BLASTX nr result

ID: Chrysanthemum22_contig00020319 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00020319
         (722 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06019.1| Zinc finger, CCCH-type [Cynara cardunculus var. s...   166   2e-47
ref|XP_023760445.1| zinc finger CCCH domain-containing protein 3...   150   3e-41
ref|XP_022016275.1| mRNA decay factor CTH2-like [Helianthus annu...   142   6e-39
gb|PLY88021.1| hypothetical protein LSAT_4X105901 [Lactuca sativa]    120   6e-31
ref|XP_022890199.1| zinc finger CCCH domain-containing protein 3...   101   4e-22
ref|XP_012856210.1| PREDICTED: zinc finger CCCH domain-containin...    97   2e-20
ref|XP_020572641.1| zinc finger CCCH domain-containing protein 3...    94   2e-19
ref|XP_009143673.1| PREDICTED: zinc finger CCCH domain-containin...    92   8e-19
ref|XP_020692914.1| zinc finger CCCH domain-containing protein 3...    92   1e-18
ref|XP_009770534.1| PREDICTED: zinc finger CCCH domain-containin...    92   1e-18
emb|CDY31688.1| BnaA05g08590D [Brassica napus]                         92   1e-18
ref|XP_020692913.1| zinc finger CCCH domain-containing protein 3...    92   2e-18
ref|XP_009620360.1| PREDICTED: zinc finger CCCH domain-containin...    92   2e-18
ref|XP_019243857.1| PREDICTED: zinc finger CCCH domain-containin...    91   4e-18
ref|XP_019150142.1| PREDICTED: zinc finger CCCH domain-containin...    90   7e-18
ref|XP_013634611.1| PREDICTED: zinc finger CCCH domain-containin...    90   7e-18
ref|XP_013637293.1| PREDICTED: zinc finger CCCH domain-containin...    89   2e-17
ref|XP_018514785.1| PREDICTED: zinc finger CCCH domain-containin...    89   3e-17
ref|XP_020884541.1| zinc finger CCCH domain-containing protein 2...    87   2e-16
ref|XP_021627806.1| zinc finger CCCH domain-containing protein 3...    84   9e-16

>gb|KVI06019.1| Zinc finger, CCCH-type [Cynara cardunculus var. scolymus]
          Length = 229

 Score =  166 bits (419), Expect = 2e-47
 Identities = 85/210 (40%), Positives = 122/210 (58%), Gaps = 53/210 (25%)
 Frame = +3

Query: 75  NQQPHPKRP---KTEICKRFQRGICVYGEKCCFIHTS----------------------- 176
           + +P P R    KTE C RF+RG   +G++CCF+H +                       
Sbjct: 11  SSEPLPNRRTQCKTEPCLRFRRGTYDHGDRCCFVHGNGDLRTVDGRNELIGADESSRVKH 70

Query: 177 ------------TKPCWRFMNGETCQYGDTCHFSHGLKTSRASVAVNVMN---GDELREC 311
                       TK CWRFMNGE CQ+GD CHF+H ++T R SVA++++N     ++++ 
Sbjct: 71  WDENQNPRCSDKTKLCWRFMNGEKCQFGDRCHFNH-IRTERKSVAISIVNVAGNGQMQQH 129

Query: 312 KKT-WKTRLCHKWMASGTCRYGTTCSYAHGVSELQNQGSSE-----------WLVKTCEE 455
           K+T WKTRLC++WM++G+C +G  C +AHG SELQ +GS++           W+  TCE+
Sbjct: 130 KQTPWKTRLCNRWMSTGSCAFGLKCCFAHGESELQKRGSNDAQDYADGEPCKWVDMTCEK 189

Query: 456 SVDGKGWAFKLKNGGKISRVYADWIDDDTL 545
            VDGK W FK K+  KI R+YADWI+D +L
Sbjct: 190 KVDGKRWEFKWKDVEKIGRIYADWINDTSL 219


>ref|XP_023760445.1| zinc finger CCCH domain-containing protein 39-like [Lactuca sativa]
          Length = 225

 Score =  150 bits (378), Expect = 3e-41
 Identities = 80/201 (39%), Positives = 110/201 (54%), Gaps = 46/201 (22%)
 Frame = +3

