BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021566
         (695 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca...    71   2e-11
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...    70   4e-10
emb|CBI35069.3| unnamed protein product, partial [Vitis vinifera]      70   4e-10
gb|PNX82087.1| DNA-directed RNA polymerase iii subunit rpc2-like...    65   4e-10
gb|PHT63355.1| DNA-directed RNA polymerase III subunit RPC2, par...    69   6e-10
gb|PHU06006.1| DNA-directed RNA polymerase III subunit RPC2 [Cap...    69   7e-10
gb|PHT37095.1| DNA-directed RNA polymerase III subunit RPC2 [Cap...    69   7e-10
ref|XP_021832455.1| DNA-directed RNA polymerase III subunit 2-li...    64   8e-10
gb|PHT63381.1| hypothetical protein T459_32745 [Capsicum annuum]       65   8e-10
gb|OMO89727.1| RNA polymerase, beta subunit, protrusion [Corchor...    66   1e-09
ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [O...    68   2e-09
ref|XP_021832464.1| DNA-directed RNA polymerase III subunit 2-li...    65   2e-09
dbj|GAV62442.1| RNA_pol_Rpb2_1 domain-containing protein [Cephal...    65   3e-09
gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Mor...    67   3e-09
ref|XP_024024074.1| DNA-directed RNA polymerase III subunit 2 [M...    67   3e-09
ref|XP_015056027.1| PREDICTED: DNA-directed RNA polymerase III s...    67   3e-09
ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III s...    67   3e-09
gb|PHT43436.1| DNA-directed RNA polymerase III subunit RPC2 [Cap...    65   3e-09
ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [S...    67   4e-09
gb|PIN14066.1| RNA polymerase III, second largest subunit [Handr...    67   4e-09

>gb|KVH97879.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var.
           scolymus]
          Length = 198

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHL+SFNYFVKT+IKKIVR N  V+SR+DPS+YLR
Sbjct: 44  KVRGLVKQHLESFNYFVKTEIKKIVRANDLVTSRYDPSVYLR 85


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Vitis
           vinifera]
 ref|XP_010659065.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Vitis
           vinifera]
          Length = 1157

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 15/86 (17%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR---------------*NN 217
           ++RGLVKQHLDSFNYFVKTDIKKIVR N  + S  DPSIYLR                + 
Sbjct: 48  KVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPSIYLRFKDVRIGEPSITVDGISE 107

Query: 216 SISYLSCIF*SITYMLIILL*VKYLT 139
            ++  +C    +TY   IL+ ++Y+T
Sbjct: 108 KLNPHTCRLSDMTYAAPILVNIEYIT 133


>emb|CBI35069.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1309

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 15/86 (17%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR---------------*NN 217
           ++RGLVKQHLDSFNYFVKTDIKKIVR N  + S  DPSIYLR                + 
Sbjct: 48  KVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPSIYLRFKDVRIGEPSITVDGISE 107

Query: 216 SISYLSCIF*SITYMLIILL*VKYLT 139
            ++  +C    +TY   IL+ ++Y+T
Sbjct: 108 KLNPHTCRLSDMTYAAPILVNIEYIT 133


>gb|PNX82087.1| DNA-directed RNA polymerase iii subunit rpc2-like protein, partial
           [Trifolium pratense]
          Length = 100

 Score = 65.1 bits (157), Expect = 4e-10
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFVKTDIKKIVR N  + + + P IYLR
Sbjct: 28  KVRGLVKQHLDSFNYFVKTDIKKIVRANDRIQATYYPHIYLR 69


>gb|PHT63355.1| DNA-directed RNA polymerase III subunit RPC2, partial [Capsicum
           annuum]
          Length = 724

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           +V    ++RGLVKQHLDSFNYFVKT+IKKIVR N  + S  DPSIYLR
Sbjct: 36  LVPEFLKVRGLVKQHLDSFNYFVKTEIKKIVRANQEIRSTLDPSIYLR 83


>gb|PHU06006.1| DNA-directed RNA polymerase III subunit RPC2 [Capsicum chinense]
          Length = 1153

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           +V    ++RGLVKQHLDSFNYFVKT+IKKIVR N  + S  DPSIYLR
Sbjct: 36  LVPEFLKVRGLVKQHLDSFNYFVKTEIKKIVRANQEIRSTLDPSIYLR 83


>gb|PHT37095.1| DNA-directed RNA polymerase III subunit RPC2 [Capsicum baccatum]
          Length = 1352

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 33/48 (68%), Positives = 38/48 (79%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           +V    ++RGLVKQHLDSFNYFVKT+IKKIVR N  + S  DPSIYLR
Sbjct: 235 LVPEFLKVRGLVKQHLDSFNYFVKTEIKKIVRANQEIRSTLDPSIYLR 282


>ref|XP_021832455.1| DNA-directed RNA polymerase III subunit 2-like [Prunus avium]
          Length = 101

 Score = 64.3 bits (155), Expect = 8e-10
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV T IKKIVR N  + S  DPSIYLR
Sbjct: 54  KVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVDPSIYLR 95


