BLASTX nr result

ID: Chrysanthemum22_contig00020223 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00020223
         (402 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022029464.1| uncharacterized protein LOC110930471 [Helian...    64   1e-09

>ref|XP_022029464.1| uncharacterized protein LOC110930471 [Helianthus annuus]
 gb|OTG32409.1| putative LRAT-like domain-containing protein [Helianthus annuus]
          Length = 254

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 33/68 (48%), Positives = 41/68 (60%)
 Frame = +3

Query: 9   NAPWKSTLTSAVAYSKRTLAVGKIMSNSFGMVSMAVTIGEYSWNRYKTDIGVRDDVEKVA 188
           NAPWK  L S +           + S + G +++ VT+G + WNRYKTDIGVRDDV KV 
Sbjct: 193 NAPWKPALVSVLPKV--------VCSTTMGALAVGVTVGTHYWNRYKTDIGVRDDVVKVK 244

Query: 189 VEQVLEFR 212
           VE V  FR
Sbjct: 245 VEDVGSFR 252


Top