BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021350
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10192.1| RNA polymerase sigma-70 [Cynara cardunculus var. ...   220   1e-66
ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplas...   205   8e-61
ref|XP_021974221.1| RNA polymerase sigma factor sigE, chloroplas...   187   3e-54
ref|XP_017246839.1| PREDICTED: RNA polymerase sigma factor sigE,...   143   2e-37
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   143   2e-37
gb|KZM98108.1| hypothetical protein DCAR_014530 [Daucus carota s...   143   1e-36
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,...   129   3e-32
ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,...   127   1e-31
ref|XP_015070569.1| PREDICTED: RNA polymerase sigma factor sigE,...   127   2e-31
ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplas...   127   3e-31
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,...   127   3e-31
gb|PNT09190.1| hypothetical protein POPTR_012G031100v3 [Populus ...   121   5e-31
gb|PNT09188.1| hypothetical protein POPTR_012G031100v3 [Populus ...   121   5e-31
ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplas...   125   1e-30
ref|XP_018809720.1| PREDICTED: RNA polymerase sigma factor sigE,...   121   2e-30
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   124   3e-30
gb|AKC88754.1| sigma factor [Pelargonium fulgidum]                    124   3e-30
ref|XP_011651413.1| PREDICTED: RNA polymerase sigma factor sigE,...   124   3e-30
gb|PNT09192.1| hypothetical protein POPTR_012G031100v3 [Populus ...   121   4e-30
gb|PNT09189.1| hypothetical protein POPTR_012G031100v3 [Populus ...   121   4e-30

>gb|KVI10192.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
          Length = 518

 Score =  220 bits (560), Expect = 1e-66
 Identities = 118/158 (74%), Positives = 133/158 (84%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTPFGLSARFS    PTKR TILAFKTDKTKNTALVSS +SANLSV+TSK+N KR+RR
Sbjct: 10  AARTPFGLSARFSTHSSPTKRTTILAFKTDKTKNTALVSSKESANLSVNTSKENPKRIRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQV-KKVR 118
           +KKPSERVQA+STAEAP CSLDLDYNEAAAELDR+YKLSP TI+SDT EDH  QV K+ R
Sbjct: 70  NKKPSERVQALSTAEAPSCSLDLDYNEAAAELDRIYKLSPTTIESDT-EDHDDQVIKRGR 128

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           RGR+K  D +EK  +R  VDIVR +HK+  RL+LE RI
Sbjct: 129 RGRRKISDANEKPESRTAVDIVRGQHKRLQRLSLEKRI 166


>ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Lactuca sativa]
 ref|XP_023761457.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Lactuca sativa]
 gb|PLY87284.1| hypothetical protein LSAT_4X164620 [Lactuca sativa]
          Length = 515

 Score =  205 bits (521), Expect = 8e-61
 Identities = 118/160 (73%), Positives = 127/160 (79%), Gaps = 2/160 (1%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTP GLSARFS+   P KR +ILAFKTDK KNT LVSS +SANLSVD SK+N KRLRR
Sbjct: 10  AARTPLGLSARFSSHQSPFKRKSILAFKTDKPKNTTLVSSKESANLSVDKSKENPKRLRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPA--TIDSDTDEDHVSQVKKV 121
           SKKPSERVQA+ST EAP CSLDLDYNEAAAELDRLYKLSP+  TIDSDT+ DH   VKK 
Sbjct: 70  SKKPSERVQALSTVEAPSCSLDLDYNEAAAELDRLYKLSPSPTTIDSDTN-DH---VKKT 125

Query: 120 RRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRIH 1
            R +KKN DT+EK     TVDIVR  HKK  RLTLE RIH
Sbjct: 126 PRRKKKNFDTNEK-LKNTTVDIVRGHHKKLQRLTLEKRIH 164


>ref|XP_021974221.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Helianthus annuus]
 gb|OTG21659.1| putative sigma factor E [Helianthus annuus]
          Length = 506

 Score =  187 bits (476), Expect = 3e-54
 Identities = 105/159 (66%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRAT-ILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLR 298
           AARTPFGL+ RF   P PTK +  +LAFKTDKTKNT LVSS +SANLSVDT K++ KR R
Sbjct: 10  AARTPFGLTTRFPPHPSPTKTSIMVLAFKTDKTKNTTLVSSKESANLSVDTPKESPKRHR 69

Query: 297 RSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVR 118
           RSKK SERVQA+STAEAPYCSLDLDY EAAAEL+R+YKLSPATI+SDT++       +V 
Sbjct: 70  RSKKSSERVQALSTAEAPYCSLDLDYLEAAAELNRIYKLSPATIESDTEDCD----SEVT 125

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRIH 1
           RGRKK  + S+K       D+VR +HK+  RLTLENRIH
Sbjct: 126 RGRKKISEISKKP------DVVRGRHKRFPRLTLENRIH 158