Query: 81  QPHPKRP---KTEICKRFQRGICVYGEKCCFIH--------------------------- 170
           +P P R    KTE+C RFQRG C Y ++CCF H                           
Sbjct: 16  EPMPNRRTQYKTELCLRFQRGTCDYADRCCFAHGYGHLSGFDKWQELTALDGASRIKYLD 75

Query: 171 --------TSTKPCWRFMNGETCQYGDTCHFSHGLKTSRASVAVNVMN---GDELRECKK 317
                     ++ CWR MNG+ CQ+GD CHF+H +KT R S  ++V+N     E+++ KK
Sbjct: 76  ENQNPKCSDRSRLCWRVMNGDKCQFGDKCHFNH-IKTERESAVISVLNVAGRSEMQQQKK 134

Query: 318 T-WKTRLCHKWMASGTCRYGTTCSYAHGVSELQNQGSSEWLV----KTCEESVDGKGWAF 482
           T W+T+LC++WM++G+C YG  C +AHG SEL+ Q S++         C++ +DGK   F
Sbjct: 135 TPWRTKLCNRWMSTGSCPYGFKCCFAHGESELRKQRSNDVQAYAENAPCDKKIDGKQREF 194

Query: 483 KLKNGGKISRVYADWIDDDTL 545
           K KN  KI RVYADWI D  L
Sbjct: 195 KWKNVEKIGRVYADWITDTPL 215


>ref|XP_022016275.1| mRNA decay factor CTH2-like [Helianthus annuus]
 gb|OTF90522.1| putative zinc finger, CCCH-type [Helianthus annuus]
          Length = 185

 Score =  142 bits (359), Expect = 6e-39
 Identities = 75/184 (40%), Positives = 100/184 (54%), Gaps = 32/184 (17%)
 Frame = +3

Query: 81  QPHPKRPKTEICKRFQRGICVYGEKCCFIH--------------------------TSTK 182
           QP P   KTE+C +FQRG C YG++CCF H                          ++ +
Sbjct: 10  QPSPNH-KTELCSQFQRGSCGYGDRCCFAHDIQELKGFQKPQQVIAVDEDKKVVSNSNPR 68

Query: 183 PCWRFMNGETCQYGDTCHFSHGLKTSRASVAVNVMNGDELRECKKTWKTRLCHKWMASGT 362
            CWRFMNGE CQYGD CHF H           NV+           W+T+LC +WM +G 
Sbjct: 69  LCWRFMNGEKCQYGDKCHFIHV-----RDEGTNVL----------LWRTKLCKRWMENGR 113

Query: 363 CRYGTTCSYAHGVSELQNQGSSEW----LVKTCEESVDGKGWAFKL--KNGGKISRVYAD 524
           C+YG  C +AHG SELQNQG +++    L K  +++++G G   K+  K+  KISRVYAD
Sbjct: 114 CKYGRNCCFAHGESELQNQGLNDYVEAGLFKMADKNMEGNGKRLKVKWKSNEKISRVYAD 173

Query: 525 WIDD 536
           WI+D
Sbjct: 174 WIND 177


>gb|PLY88021.1| hypothetical protein LSAT_4X105901 [Lactuca sativa]
          Length = 133

 Score =  120 bits (301), Expect = 6e-31
 Identities = 59/124 (47%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
 Frame = +3

Query: 198 MNGETCQYGDTCHFSHGLKTSRASVAVNVMN---GDELRECKKT-WKTRLCHKWMASGTC 365
           MNG+ CQ+GD CHF+H +KT R S  ++V+N     E+++ KKT W+T+LC++WM++G+C
Sbjct: 1   MNGDKCQFGDKCHFNH-IKTERESAVISVLNVAGRSEMQQQKKTPWRTKLCNRWMSTGSC 59

Query: 366 RYGTTCSYAHGVSELQNQGSSEWLV----KTCEESVDGKGWAFKLKNGGKISRVYADWID 533
            YG  C +AHG SEL+ Q S++         C++ +DGK   FK KN  KI RVYADWI 
Sbjct: 60  PYGFKCCFAHGESELRKQRSNDVQAYAENAPCDKKIDGKQREFKWKNVEKIGRVYADWIT 119

