BLASTX nr result

ID: Chrysanthemum22_contig00021237 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00021237
         (392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021989786.1| isoleucine--tRNA ligase, cytoplasmic [Helian...    57   9e-07
ref|XP_023756283.1| isoleucine--tRNA ligase, cytoplasmic-like, p...    54   2e-06
gb|PLY91069.1| hypothetical protein LSAT_5X76161 [Lactuca sativa]      54   3e-06

>ref|XP_021989786.1| isoleucine--tRNA ligase, cytoplasmic [Helianthus annuus]
 gb|OTG12511.1| putative tRNA synthetase class I (I, L, M and V) family protein
            [Helianthus annuus]
          Length = 1177

 Score = 57.0 bits (136), Expect = 9e-07
 Identities = 27/45 (60%), Positives = 36/45 (80%)
 Frame = +3

Query: 12   LPTHNINVVITEETYKNMSSYDFKITLRRSVLAFNENAILELYSG 146
            +P H   V+I EETYKN+S+ DF+ITL R+ L FNENAI++LY+G
Sbjct: 1071 IPKHA--VIIAEETYKNISNSDFQITLSRAALVFNENAIVDLYAG 1113


>ref|XP_023756283.1| isoleucine--tRNA ligase, cytoplasmic-like, partial [Lactuca sativa]
          Length = 174

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 12  LPTHNINVVITEETYKNMSSYDFKITLRRSVLAFNENAILELYSGFAR 155
           +P H   VVI E+TY+N+S+ DF+ITL R  L FN+ AIL+LYSG A+
Sbjct: 66  IPEHA--VVIAEKTYRNISNCDFEITLTRQTLTFNDKAILDLYSGNAK 111


>gb|PLY91069.1| hypothetical protein LSAT_5X76161 [Lactuca sativa]
          Length = 196

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +3

Query: 12  LPTHNINVVITEETYKNMSSYDFKITLRRSVLAFNENAILELYSGFAR 155
           +P H   VVI E+TY+N+S+ DF+ITL R  L FN+ AIL+LYSG A+
Sbjct: 88  IPEHA--VVIAEKTYRNISNCDFEITLTRQTLTFNDKAILDLYSGNAK 133


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