>ref|XP_017246839.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Daucus carota subsp.
           sativus]
 ref|XP_017246840.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Daucus carota subsp.
           sativus]
          Length = 517

 Score =  143 bits (361), Expect = 2e-37
 Identities = 81/158 (51%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTP G S R S    PTKR +I  FKTDKTKN ALV+  D+ + +++ SK   K LR+
Sbjct: 10  AARTPLGSSTRLSKYSFPTKRTSISMFKTDKTKNKALVAPKDAVSSAIEKSKGKRKILRQ 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPA-TIDSDTDEDHVSQVKKVR 118
           SKKP ERVQA S AEAP C LDLDY EAAA+L+ +YKLSPA  +    DEDH    K +R
Sbjct: 70  SKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKLSPAPEVYDGQDEDH--GAKTIR 127

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           + RKK  + +EK   +   ++VRS+     R++LE RI
Sbjct: 128 KRRKKKIEENEKKEDKRINNVVRSQKTGLRRMSLEKRI 165


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Vitis vinifera]
 emb|CBI22546.3| unnamed protein product, partial [Vitis vinifera]
          Length = 518

 Score =  143 bits (361), Expect = 2e-37
 Identities = 79/157 (50%), Positives = 107/157 (68%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTPFGL+A+FSN   P +R  +LAFK DK KN ALV+  +   L ++TSK + KRLRR
Sbjct: 12  ASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRR 71

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           + KPS+RV+AVST E   CS++LDYNEAAA+L+ +YKLSPAT D    ED    V++ R+
Sbjct: 72  ASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPAT-DVSEAEDLERVVRRGRQ 130

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            RK+     +K     + ++VR  +KK  RL+LE RI
Sbjct: 131 RRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRI 167


>gb|KZM98108.1| hypothetical protein DCAR_014530 [Daucus carota subsp. sativus]
          Length = 877

 Score =  143 bits (361), Expect = 1e-36
 Identities = 81/158 (51%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTP G S R S    PTKR +I  FKTDKTKN ALV+  D+ + +++ SK   K LR+
Sbjct: 370 AARTPLGSSTRLSKYSFPTKRTSISMFKTDKTKNKALVAPKDAVSSAIEKSKGKRKILRQ 429

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPA-TIDSDTDEDHVSQVKKVR 118
           SKKP ERVQA S AEAP C LDLDY EAAA+L+ +YKLSPA  +    DEDH    K +R
Sbjct: 430 SKKPLERVQAFSVAEAPSCPLDLDYYEAAAKLENIYKLSPAPEVYDGQDEDH--GAKTIR 487

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           + RKK  + +EK   +   ++VRS+     R++LE RI
Sbjct: 488 KRRKKKIEENEKKEDKRINNVVRSQKTGLRRMSLEKRI 525


>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  129 bits (325), Expect = 3e-32
 Identities = 73/158 (46%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           +++TP GLS+RFS      KR  ILAFKTDK K+ ALV+  +   L +DT K+N KRLRR
Sbjct: 10  SSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDTPKENQKRLRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDE-DHVSQVKKVR 118
           + KPS+RV+ V + EA  C++++DYN+ AA+L+ +YKLSP T  SD D+ D V   ++ R
Sbjct: 70  ATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDTDRVG--RRRR 127

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           R RKK  +   KT    + +++R+ H K  RL+L+ RI
Sbjct: 128 RTRKKLGEADRKTGKESSDNVIRN-HNKNKRLSLDRRI 164


>ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Cucumis melo]
          Length = 511

 Score =  127 bits (320), Expect = 1e-31
 Identities = 75/157 (47%), Positives = 104/157 (66%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTPF LSA+FSN     KR +I+AFK DK  NT LVS  +   L V+++ ++ KR   
Sbjct: 10  AARTPFRLSAKFSNHGSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRSKKRSGN 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           + KP +RV+AV   EA  CSLDLDYNEAAA+L+ ++KLSP T DSD +    S+  + +R
Sbjct: 70  TSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDME----SKDGRSKR 125

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           G+++    S+K+  RP+  IVR+K K+  RL L+ RI
Sbjct: 126 GQQR----SKKSDKRPSDGIVRNKTKRIKRLDLDKRI 158


>ref|XP_015070569.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial isoform X2 [Solanum
           pennellii]
          Length = 487

 Score =  127 bits (318), Expect = 2e-31
 Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+R+P GLS+RFS    P KR  I++FK DKTKNT LVS  +S +L ++TSK+N KR RR
Sbjct: 10  ASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETSKENEKRSRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-EDHVSQVKKVR 118
             K +ERV AV T EAP  +L+LDY+EAAA+L+ +YK S  T   +T+ +DH+  VK+  
Sbjct: 70  VTKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHL--VKRRP 126