Query: 534 DDTL 545
           D  L
Sbjct: 120 DTPL 123


>ref|XP_022890199.1| zinc finger CCCH domain-containing protein 39-like [Olea europaea
           var. sylvestris]
          Length = 259

 Score =  101 bits (251), Expect = 4e-22
 Identities = 66/198 (33%), Positives = 91/198 (45%), Gaps = 54/198 (27%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCCFIHTST----------------------KPCWRFMNGETC 215
           K+E+C  FQRG C YG+ C + H+ +                      K C++F +G+ C
Sbjct: 62  KSELCILFQRGKCYYGDNCHYAHSMSDIRNQSFNGPANGYQRNTMNKWKKCFKFSSGKGC 121

Query: 216 QYGDTCHFSHG-LKTSRASVAVNVMNGDELRECKKT-----------WKTRLCHKWMASG 359
            YGD C F H  +   R S A++++NG +  ECK              K +LC+KW   G
Sbjct: 122 PYGDKCQFLHERVGEYRESSAISIVNGADQIECKSLNAGQEYKRLNFRKMKLCNKWEKFG 181

Query: 360 TCRYGTTCSYAHGVSELQNQG-------------------SSEWLVKTCEE-SVDGKGWA 479
           +C YG  C YAHG +ELQ  G                   SS+   KT  E  + GK   
Sbjct: 182 SCPYGVNCVYAHGQAELQRSGCITELECANASNAKAVAMQSSDSEQKTARELRLQGKR-C 240

Query: 480 FKLKNGGKISRVYADWID 533
           F   N  KI+R+YADWI+
Sbjct: 241 FTKWNVEKINRIYADWIE 258


>ref|XP_012856210.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Erythranthe guttata]
 gb|EYU21612.1| hypothetical protein MIMGU_mgv1a012258mg [Erythranthe guttata]
          Length = 256

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 65/203 (32%), Positives = 84/203 (41%), Gaps = 58/203 (28%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCCFIHTST---------------------------------- 179
           K+EIC  FQRG C YG+ C F HT+T                                  
Sbjct: 41  KSEICSLFQRGKCYYGDNCHFSHTTTVIRNLGFQSVAAAAVEEHLNNEEEDDSRRNSVYE 100

Query: 180 -KPCWRFMNGETCQYGDTCHFSHGLKTS-RASVAVNVMNGDELRECKKT-WKTRLCHKWM 350
            K C  F  G  C +GD C F H ++    +   +   N +    C K+ WKT+LC KW+
Sbjct: 101 SKVCRWFSGGAVCPFGDRCSFLHVIEERVHSDHEIRCWNFNYGVNCDKSVWKTKLCMKWL 160

Query: 351 ASGTCRYGTTCSYAHGVSELQNQGSSEWLVKTCEE-----------SVDGKGWAFKLKNG 497
             G C +G  CSYAHG  ELQ  G+   +   C             S  GK  A K++  
Sbjct: 161 RFGDCPFGLKCSYAHGREELQEAGAYAKMESRCTRFAGKRQNAASLSEVGKKIAKKMQLK 220

Query: 498 G----------KISRVYADWIDD 536
           G          K +R+YADWIDD
Sbjct: 221 GKRCLMEWKFKKTNRIYADWIDD 243


>ref|XP_020572641.1| zinc finger CCCH domain-containing protein 39-like [Phalaenopsis
           equestris]
          Length = 269

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 72/239 (30%), Positives = 88/239 (36%), Gaps = 82/239 (34%)
 Frame = +3

Query: 66  MSHNQQPHPKRP-----KTEICKRFQRGICVYGEKCCFIHT------------------- 173
           MS+     P +P     KT +C RF  G C  G  C F H+                   
Sbjct: 40  MSNPMCDFPGKPQSVYFKTRMCVRFTSGCCPKGSNCNFAHSIEELRRPVGNVDKRASFLQ 99

Query: 174 --------------------------STKPCWRFMNGETCQYGDTCHFSHGLKTSRASVA 275
                                       K CW+F NGE C YGD C FSH        V 
Sbjct: 100 KDRSSRNESNIIIPEVFDPREEQKLSKNKICWKFYNGEMCPYGDKCSFSH--------VG 151

