BLASTX nr result

ID: Chrysanthemum22_contig00021617 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021617
         (669 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021983352.1| uncharacterized protein LOC110879240 [Helian...    76   7e-13
ref|XP_023753596.1| uncharacterized protein LOC111901955 [Lactuc...    76   9e-13
gb|PLY99209.1| hypothetical protein LSAT_4X180001 [Lactuca sativa]     76   1e-12
gb|KVH92734.1| hypothetical protein Ccrd_005223 [Cynara carduncu...    74   9e-12
gb|KVI02525.1| Actin cross-linking [Cynara cardunculus var. scol...    57   8e-06

>ref|XP_021983352.1| uncharacterized protein LOC110879240 [Helianthus annuus]
 gb|OTG15914.1| Protein of unknown function (DUF569) [Helianthus annuus]
          Length = 278

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 41/66 (62%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -2

Query: 191 GSDHN---AKNDGRMIYYKLVDDDGNVVDAEGSFLFKGNNVXXXXXXXXXXXXXXNITVC 21
           GSD N    KN+GRMIYYKL DDDG VVDAEGSFLFKG  V              NITVC
Sbjct: 181 GSDQNFGSGKNEGRMIYYKLADDDGVVVDAEGSFLFKGKTVEDLTQNLEEETELENITVC 240

Query: 20  SINPLN 3
           S+NPLN
Sbjct: 241 SVNPLN 246


>ref|XP_023753596.1| uncharacterized protein LOC111901955 [Lactuca sativa]
          Length = 279

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 37/59 (62%), Positives = 41/59 (69%)
 Frame = -2

Query: 179 NAKNDGRMIYYKLVDDDGNVVDAEGSFLFKGNNVXXXXXXXXXXXXXXNITVCSINPLN 3
           N+KN+GRMIYYKLVDDDG + DAEGSFLFKGN +              NITVCS NPLN
Sbjct: 186 NSKNEGRMIYYKLVDDDGEIYDAEGSFLFKGNTIEDLTQNLEEETELENITVCSRNPLN 244


>gb|PLY99209.1| hypothetical protein LSAT_4X180001 [Lactuca sativa]
          Length = 292

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/59 (62%), Positives = 41/59 (69%)
 Frame = -2

Query: 179 NAKNDGRMIYYKLVDDDGNVVDAEGSFLFKGNNVXXXXXXXXXXXXXXNITVCSINPLN 3
           N+KN+GRMIYYKLVDDDG + DAEGSFLFKGN +              NITVCS NPLN
Sbjct: 186 NSKNEGRMIYYKLVDDDGEIYDAEGSFLFKGNTIEDLTQNLEEETELENITVCSRNPLN 244


>gb|KVH92734.1| hypothetical protein Ccrd_005223 [Cynara cardunculus var. scolymus]
          Length = 517

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = -2

Query: 185 DHNAKNDGRMIYYKLVDDDGNVVDAEGSFLFKGNNVXXXXXXXXXXXXXXNITVCSINPL 6
           + N+KN+GRMIYYK+VDDDG +VDAEGSFLFKGN +              NITVCS +PL
Sbjct: 420 ESNSKNEGRMIYYKMVDDDGEIVDAEGSFLFKGNCIQELTQNLEEETELENITVCSRSPL 479

Query: 5   N 3
           N
Sbjct: 480 N 480


>gb|KVI02525.1| Actin cross-linking [Cynara cardunculus var. scolymus]
          Length = 749

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 28/62 (45%), Positives = 36/62 (58%)
 Frame = -2

Query: 188 SDHNAKNDGRMIYYKLVDDDGNVVDAEGSFLFKGNNVXXXXXXXXXXXXXXNITVCSINP 9
           ++ NAK +GRMIYY + DDDG+V D E  F FKG+ +              +I VCS NP
Sbjct: 589 TETNAKTEGRMIYYTIADDDGHVADEERWFAFKGHGLDDLTRNLEEQTEFDDIIVCSRNP 648

Query: 8   LN 3
           LN
Sbjct: 649 LN 650


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