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           R RK+  ++ E+       ++V+++ KK  RL L+ RI
Sbjct: 127 RTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRI 164


>ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
 ref|XP_022890335.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 513

 Score =  127 bits (318), Expect = 3e-31
 Identities = 74/157 (47%), Positives = 99/157 (63%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTP GLS +FS      KR  I++FKTD TKNTAL++  +S  L V+T+K+N KRLR 
Sbjct: 10  AARTPLGLSTKFSAHLSQQKRPVIISFKTDITKNTALIAPRESVCLPVETAKENEKRLRT 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
            KK SERV A  T EA   + DLDYNEAAA+L+ ++K SP      +D++   Q+ K RR
Sbjct: 70  VKKRSERVHAALTDEAISSTFDLDYNEAAAKLEHIFKRSP------SDKEVKDQMVKRRR 123

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            R+K  +  E+        +VR++ KK  RL+LE RI
Sbjct: 124 WRRKRGEAEEEGGKGSANTVVRNRRKKAKRLSLETRI 160


>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial isoform X1 [Solanum
           pennellii]
          Length = 516

 Score =  127 bits (318), Expect = 3e-31
 Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+R+P GLS+RFS    P KR  I++FK DKTKNT LVS  +S +L ++TSK+N KR RR
Sbjct: 10  ASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETSKENEKRSRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-EDHVSQVKKVR 118
             K +ERV AV T EAP  +L+LDY+EAAA+L+ +YK S  T   +T+ +DH+  VK+  
Sbjct: 70  VTKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHL--VKRRP 126

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           R RK+  ++ E+       ++V+++ KK  RL L+ RI
Sbjct: 127 RTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRI 164


>gb|PNT09190.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
          Length = 258

 Score =  121 bits (304), Expect = 5e-31
 Identities = 72/157 (45%), Positives = 103/157 (65%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTP GLS +FS      KR  I+AFK DK+ NT+LV+  +   L V+T+ K  KRL +
Sbjct: 10  ASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT-KGKKRLGK 68

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           SKK S R++AV T  +P C+L +DYNEAAA+L+ +YKLSP T  SD  ED    +++ R+
Sbjct: 69  SKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDASGVIRRGRQ 126

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            ++K  +  ++T  R +  IVR++ KK  RL+LE RI
Sbjct: 127 RKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRI 163


>gb|PNT09188.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
          Length = 261

 Score =  121 bits (304), Expect = 5e-31
 Identities = 72/157 (45%), Positives = 103/157 (65%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTP GLS +FS      KR  I+AFK DK+ NT+LV+  +   L V+T+ K  KRL +
Sbjct: 10  ASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT-KGKKRLGK 68

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           SKK S R++AV T  +P C+L +DYNEAAA+L+ +YKLSP T  SD  ED    +++ R+
Sbjct: 69  SKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDASGVIRRGRQ 126

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            ++K  +  ++T  R +  IVR++ KK  RL+LE RI
Sbjct: 127 RKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRI 163


>ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Sesamum indicum]
          Length = 518

 Score =  125 bits (314), Expect = 1e-30
 Identities = 75/157 (47%), Positives = 97/157 (61%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTP GL AR+       +R  IL+FK DK KN AL++  +S  L ++  K+  KR R+
Sbjct: 10  AARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAKKEKEKRSRK 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
            KK  ERV AVST EA   ++DLDYNEAAA+L+ +YK SPAT  S   E+   Q  K RR
Sbjct: 70  VKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVS--LEEVKDQRVKRRR 127

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
             +K    +E+   +   D+VRSK KK+ RLTLE RI
Sbjct: 128 PLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRI 164


>ref|XP_018809720.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Juglans regia]
          Length = 309

 Score =  121 bits (303), Expect = 2e-30
 Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTP GL  +FS+     KR  I+AFK DK+  TALV+S +   L ++T K + KRL +
Sbjct: 37  ASRTPVGLGTKFSSQRSTLKRPLIVAFKADKSNTTALVTSQEQIPLPIETGKDHQKRLGK 96

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           + K   RV+AV T EA  C+L++DYNEAAA+L+ LYKL+PA  D+  +E+    V+K+R 
Sbjct: 97  ANKKLRRVKAVLTDEASPCALEVDYNEAAAKLENLYKLTPAA-DASNEENIDGMVRKIRG 155

Query: 114 GRKKNPDTSEKTATRPTVD-IVRSKHKKKHRLTLENRI 4
            R+K     EK   +   D +++++  K  RL+L+ RI
Sbjct: 156 RRRKTTGVDEKLVEKKASDNVIKNQTDKVKRLSLDKRI 193


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Solanum tuberosum]
          Length = 516