Query: 276 VNVMNGDELRECKKT-WKTRLCHKWMASGTCRYGTTCSYAHGVSELQNQG---------- 422
              +  + L   K   WKT++CHKW+ SG C YG  CSYAHG +EL+             
Sbjct: 152 PGSLQDNPLFNQKSLCWKTKICHKWLTSGNCPYGDQCSYAHGDAELRKLAGDNNIELVEK 211

Query: 423 -------------SSEWLVKTCEESVD--------GKGWAFKLKNGGKISRVYADWIDD 536
                        S + L KT +E  D         K  A  L+   KISR+Y DWIDD
Sbjct: 212 NVLEAPPKCTSHLSDDILSKTMKEPEDRREIPASQPKVRALSLR---KISRIYGDWIDD 267


>ref|XP_009143673.1| PREDICTED: zinc finger CCCH domain-containing protein 28 isoform X2
           [Brassica rapa]
          Length = 259

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 62/182 (34%), Positives = 86/182 (47%), Gaps = 37/182 (20%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCC-FIHT-----------STKP-----CWRFMNGETCQYGDT 230
           KT++C  F+ G C Y    C F H+           S +P     C +F +GE C YG++
Sbjct: 76  KTKLCCNFRAGSCPYAASTCHFAHSAEELRRPTAGESVRPYKGRHCKKFYSGEGCPYGES 135

Query: 231 CHFSHG-LKTSRASVAVNVMN---GDELRECKK-TWKTRLCHKWMASGTCRYGTTCSYAH 395
           C F H     +R S AV++ +   G+ +       WKTR+C+KW  SG C +GT C +AH
Sbjct: 136 CTFLHDEASRNRESFAVSLGHRGGGNVIAAAASPNWKTRMCNKWEMSGYCPFGTNCRFAH 195

Query: 396 GVSELQNQG-----SSEWLVKT----------CEESVDGKGWAFKLKNGGKISRVYADWI 530
           G SEL   G       E  + T           + + +G     K K   +ISRVY DWI
Sbjct: 196 GASELHRFGGGLVEEEEGKIGTSSTLASPGVPSQRASNGVRVVRKWKGPDRISRVYGDWI 255

Query: 531 DD 536
           DD
Sbjct: 256 DD 257


>ref|XP_020692914.1| zinc finger CCCH domain-containing protein 39-like isoform X2
           [Dendrobium catenatum]
          Length = 263

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 65/218 (29%), Positives = 80/218 (36%), Gaps = 73/218 (33%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCCFIHT------------------------------------ 173
           KT +C +F  G C  G  C F H+                                    
Sbjct: 52  KTRMCVKFMSGSCSKGGSCNFAHSIEELRRPAGNVDVRALFPQVDGSRRNEQNPIISELF 111

Query: 174 ---------STKPCWRFMNGETCQYGDTCHFSHGLKTSRASVAVNVMNGDELRECKKT-W 323
                      K CW+F +GE C YGD C FSH        V    +    L   K   W
Sbjct: 112 DAREKQKLHRNKVCWKFYHGELCPYGDKCSFSH--------VQPGSLQDSSLPSQKPMCW 163

Query: 324 KTRLCHKWMASGTCRYGTTCSYAHGVSELQNQG----------------------SSEWL 437
           KT++CHKW  SG+C YG  CSYAHG SEL+  G                      + E L
Sbjct: 164 KTKICHKWSTSGSCSYGDQCSYAHGHSELRKLGGDNDELVEKNVVAARPKCAINITDEIL 223

Query: 438 VKTCEESVDGKGWA-----FKLKNGGKISRVYADWIDD 536
            KT  E  + +  A      +     KISR+Y DWIDD
Sbjct: 224 SKTTAEPRESREAAVSQPKIRTLTLKKISRIYGDWIDD 261


>ref|XP_009770534.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Nicotiana sylvestris]
 ref|XP_016470997.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Nicotiana tabacum]
          Length = 263

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 43/183 (23%)
 Frame = +3

Query: 114 CKRFQR-GICVYGEKCCFIH----------------TSTKPCWRFMNGETCQYGDTCHFS 242
           C +FQR G C YG +C + H                +  K C  F +G+ C YG+ CHF 
Sbjct: 72  CLQFQRWGSCRYGGECRYAHITGPLNGIRVGDQRNLSKPKSCHFFDSGKDCPYGNKCHFL 131

