BLASTX nr result

ID: Chrysanthemum22_contig00021372 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021372
         (569 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05320.1| S-layer homology domain-containing protein [Cynar...    47   2e-07
ref|XP_023751595.1| uncharacterized protein LOC111899947 [Lactuc...    48   7e-07
emb|CDP00562.1| unnamed protein product [Coffea canephora]             46   9e-06

>gb|KVI05320.1| S-layer homology domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 586

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +1

Query: 94  MEARKLSSEVLPGLCIDTLTDNKSSTRTVSGQVKLFQPRKPAQR 225
           ++AR L S+VLPGL +D L ++KS  R V GQ K FQP KP  +
Sbjct: 349 LDARDLKSDVLPGLFMDMLANDKSIMRKVFGQGKRFQPGKPCTK 392



 Score = 35.8 bits (81), Expect(2) = 2e-07
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 5   DLIGWRVK*EDEVMPGLTQEVAINYSSF 88
           DLIGWR K E EVMPG+ +E+  N   F
Sbjct: 321 DLIGWRAKLEYEVMPGVNEEILRNKIGF 348


>ref|XP_023751595.1| uncharacterized protein LOC111899947 [Lactuca sativa]
 gb|PLY94735.1| hypothetical protein LSAT_8X37461 [Lactuca sativa]
          Length = 571

 Score = 48.1 bits (113), Expect(2) = 7e-07
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 94  MEARKLSSEVLPGLCIDTLTDNKSSTRTVSGQVKLFQPRKPAQR 225
           ++AR+L S+VLP L +D + D+KS  R V GQVK FQP KP  +
Sbjct: 335 LDARELKSDVLPPLFMDMMADDKSIMRKVFGQVKRFQPGKPCTK 378



 Score = 32.7 bits (73), Expect(2) = 7e-07
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +2

Query: 5   DLIGWRVK*EDEVMPGLTQEVAINYSSF 88
           DLIGWR K E +VM GL +E+  N   F
Sbjct: 307 DLIGWRAKLEYQVMAGLNEEILRNKIGF 334


>emb|CDP00562.1| unnamed protein product [Coffea canephora]
          Length = 585

 Score = 46.2 bits (108), Expect(2) = 9e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +1

Query: 94  MEARKLSSEVLPGLCIDTLTDNKSSTRTVSGQVKLFQPRKPAQR 225
           ++ R +SSE +  L +D L D KS  R V GQ+K FQPRKP+ +
Sbjct: 344 LDVRDISSEAIVDLAMDILADEKSILRRVFGQIKRFQPRKPSTK 387



 Score = 30.8 bits (68), Expect(2) = 9e-06
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 5   DLIGWRVK*EDEVMPGLTQEVA 70
           DLI W+ K E EV+PGL +E++
Sbjct: 316 DLISWKAKLEYEVIPGLNEEIS 337


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