>gb|PHT63381.1| hypothetical protein T459_32745 [Capsicum annuum]
          Length = 116

 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFVKT+IKKIVR N  + S  DP+I+LR
Sbjct: 44  KVRGLVKQHLDSFNYFVKTEIKKIVRANNEIRSTRDPNIFLR 85


>gb|OMO89727.1| RNA polymerase, beta subunit, protrusion [Corchorus olitorius]
          Length = 211

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -3

Query: 360 RLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           + Q +RGLVKQHLDSFNYFV T IKKIVR NA + S  DPSI+LR
Sbjct: 39  KYQLVRGLVKQHLDSFNYFVNTGIKKIVRANAMIVSDVDPSIFLR 83


>ref|XP_022895778.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
 ref|XP_022895779.1| DNA-directed RNA polymerase III subunit 2 [Olea europaea var.
           sylvestris]
          Length = 1154

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV+T IK+IVR N  ++SR DPSIYLR
Sbjct: 45  KVRGLVKQHLDSFNYFVRTQIKQIVRANDLITSRIDPSIYLR 86


>ref|XP_021832464.1| DNA-directed RNA polymerase III subunit 2-like [Prunus avium]
          Length = 153

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV T IKKIVR N  + S  DPSIYLR
Sbjct: 81  KVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGIDPSIYLR 122


>dbj|GAV62442.1| RNA_pol_Rpb2_1 domain-containing protein [Cephalotus follicularis]
          Length = 175

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYF+ T IKKIVR N  + S  DPSIYLR
Sbjct: 84  KVRGLVKQHLDSFNYFINTGIKKIVRANDRIVSSIDPSIYLR 125


>gb|EXB83245.1| DNA-directed RNA polymerase III subunit RPC2 [Morus notabilis]
          Length = 786

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV T+IKKIVR+N+ + S  DPSIYLR
Sbjct: 91  KVRGLVKQHLDSFNYFVNTEIKKIVRSNSRIVSSVDPSIYLR 132


>ref|XP_024024074.1| DNA-directed RNA polymerase III subunit 2 [Morus notabilis]
 ref|XP_024024075.1| DNA-directed RNA polymerase III subunit 2 [Morus notabilis]
          Length = 1152

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV T+IKKIVR+N+ + S  DPSIYLR
Sbjct: 44  KVRGLVKQHLDSFNYFVNTEIKKIVRSNSRIVSSVDPSIYLR 85


>ref|XP_015056027.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Solanum
           pennellii]
 ref|XP_015056028.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Solanum
           pennellii]
          Length = 1153

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR*NN-SISYLSCI 193
           +V    ++RGLVKQHLDSFNYFV+T+IKKIVR N  + S  DP+IYLR  +  I   S +
Sbjct: 36  LVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSTLDPNIYLRYRDVHIGEPSMV 95

Query: 192 F*SITYML 169
           F ++T  L
Sbjct: 96  FDAVTEKL 103


>ref|XP_010312066.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Solanum
           lycopersicum]
 ref|XP_010312067.1| PREDICTED: DNA-directed RNA polymerase III subunit 2 [Solanum
           lycopersicum]
          Length = 1153

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR*NN-SISYLSCI 193
           +V    ++RGLVKQHLDSFNYFV+T+IKKIVR N  + S  DP+IYLR  +  I   S +
Sbjct: 36  LVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSTLDPNIYLRYRDVHIGEPSMV 95

Query: 192 F*SITYML 169
           F ++T  L
Sbjct: 96  FDAVTEKL 103


>gb|PHT43436.1| DNA-directed RNA polymerase III subunit RPC2 [Capsicum baccatum]
          Length = 183

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 15/92 (16%)
 Frame = -3

Query: 369 IVLRLQQLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR*NN--------- 217
           ++L   ++R LVKQHLDSFNYFVKT+IKKIVR +  + S  DP++YLR  +         
Sbjct: 38  LILEFLKVRELVKQHLDSFNYFVKTEIKKIVRADNEIRSTRDPNVYLRYRDVRIGEPSMI 97

Query: 216 ------SISYLSCIF*SITYMLIILL*VKYLT 139
                  +S   C   S+TY+  I + V Y T
Sbjct: 98  YDGVTEKLSPQKCRLSSLTYVAPIYVTVDYTT 129


>ref|XP_011085923.1| DNA-directed RNA polymerase III subunit 2 [Sesamum indicum]
          Length = 1152

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV+T IKKIV+ N  ++S+ DPSIYLR
Sbjct: 44  KVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSKIDPSIYLR 85


>gb|PIN14066.1| RNA polymerase III, second largest subunit [Handroanthus
           impetiginosus]
          Length = 1153

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 30/42 (71%), Positives = 37/42 (88%)
 Frame = -3

Query: 351 QLRGLVKQHLDSFNYFVKTDIKKIVRTNATVSSRFDPSIYLR 226
           ++RGLVKQHLDSFNYFV+T IKKIV+ N  ++SR DP+IYLR
Sbjct: 45  KVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSRIDPNIYLR 86