Query: 243 H--------GLKTSRASVAVNVM-NGDELREC----KKTWKTRLCHKWMASGTCRYGTTC 383
           H        G+   R S A+++  +G+E +      K   KT+ C  W  +G+C YG+ C
Sbjct: 132 HERSQKLEGGVGFCRVSSAISIATSGNEPKRSVELRKNLLKTKFCVNWERTGSCAYGSKC 191

Query: 384 SYAHGVSELQNQGSSEWLVKTCEESVDGKG-------------WAFKLKNGGKISRVYAD 524
            +AHG +ELQ  GSS  L     ES+   G             + FK  N  KISR+YAD
Sbjct: 192 QFAHGKAELQTLGSSNTL-----ESLGSAGICAPAKNAASECRFLFKWTNVQKISRIYAD 246

Query: 525 WID 533
           WI+
Sbjct: 247 WIE 249


>emb|CDY31688.1| BnaA05g08590D [Brassica napus]
          Length = 266

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 64/191 (33%), Positives = 88/191 (46%), Gaps = 46/191 (24%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCC-FIHT-----------STKP-----CWRFMNGETCQYGDT 230
           KT++C  F+ G C Y    C F H+           S +P     C +F +GE C YG++
Sbjct: 74  KTKLCCNFRAGSCPYAASTCHFAHSAEELRRPTAGESVRPYKGRHCKKFYSGEGCPYGES 133

Query: 231 CHFSHG-LKTSRASVAVNVMN---GDELRECKKTWKTRLCHKWMASGTCRYGTTCSYAHG 398
           C F H     +R S AV++ +   G+ +      WKTR+C+KW  SG C +GT C +AHG
Sbjct: 134 CTFLHDEASRNRESFAVSLGHRGGGNVVVAASPNWKTRICNKWEMSGYCPFGTNCRFAHG 193

Query: 399 VSELQNQG--------------SSEWLVKTCEESV-----------DGKGWAFKLKNGGK 503
            SEL   G              S+    KT + S+           +G     K K   +
Sbjct: 194 ASELHRFGGGLVEEEEGKIGTSSTLDTKKTGQYSLASPGVPSQRVSNGVRVVRKWKGPDR 253

Query: 504 ISRVYADWIDD 536
           ISRVY DWIDD
Sbjct: 254 ISRVYGDWIDD 264


>ref|XP_020692913.1| zinc finger CCCH domain-containing protein 39-like isoform X1
           [Dendrobium catenatum]
 gb|PKU64926.1| Zinc finger CCCH domain-containing protein 56 [Dendrobium
           catenatum]
          Length = 264

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 55/147 (37%), Positives = 67/147 (45%), Gaps = 28/147 (19%)
 Frame = +3

Query: 180 KPCWRFMNGETCQYGDTCHFSHGLKTSRASVAVNVMNGDELRECKKT-WKTRLCHKWMAS 356
           K CW+F +GE C YGD C FSH        V    +    L   K   WKT++CHKW  S
Sbjct: 124 KVCWKFYHGELCPYGDKCSFSH--------VQPGSLQDSSLPSQKPMCWKTKICHKWSTS 175

Query: 357 GTCRYGTTCSYAHGVSELQNQG----------------------SSEWLVKTCEESVDGK 470
           G+C YG  CSYAHG SEL+  G                      + E L KT  E  + +
Sbjct: 176 GSCSYGDQCSYAHGHSELRKLGGDNDELVEKNVVAARPKCAINITDEILSKTTAEPRESR 235

Query: 471 GWA-----FKLKNGGKISRVYADWIDD 536
             A      +     KISR+Y DWIDD
Sbjct: 236 EAAVSQPKIRTLTLKKISRIYGDWIDD 262


>ref|XP_009620360.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           isoform X1 [Nicotiana tomentosiformis]
 ref|XP_016459038.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           isoform X1 [Nicotiana tabacum]
          Length = 268

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 48/188 (25%)
 Frame = +3

Query: 114 CKRFQR-GICVYGEKCCFIH----------------TSTKPCWRFMNGETCQYGDTCHFS 242
           C +F+R G C YG++C + H                +  K C  F +G+ C YG+ CHF 
Sbjct: 72  CLQFKRWGSCSYGDECRYAHITGPLKGIRVEDQRNLSKVKSCHFFGSGKECPYGNKCHFL 131

