BLASTX nr result

ID: Chrysanthemum22_contig00020614 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00020614
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO65295.1| DNA helicase PIF1, ATP-dependent [Corchorus olito...    59   3e-07
ref|XP_010490026.1| PREDICTED: uncharacterized protein LOC104767...    57   1e-06
gb|OMP11561.1| DNA helicase PIF1, ATP-dependent [Corchorus olito...    55   4e-06
ref|XP_018461981.1| PREDICTED: uncharacterized protein LOC108833...    55   4e-06
gb|OMP06331.1| DNA helicase PIF1, ATP-dependent [Corchorus olito...    55   4e-06
ref|XP_010495644.1| PREDICTED: uncharacterized protein LOC104772...    55   7e-06
ref|XP_010507505.1| PREDICTED: uncharacterized protein LOC104784...    54   8e-06
gb|PNY08785.1| helicase-like protein, partial [Trifolium pratense]     54   1e-05

>gb|OMO65295.1| DNA helicase PIF1, ATP-dependent [Corchorus olitorius]
          Length = 1099

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           DK+ DP GY  V  LMMHGPCG +KP APCMEGG
Sbjct: 392 DKDLDPIGYEAVTSLMMHGPCGPSKPRAPCMEGG 425


>ref|XP_010490026.1| PREDICTED: uncharacterized protein LOC104767743 [Camelina sativa]
          Length = 773

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           DKE DP GY +V   MMHGPCGN +P++PCME G
Sbjct: 410 DKEEDPEGYSLVQQHMMHGPCGNDRPASPCMENG 443


>gb|OMP11561.1| DNA helicase PIF1, ATP-dependent [Corchorus olitorius]
          Length = 842

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 24/33 (72%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEG 6
           DK+ DP GY  V  LMMHGPCG A P APCMEG
Sbjct: 166 DKDLDPIGYEAVTSLMMHGPCGPANPRAPCMEG 198


>ref|XP_018461981.1| PREDICTED: uncharacterized protein LOC108833025 [Raphanus sativus]
          Length = 1465

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = -2

Query: 128 EILGHK*SDKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           +I+  +  DKE+DP GY +V   MMHGPCG  +PS+PCME G
Sbjct: 521 KIISAELPDKETDPEGYCLVEQHMMHGPCGKDRPSSPCMENG 562


>gb|OMP06331.1| DNA helicase PIF1, ATP-dependent [Corchorus olitorius]
          Length = 1572

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           D++ DP GY  V  LMMHGPCG A P APCMEGG
Sbjct: 641 DQDRDPLGYDAVTSLMMHGPCGLANPRAPCMEGG 674


>ref|XP_010495644.1| PREDICTED: uncharacterized protein LOC104772765 [Camelina sativa]
          Length = 531

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           DKE DP  Y ++++ M+HGPCG+A PS+PCME G
Sbjct: 42  DKEKDPEFYNIISECMIHGPCGSANPSSPCMEEG 75


>ref|XP_010507505.1| PREDICTED: uncharacterized protein LOC104784139 [Camelina sativa]
          Length = 348

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = -2

Query: 104 DKESDPHGYRVVADLMMHGPCGNAKPSAPCMEGG 3
           DKE DP  Y ++++ M+HGPCG+A PS+PCME G
Sbjct: 23  DKEKDPELYNIISECMIHGPCGSANPSSPCMEEG 56


>gb|PNY08785.1| helicase-like protein, partial [Trifolium pratense]
          Length = 1341

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
 Frame = -2

Query: 392 AHNLPVVHNLPYAQSANHICEQ-QQKHPAGQTIHHPLNVKPRKFSTRDEPHSRLSPILQY 216
           AH+ P +    +    N + +   +KH  G+ + +   ++   F  R  PH+ L   L  
Sbjct: 560 AHDRPDIVTRVFKVKFNELLKDLTKKHVLGKVVAYMYTIE---FQKRGLPHAHLLIFLHS 616

Query: 215 G*RSKRVPNDLFXXXXXXXXXXXQFTA*KEILGHK*SDKESDPHGYRVVADLMMHGPCGN 36
             +    PND+                  +I+  +  DKES+P  Y +V   MMHGPCG 
Sbjct: 617 SCKYP-TPNDI-----------------NKIISAEIPDKESEPELYNLVKSHMMHGPCGQ 658

Query: 35  AKPSAPCMEGG 3
            K S+PCM+ G
Sbjct: 659 GKESSPCMQNG 669


Top