYHNFCQIXXXXXXXXXXXXXXXFAAVLPGDSLAGL 359
             +EYHNFCQI               FAA++PGDS+AGL
Sbjct: 87  LCNEYHNFCQINYRNLRNQRSISNHDFAAIIPGDSVAGL 125


>gb|KVH87814.1| hypothetical protein Ccrd_024874, partial [Cynara cardunculus var.
           scolymus]
          Length = 275

 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 32/95 (33%), Positives = 52/95 (54%)
 Frame = +3

Query: 75  FFKPISTNHSNQKPIPNIQTLLTQTSHDIVSRIHDTVQECVGVVQKLALRNEFFSKVYHE 254
           FFK  +TNH         Q ++T++S+ ++  + +++ +C+  +Q     N  F+K + E
Sbjct: 65  FFKSTTTNH--------FQRIVTESSNTLIRNLRNSIHKCLNFLQ-----NPLFTKWHSE 111

Query: 255 YHNFCQIXXXXXXXXXXXXXXXFAAVLPGDSLAGL 359
           YHNFCQI               FAA++PGDS+AGL
Sbjct: 112 YHNFCQINCRKQRNLKSLSNHDFAAIIPGDSVAGL 146


Top