Query: 243 H--------GLKTSRASVAVNVMN-GDELRECK---------KTWKTRLCHKWMASGTCR 368
           H        G+   R S A+++   G E+R            K  KTR C  W  +GTC 
Sbjct: 132 HERNQKPEGGVGFCRISSAISIATIGREVRNNTSSDAVDLRIKLLKTRFCINWERTGTCA 191

Query: 369 YGTTCSYAHGVSELQNQGSSEWLVKTCEESVDGKG-------------WAFKLKNGGKIS 509
           YG+ C +AHG +ELQ  GSS  L     ES+   G             + FK  N  KIS
Sbjct: 192 YGSKCQFAHGKAELQTLGSSNTL-----ESLGSAGICAPAKNAASECRFLFKWTNVQKIS 246

Query: 510 RVYADWID 533
           ++YADWI+
Sbjct: 247 QIYADWIE 254


>ref|XP_019243857.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
           [Nicotiana attenuata]
 gb|OIT05074.1| zinc finger ccch domain-containing protein 39 [Nicotiana attenuata]
          Length = 260

 Score = 90.5 bits (223), Expect = 4e-18
 Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 40/180 (22%)
 Frame = +3

Query: 114 CKRFQR-GICVYGEKCCFIH----------------TSTKPCWRFMNGETCQYGDTCHFS 242
           C +F+R G C YG +C + H                +  K C  F +G+ C YG+ CHF 
Sbjct: 69  CLQFKRWGSCSYGNECRYAHITGRLNGIRVEDQRNLSKPKSCHYFDSGKECPYGNKCHFL 128

Query: 243 H--------GLKTSRASVAVNVMNGDELRECKKT-------WKTRLCHKWMASGTCRYGT 377
           H        G+   R S A+++      RE K+T        KT+ C  W  +G+C YG+
Sbjct: 129 HERNQKLEGGVGFCRVSSAISIATSG--REHKRTVELRKELLKTKFCVNWERTGSCAYGS 186

Query: 378 TCSYAHGVSELQNQGSSEWLVKTCEESVDGKG--------WAFKLKNGGKISRVYADWID 533
            C +AHG +ELQ  GSS  L       +            + FK  N  KIS++YADWI+
Sbjct: 187 KCQFAHGKAELQTLGSSNTLEPLGTSGISAPAKTAASECRFLFKWTNVQKISQIYADWIE 246


>ref|XP_019150142.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Ipomoea nil]
          Length = 250

 Score = 89.7 bits (221), Expect = 7e-18
 Identities = 62/199 (31%), Positives = 82/199 (41%), Gaps = 55/199 (27%)
 Frame = +3

Query: 108 EICKRFQRGICVYGEKCCFIHT----------------------STKPCWRFMNGETCQY 221
           E C+RF RG C  GE C + H                           C  F+ G  C Y
Sbjct: 41  EACRRFSRGQCAKGELCRYAHVIGNVRGTEGERGHWAMSQRRTERVNFCQFFLGGLPCPY 100

Query: 222 GDTCHFSHGLKTS----------RASVAVNVMNGDELRECKK---------TW-KTRLCH 341
           G  C F H    +          R S A+ +   ++ R  K+          W KT+LC 
Sbjct: 101 GSKCRFLHEASGNQGDSSMCSEFRESSAICIATNNDERRSKRLNVRQNPNPVWAKTKLCL 160

Query: 342 KWMASGTCRYGTTCSYAHGVSELQNQGSSEWLVKTCEESVD-------------GKGWAF 482
            W   G+C YG+TC+YAHG +EL+N      L  +    VD             GK + F
Sbjct: 161 MWEKMGSCWYGSTCTYAHGNAELRNIDYPNPLDSSRGHDVDTASKNTESGTVQHGKQFLF 220

Query: 483 KLKNGGKISRVYADWIDDD 539
           K  +  K+S+VYADWIDDD
Sbjct: 221 KWTDVRKVSQVYADWIDDD 239


>ref|XP_013634611.1| PREDICTED: zinc finger CCCH domain-containing protein 28-like
           [Brassica oleracea var. oleracea]
          Length = 270