 Score =  124 bits (311), Expect = 3e-30
 Identities = 71/158 (44%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+R+P GLS+RFS    P KR  I++FK DKTKNT L++  +S +LS++TSK+N KR RR
Sbjct: 10  ASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRR 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTD-EDHVSQVKKVR 118
             K SERV AV+   +P  +L+LDY+EAAA+L+ +YK S  T  S+T+ +DH+  VK+  
Sbjct: 70  VSKRSERVHAVAIEASP-STLELDYSEAAAKLESIYKRSLETASSNTEVQDHL--VKRRP 126

Query: 117 RGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           R RK+  +  E+       ++V+++ K   RL L+ RI
Sbjct: 127 RTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRI 164


>gb|AKC88754.1| sigma factor [Pelargonium fulgidum]
          Length = 517

 Score =  124 bits (311), Expect = 3e-30
 Identities = 77/161 (47%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSST--DSANLSVDTSKKNTKRL 301
           AAR+P GLS +FS   +  KR+T++AFK DK K  ALV+    +   L ++T K+  KRL
Sbjct: 10  AARSPLGLSIQFSTERVRFKRSTVVAFKEDKPKKVALVALEPHEQIPLPIETPKRQQKRL 69

Query: 300 RRSKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDE--DHVSQVK 127
            R+ K S+RV+AVS   +P C+ ++DYNEAAA+L+ +YKLSPA ID+  DE  D  +  K
Sbjct: 70  GRATKASKRVKAVSVEASP-CTSEVDYNEAAAKLENIYKLSPA-IDTSEDEAIDGATTRK 127

Query: 126 KVRRGRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           ++RR RK N D SE +  R T ++VR++ KK  RLTL+ RI
Sbjct: 128 RLRRRRKVNGDDSE-SEKRTTDNVVRNRVKKIKRLTLDERI 167


>ref|XP_011651413.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Cucumis sativus]
 gb|KGN57856.1| hypothetical protein Csa_3G354500 [Cucumis sativus]
          Length = 547

 Score =  124 bits (311), Expect = 3e-30
 Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           AARTPF L  +FSN     KR +I+AFK DK  NT LVS  +   L V+++ +  KR   
Sbjct: 10  AARTPFRLGVKFSNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESNNRRKKRSGN 69

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           + KP +RV+AV   EA  CSLDLDYNEAAA+L+ ++KLSP T DSD         K+ + 
Sbjct: 70  TSKPLKRVKAVLIDEATPCSLDLDYNEAAAKLENIFKLSPMTEDSD---------KECKD 120

Query: 114 GR-KKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
           GR K+    S+K+A RP   IVR++ K+  RL L+ RI
Sbjct: 121 GRSKRGQKRSKKSANRPGDGIVRNQTKRIKRLDLDKRI 158


>gb|PNT09192.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
          Length = 362

 Score =  121 bits (304), Expect = 4e-30
 Identities = 72/157 (45%), Positives = 103/157 (65%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTP GLS +FS      KR  I+AFK DK+ NT+LV+  +   L V+T+ K  KRL +
Sbjct: 10  ASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT-KGKKRLGK 68

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           SKK S R++AV T  +P C+L +DYNEAAA+L+ +YKLSP T  SD  ED    +++ R+
Sbjct: 69  SKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDASGVIRRGRQ 126

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            ++K  +  ++T  R +  IVR++ KK  RL+LE RI
Sbjct: 127 RKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRI 163


>gb|PNT09189.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
 gb|PNT09191.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
          Length = 367

 Score =  121 bits (304), Expect = 4e-30
 Identities = 72/157 (45%), Positives = 103/157 (65%)
 Frame = -1

Query: 474 AARTPFGLSARFSNLPIPTKRATILAFKTDKTKNTALVSSTDSANLSVDTSKKNTKRLRR 295
           A+RTP GLS +FS      KR  I+AFK DK+ NT+LV+  +   L V+T+ K  KRL +
Sbjct: 10  ASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETT-KGKKRLGK 68

Query: 294 SKKPSERVQAVSTAEAPYCSLDLDYNEAAAELDRLYKLSPATIDSDTDEDHVSQVKKVRR 115
           SKK S R++AV T  +P C+L +DYNEAAA+L+ +YKLSP T  SD  ED    +++ R+
Sbjct: 69  SKKSSNRLKAVRTEVSP-CTLLVDYNEAAAKLENIYKLSPGTDTSDV-EDASGVIRRGRQ 126

Query: 114 GRKKNPDTSEKTATRPTVDIVRSKHKKKHRLTLENRI 4
            ++K  +  ++T  R +  IVR++ KK  RL+LE RI
Sbjct: 127 RKRKISEGDKETEDRTSKIIVRNRAKKAKRLSLEKRI 163