BLASTX nr result

ID: Chrysanthemum22_contig00020120 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum22_contig00020120
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH89034.1| Sde2 N-terminal domain-containing protein, partia...   100   5e-22
ref|XP_021969684.1| protein SDE2 homolog [Helianthus annuus] >gi...    79   1e-14
ref|XP_023746397.1| replication stress response regulator SDE2 [...    64   4e-09

>gb|KVH89034.1| Sde2 N-terminal domain-containing protein, partial [Cynara
           cardunculus var. scolymus]
          Length = 495

 Score =  100 bits (249), Expect = 5e-22
 Identities = 57/92 (61%), Positives = 66/92 (71%)
 Frame = -1

Query: 278 KVVDASVGHEESIVNNVIDNSTVSFEMEKLTKPELSDSEEKQSEPPISSNVQEVETTDVE 99
           + VDASV HEE I+ N  + STV  E+EK  KPEL D EE++SE P +SNVQE  TTD E
Sbjct: 349 EAVDASVIHEEIILKNS-NESTVPIEIEKSAKPELGDLEERESELPRASNVQEDGTTDEE 407

Query: 98  ANSSDAKEVINEEKVSTNSNCPELEKPLNFDE 3
           A  SD K VI+EEKVST + CP LEK LNFDE
Sbjct: 408 AKISDPKVVIDEEKVSTKNVCPVLEKHLNFDE 439


>ref|XP_021969684.1| protein SDE2 homolog [Helianthus annuus]
 gb|OTG22360.1| putative ubiquitin-like superfamily protein [Helianthus annuus]
          Length = 444

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
 Frame = -1

Query: 305 LGSINESNDKV-----VDASVGHEESIVNNVIDNSTVSFEMEKLTKPELSDSEEKQSEPP 141
           LGSI +SND+V     VD SV H+ESIVNN    ST SF +E           EKQ E  
Sbjct: 298 LGSIKDSNDRVTSHEVVDVSVKHDESIVNN----STDSFPLE-----------EKQCELQ 342

Query: 140 ISSNVQEVETTDVEANSSDAKEVINEEKVSTNSNCPELEKPLNFDE 3
             SN QE  TTD EA  SD+K +I++E VST ++C ++ KPLNF+E
Sbjct: 343 SVSNGQEAGTTDGEATISDSKVLIDKENVSTKTDCVDVLKPLNFNE 388


>ref|XP_023746397.1| replication stress response regulator SDE2 [Lactuca sativa]
 gb|PLY64241.1| hypothetical protein LSAT_7X1281 [Lactuca sativa]
          Length = 441

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
 Frame = -1

Query: 308 QLGSINESNDKV-----VDASVGHEESIVNNVIDNSTVSFEMEKLTKPELSDSEEKQSEP 144
           Q+ SI +SND+      VDAS+ HEESIVN   + + +  E EK TK E  D EEK+ E 
Sbjct: 299 QVRSIKDSNDEPPHHEGVDASMIHEESIVN---ETTVLGVESEKSTKAEFGDLEEKECEL 355

Query: 143 PISSNVQEVETTDVEANSSDAKEVINEEKVSTNSNCPELEKPLNFDE 3
           P +SNVQ     DVE   SD+K  +             LEKP+NF+E
Sbjct: 356 PSASNVQ----NDVEEKISDSKLGV-------------LEKPINFEE 385


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