 Score = 90.1 bits (222), Expect = 7e-18
 Identities = 64/195 (32%), Positives = 87/195 (44%), Gaps = 50/195 (25%)
 Frame = +3

Query: 102 KTEICKRFQRGICVY-GEKCCFIHT-----------STKP-----CWRFMNGETCQYGDT 230
           KT++C  F+ G C Y    C F H+           S +P     C +F +GE C YG++
Sbjct: 74  KTKLCCNFRAGSCPYVASTCHFAHSAEELRRPTAGESVRPYKGRHCKKFNSGEGCPYGES 133

Query: 231 CHFSHG-LKTSRASVAVNVMN---GDELRECKKTWKTRLCHKWMASGTCRYGTTCSYAHG 398
           C F H     +R   AV++ +   G+ +      WKTR+C+KW  SG C +GT C +AHG
Sbjct: 134 CTFLHDEASRNREGFAVSLGHRGGGNVVAAASPNWKTRMCNKWEMSGYCPFGTNCRFAHG 193

Query: 399 VSELQNQG--------------SSEWLVKTCEESV---------------DGKGWAFKLK 491
            SEL   G              S+    KT + S+               +G     K K
Sbjct: 194 ASELHRFGGGLVEEEEGKIGTSSTLDTKKTGQASLASPGVRTSNAVTQKPNGVRVVRKWK 253

Query: 492 NGGKISRVYADWIDD 536
              KISRVY DWIDD
Sbjct: 254 GPDKISRVYGDWIDD 268


>ref|XP_013637293.1| PREDICTED: zinc finger CCCH domain-containing protein 28 [Brassica
           oleracea var. oleracea]
 ref|XP_013637294.1| PREDICTED: zinc finger CCCH domain-containing protein 28 [Brassica
           oleracea var. oleracea]
 ref|XP_013637295.1| PREDICTED: zinc finger CCCH domain-containing protein 28 [Brassica
           oleracea var. oleracea]
          Length = 270

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 63/195 (32%), Positives = 87/195 (44%), Gaps = 50/195 (25%)
 Frame = +3

Query: 102 KTEICKRFQRGICVY-GEKCCFIHT-----------STKP-----CWRFMNGETCQYGDT 230
           KT++C  F+ G C Y    C F H+           S +P     C +F +GE C YG++
Sbjct: 74  KTKLCCNFRAGSCPYVASTCHFAHSAEELRRPTAGESVRPYKGRHCKKFNSGEGCPYGES 133

Query: 231 CHFSHG-LKTSRASVAVNVMN---GDELRECKKTWKTRLCHKWMASGTCRYGTTCSYAHG 398
           C F H     +R   AV++ +   G+ +      WKTR+C+KW  SG C +GT C +AHG
Sbjct: 134 CTFLHDEASRNREGFAVSLGHRGGGNVVAAASPNWKTRMCNKWEMSGYCPFGTNCRFAHG 193

Query: 399 VSELQNQG--------------SSEWLVKTCEESV---------------DGKGWAFKLK 491
            SEL   G              S+    KT + S+               +G     K K
Sbjct: 194 ASELHRFGGGLVEEEEGKIGTSSTLDTKKTGQASLASPGVRTSNAVTQKPNGVRVVRKWK 253

Query: 492 NGGKISRVYADWIDD 536
              +ISRVY DWIDD
Sbjct: 254 GPDRISRVYGDWIDD 268


>ref|XP_018514785.1| PREDICTED: zinc finger CCCH domain-containing protein 28 isoform X1
           [Brassica rapa]
          Length = 269

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 62/192 (32%), Positives = 86/192 (44%), Gaps = 47/192 (24%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCC-FIHT-----------STKP-----CWRFMNGETCQYGDT 230
           KT++C  F+ G C Y    C F H+           S +P     C +F +GE C YG++
Sbjct: 76  KTKLCCNFRAGSCPYAASTCHFAHSAEELRRPTAGESVRPYKGRHCKKFYSGEGCPYGES 135

Query: 231 CHFSHG-LKTSRASVAVNVMN---GDELRECKK-TWKTRLCHKWMASGTCRYGTTCSYAH 395
           C F H     +R S AV++ +   G+ +       WKTR+C+KW  SG C +GT C +AH
Sbjct: 136 CTFLHDEASRNRESFAVSLGHRGGGNVIAAAASPNWKTRMCNKWEMSGYCPFGTNCRFAH 195

Query: 396 GVSELQNQG-----SSEWLVKT--------------------CEESVDGKGWAFKLKNGG 500
           G SEL   G       E  + T                     + + +G     K K   
Sbjct: 196 GASELHRFGGGLVEEEEGKIGTSSTLDTKKTGQYSLASPGVPSQRASNGVRVVRKWKGPD 255

Query: 501 KISRVYADWIDD 536
           +ISRVY DWIDD
Sbjct: 256 RISRVYGDWIDD 267


>ref|XP_020884541.1| zinc finger CCCH domain-containing protein 28 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 285

 Score = 86.7 bits (213), Expect = 2e-16
 Identities = 61/212 (28%), Positives = 85/212 (40%), Gaps = 67/212 (31%)
 Frame = +3

Query: 102 KTEICKRFQRGICVYGEKCC-FIHTST-----------------------KPCWRFMNGE 209
           KT++C +F+ G C Y    C F H+S                        + C +FM+GE
Sbjct: 72  KTKLCFKFRSGTCPYAANSCHFAHSSEELRRPPPPPNRQETAESGRLYKERHCKKFMSGE 131

Query: 210 TCQYGDTCHFSHG-LKTSRASVAVNVMN---GDELRECKK----TWKTRLCHKWMASGTC 365
            C YG++C F H     +R S A+++     GD     +      WKTR+C+KW  +G C
Sbjct: 132 GCPYGESCTFLHDEASRNRESFAISLGPRGYGDASNVAQTLKPPNWKTRICNKWETTGYC 191

Query: 366 RYGTTCSYAHGVSELQNQGS-----------------------------------SEWLV 440
            +GT C +AHG SEL   G                                    S+ + 
Sbjct: 192 PFGTNCHFAHGASELHRFGGGLVEEEGKIGTSTTPDTMQTGQGDTVTSLVSPGVPSQRIS 251

Query: 441 KTCEESVDGKGWAFKLKNGGKISRVYADWIDD 536
               +  +G     K K   KISRVY DWIDD
Sbjct: 252 SAVTQKPNGVRTQRKWKGPDKISRVYGDWIDD 283


>ref|XP_021627806.1| zinc finger CCCH domain-containing protein 39-like isoform X1
           [Manihot esculenta]
 gb|OAY36839.1| hypothetical protein MANES_11G052900 [Manihot esculenta]
          Length = 263

 Score = 84.3 bits (207), Expect = 9e-16
 Identities = 63/225 (28%), Positives = 90/225 (40%), Gaps = 63/225 (28%)
 Frame = +3

Query: 84  PHPKRP-----------KTEICKRFQRGICVYGEKCCFIH-----------------TST 179
           P+PK P           KT++C +F+ G C YG KC F H                   +
Sbjct: 35  PNPKMPVATSNAVTGSFKTQLCAKFRLGYCSYGYKCSFAHGIGELRKRLVNVQGPVVNQS 94

Query: 180 KPCWRFMNGETCQYGDTCHFSHGL------------KTSRASVAVNVMNGDE---LRECK 314
             C  F +   C YGD C F H              ++S   +     +G +       K
Sbjct: 95  NICRMFYSRNECTYGDRCRFLHVSPDNIKRDMGYCRESSSLRIGTTGFSGGQRSGFASSK 154

Query: 315 KTWKTRLCHKWMASGTCRYGTTCSYAHGVSELQNQ-------------------GSSEWL 437
              K R+C+KW  +G+C YG TC +AHG +EL+                       S+ +
Sbjct: 155 LAMKKRICNKWERTGSCPYGKTCCFAHGQAELEKPIGDVELASGLAPTNTSKALPISKSV 214

Query: 438 VKTCEE-SVDGKGWAFKLKNGGKISRVYADWIDDDTLDV*FHNAV 569
           V T  +  V G    FK +   KIS +YADWI+D  L    HN++
Sbjct: 215 VGTSYQLQVQGMKCTFKKRAIQKISGIYADWIEDMPL---LHNSL 256


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